RNA–Protein interactions for RNA: ENST00000615838.1

SDCBP2-206, Transcript of syndecan binding protein 2, humanhuman

TSL 2

Gene SDCBP2, Length 1,096 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-206ENST00000615838 YTHDC2Q9H6S0 1430 aaKnown RBP24.7■■□□□ 1.55
SDCBP2-206ENST00000615838 ORAI2Q96SN7 254 aa24.7■■□□□ 1.54
SDCBP2-206ENST00000615838 PLEKHH1Q9ULM0 1364 aa24.69■■□□□ 1.54
SDCBP2-206ENST00000615838 C14orf93Q9H972 538 aaKnown RBP24.69■■□□□ 1.54
SDCBP2-206ENST00000615838 CFAP70Q5T0N1 1121 aa24.68■■□□□ 1.54
SDCBP2-206ENST00000615838 MEX3CQ5U5Q3 659 aaKnown RBP24.68■■□□□ 1.54
SDCBP2-206ENST00000615838 NUTM2BA6NNL0 878 aaPredicted RBP24.67■■□□□ 1.54
SDCBP2-206ENST00000615838 NUTM2EB1AL46 878 aaPredicted RBP24.67■■□□□ 1.54
SDCBP2-206ENST00000615838 NUTM2AQ8IVF1 878 aaPredicted RBP24.67■■□□□ 1.54
SDCBP2-206ENST00000615838 LRRC59Q96AG4 307 aaKnown RBP24.66■■□□□ 1.54
SDCBP2-206ENST00000615838 FMN2Q9NZ56 1722 aa24.65■■□□□ 1.54
SDCBP2-206ENST00000615838 RGPD8O14715 1765 aaPredicted RBP24.65■■□□□ 1.54
SDCBP2-206ENST00000615838 PNPLA6Q8IY17 1366 aa24.63■■□□□ 1.53
SDCBP2-206ENST00000615838 DHX57Q6P158 1386 aaKnown RBP24.62■■□□□ 1.53
SDCBP2-206ENST00000615838 NUTM2FA1L443 756 aa24.61■■□□□ 1.53
SDCBP2-206ENST00000615838 ESCO1Q5FWF5 840 aa24.61■■□□□ 1.53
SDCBP2-206ENST00000615838 KDM2AQ9Y2K7 1162 aa24.61■■□□□ 1.53
SDCBP2-206ENST00000615838 DCAF11Q8TEB1 546 aa24.6■■□□□ 1.53
SDCBP2-206ENST00000615838 SOS2Q07890 1332 aaPredicted RBP24.6■■□□□ 1.53
SDCBP2-206ENST00000615838 SIRT1Q96EB6 747 aa24.58■■□□□ 1.53
SDCBP2-206ENST00000615838 ADGRB1O14514 1584 aa24.58■■□□□ 1.52
SDCBP2-206ENST00000615838 DLC1Q96QB1 1528 aa24.56■■□□□ 1.52
SDCBP2-206ENST00000615838 SAFB2Q14151 953 aaKnown RBP eCLIP24.55■■□□□ 1.52
SDCBP2-206ENST00000615838 ZNF772Q68DY9 489 aaPredicted RBP24.55■■□□□ 1.52
SDCBP2-206ENST00000615838 PRAM1Q96QH2 718 aa24.55■■□□□ 1.52
SDCBP2-206ENST00000615838 KIF1AQ12756 1690 aa24.54■■□□□ 1.52
SDCBP2-206ENST00000615838 PXDNQ92626 1479 aa24.54■■□□□ 1.52
SDCBP2-206ENST00000615838 NPHP3Q7Z494 1330 aa24.54■■□□□ 1.52
SDCBP2-206ENST00000615838 FOXO3O43524 673 aa24.53■■□□□ 1.52
SDCBP2-206ENST00000615838 XPCQ01831 940 aaPredicted RBP24.53■■□□□ 1.52
SDCBP2-206ENST00000615838 COL22A1Q8NFW1 1626 aaPredicted RBP24.53■■□□□ 1.52
SDCBP2-206ENST00000615838 AFF2P51816 1311 aa24.52■■□□□ 1.52
SDCBP2-206ENST00000615838 C8orf37Q96NL8 207 aa24.5■■□□□ 1.51
SDCBP2-206ENST00000615838 POGKQ9P215 609 aa24.5■■□□□ 1.51
SDCBP2-206ENST00000615838 TRAK1Q9UPV9 953 aa24.5■■□□□ 1.51
SDCBP2-206ENST00000615838 ADAMTS2O95450 1211 aa24.49■■□□□ 1.51
SDCBP2-206ENST00000615838 STAC3Q96MF2 364 aa24.49■■□□□ 1.51
SDCBP2-206ENST00000615838 ADGRB2O60241 1585 aa24.48■■□□□ 1.51
SDCBP2-206ENST00000615838 ARHGEF28Q8N1W1 1705 aaKnown RBP24.48■■□□□ 1.51
SDCBP2-206ENST00000615838 MARF1Q9Y4F3 1742 aaKnown RBP24.47■■□□□ 1.51
SDCBP2-206ENST00000615838 USP32Q8NFA0 1604 aa24.47■■□□□ 1.51
SDCBP2-206ENST00000615838 KIAA1210Q9ULL0 1709 aa24.44■■□□□ 1.5
SDCBP2-206ENST00000615838 HIRIP3Q9BW71 556 aaPredicted RBP24.43■■□□□ 1.5
SDCBP2-206ENST00000615838 MINK1Q8N4C8 1332 aaPredicted RBP24.42■■□□□ 1.5
SDCBP2-206ENST00000615838 RXRBP28702 533 aa24.42■■□□□ 1.5
SDCBP2-206ENST00000615838 NGLY1Q96IV0 654 aa24.42■■□□□ 1.5
SDCBP2-206ENST00000615838 PHF8Q9UPP1 1060 aa24.42■■□□□ 1.5
SDCBP2-206ENST00000615838 KRT28Q7Z3Y7 464 aa24.4■■□□□ 1.5
SDCBP2-206ENST00000615838 ANKARQ7Z5J8 1434 aa24.39■■□□□ 1.5
SDCBP2-206ENST00000615838 QTRT2Q9H974 415 aaKnown RBP24.38■■□□□ 1.49
SDCBP2-206ENST00000615838 SPATA31A3Q5VYP0 1347 aa24.37■■□□□ 1.49
SDCBP2-206ENST00000615838 CDK12Q9NYV4 1490 aaPredicted RBP24.35■■□□□ 1.49
SDCBP2-206ENST00000615838 PMFBP1Q8TBY8 1022 aa24.35■■□□□ 1.49
SDCBP2-206ENST00000615838 TULP4Q9NRJ4 1543 aa24.35■■□□□ 1.49
SDCBP2-206ENST00000615838 TNS3Q68CZ2 1445 aa24.34■■□□□ 1.49
SDCBP2-206ENST00000615838 PRR36Q9H6K5 1346 aa24.34■■□□□ 1.49
SDCBP2-206ENST00000615838 ITSN1Q15811 1721 aa24.33■■□□□ 1.49
SDCBP2-206ENST00000615838 ABCA3Q99758 1704 aa24.33■■□□□ 1.49
SDCBP2-206ENST00000615838 USP21Q9UK80 565 aa24.33■■□□□ 1.49
SDCBP2-206ENST00000615838 TRPM3Q9HCF6 1732 aaPredicted RBP24.32■■□□□ 1.48
SDCBP2-206ENST00000615838 EIF3AQ14152 1382 aaKnown RBP24.32■■□□□ 1.48
SDCBP2-206ENST00000615838 WASLO00401 505 aaPredicted RBP24.32■■□□□ 1.48
SDCBP2-206ENST00000615838 RBM6P78332 1123 aaKnown RBP24.32■■□□□ 1.48
SDCBP2-206ENST00000615838 PSME1Q06323 249 aa24.32■■□□□ 1.48
SDCBP2-206ENST00000615838 NBPF1Q3BBV0 1214 aa24.31■■□□□ 1.48
SDCBP2-206ENST00000615838 FNBP4Q8N3X1 1017 aaPredicted RBP24.31■■□□□ 1.48
SDCBP2-206ENST00000615838 RGS12O14924 1447 aa24.3■■□□□ 1.48
SDCBP2-206ENST00000615838 SIN3AQ96ST3 1273 aa24.3■■□□□ 1.48
SDCBP2-206ENST00000615838 SBNO1A3KN83 1393 aa24.29■■□□□ 1.48
SDCBP2-206ENST00000615838 PLEKHG5O94827 1062 aa24.29■■□□□ 1.48
SDCBP2-206ENST00000615838 LMOD2Q6P5Q4 547 aa24.28■■□□□ 1.48
SDCBP2-206ENST00000615838 ALS2Q96Q42 1657 aa24.27■■□□□ 1.48
SDCBP2-206ENST00000615838 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.27■■□□□ 1.48
SDCBP2-206ENST00000615838 CABLES1Q8TDN4 633 aa24.27■■□□□ 1.48
SDCBP2-206ENST00000615838 L3MBTL2Q969R5 705 aa24.27■■□□□ 1.48
SDCBP2-206ENST00000615838 TRPC5Q9UL62 973 aaPredicted RBP24.27■■□□□ 1.48
SDCBP2-206ENST00000615838 ATRNO75882 1429 aa24.27■■□□□ 1.48
SDCBP2-206ENST00000615838 BCL9LQ86UU0 1499 aa24.26■■□□□ 1.47
SDCBP2-206ENST00000615838 ATP7BP35670 1465 aa24.26■■□□□ 1.47
SDCBP2-206ENST00000615838 NEUROD1Q13562 356 aa24.25■■□□□ 1.47
SDCBP2-206ENST00000615838 ARHGEF10O15013 1369 aa24.25■■□□□ 1.47
SDCBP2-206ENST00000615838 GPRASP1Q5JY77 1395 aa24.24■■□□□ 1.47
SDCBP2-206ENST00000615838 PLCH1Q4KWH8 1693 aa24.24■■□□□ 1.47
SDCBP2-206ENST00000615838 TOPAZ1Q8N9V7 1692 aa24.24■■□□□ 1.47
SDCBP2-206ENST00000615838 QRICH2Q9H0J4 1663 aa24.24■■□□□ 1.47
SDCBP2-206ENST00000615838 HAP1P54257 671 aaPredicted RBP24.23■■□□□ 1.47
SDCBP2-206ENST00000615838 UPF1Q92900 1129 aaKnown RBP eCLIP24.23■■□□□ 1.47
SDCBP2-206ENST00000615838 TRPM1Q7Z4N2 1603 aa24.23■■□□□ 1.47
SDCBP2-206ENST00000615838 NGDNQ8NEJ9 315 aaKnown RBP24.22■■□□□ 1.47
SDCBP2-206ENST00000615838 NUDT16Q96DE0 195 aaKnown RBP24.22■■□□□ 1.47
SDCBP2-206ENST00000615838 CDK19Q9BWU1 502 aa24.22■■□□□ 1.47
SDCBP2-206ENST00000615838 SLIT2O94813 1529 aa24.21■■□□□ 1.47
SDCBP2-206ENST00000615838 NWD2Q9ULI1 1742 aa24.19■■□□□ 1.46
SDCBP2-206ENST00000615838 CRYBG1Q9Y4K1 1723 aa24.18■■□□□ 1.46
SDCBP2-206ENST00000615838 EP400Q96L91 3159 aa24.16■■□□□ 1.46
SDCBP2-206ENST00000615838 CENPJQ9HC77 1338 aaPredicted RBP24.16■■□□□ 1.46
SDCBP2-206ENST00000615838 UNC5CLQ8IV45 518 aa24.16■■□□□ 1.46
SDCBP2-206ENST00000615838 PAK3O75914 559 aaPredicted RBP24.15■■□□□ 1.46
SDCBP2-206ENST00000615838 GLI3P10071 1580 aa24.15■■□□□ 1.46
SDCBP2-206ENST00000615838 GJD4Q96KN9 370 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms