RNA–Protein interactions for RNA: ENST00000615093.1

RAB43-208, Transcript of RAB43, member RAS oncogene family, human

TSL 5 BASIC

Gene RAB43, Length 783 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB43-208	ENST00000615093	DDX17	Q92841	729 aa	Known RBP	31.76	■■■□□ 2.67
RAB43-208	ENST00000615093	WAPL	Q7Z5K2	1190 aa		31.74	■■■□□ 2.67
RAB43-208	ENST00000615093	LRRC59	Q96AG4	307 aa	Known RBP	31.74	■■■□□ 2.67
RAB43-208	ENST00000615093	ORAI2	Q96SN7	254 aa		31.74	■■■□□ 2.67
RAB43-208	ENST00000615093	CFAP70	Q5T0N1	1121 aa		31.72	■■■□□ 2.67
RAB43-208	ENST00000615093	PLEKHH1	Q9ULM0	1364 aa		31.71	■■■□□ 2.67
RAB43-208	ENST00000615093	MEX3C	Q5U5Q3	659 aa	Known RBP	31.68	■■■□□ 2.66
RAB43-208	ENST00000615093	SIRT1	Q96EB6	747 aa		31.68	■■■□□ 2.66
RAB43-208	ENST00000615093	DHX57	Q6P158	1386 aa	Known RBP	31.68	■■■□□ 2.66
RAB43-208	ENST00000615093	PNPLA6	Q8IY17	1366 aa		31.67	■■■□□ 2.66
RAB43-208	ENST00000615093	SOS2	Q07890	1332 aa	Predicted RBP	31.66	■■■□□ 2.66
RAB43-208	ENST00000615093	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.64	■■■□□ 2.66
RAB43-208	ENST00000615093	NUTM2E	B1AL46	878 aa	Predicted RBP	31.64	■■■□□ 2.66
RAB43-208	ENST00000615093	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.64	■■■□□ 2.66
RAB43-208	ENST00000615093	FMN2	Q9NZ56	1722 aa		31.63	■■■□□ 2.65
RAB43-208	ENST00000615093	ESCO1	Q5FWF5	840 aa		31.61	■■■□□ 2.65
RAB43-208	ENST00000615093	DCAF11	Q8TEB1	546 aa		31.6	■■■□□ 2.65
RAB43-208	ENST00000615093	ADGRB1	O14514	1584 aa		31.6	■■■□□ 2.65
RAB43-208	ENST00000615093	STAC3	Q96MF2	364 aa		31.59	■■■□□ 2.65
RAB43-208	ENST00000615093	KDM2A	Q9Y2K7	1162 aa		31.59	■■■□□ 2.65
RAB43-208	ENST00000615093	DLC1	Q96QB1	1528 aa		31.59	■■■□□ 2.65
RAB43-208	ENST00000615093	ZNF772	Q68DY9	489 aa	Predicted RBP	31.58	■■■□□ 2.65
RAB43-208	ENST00000615093	NPHP3	Q7Z494	1330 aa		31.57	■■■□□ 2.64
RAB43-208	ENST00000615093	NUTM2F	A1L443	756 aa		31.57	■■■□□ 2.64
RAB43-208	ENST00000615093	PXDN	Q92626	1479 aa		31.54	■■■□□ 2.64
RAB43-208	ENST00000615093	PRAM1	Q96QH2	718 aa		31.54	■■■□□ 2.64
RAB43-208	ENST00000615093	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.51	■■■□□ 2.63
RAB43-208	ENST00000615093	FOXO3	O43524	673 aa		31.51	■■■□□ 2.63
RAB43-208	ENST00000615093	KIF1A	Q12756	1690 aa		31.51	■■■□□ 2.63
RAB43-208	ENST00000615093	AFF2	P51816	1311 aa		31.49	■■■□□ 2.63
RAB43-208	ENST00000615093	RGPD8	O14715	1765 aa	Predicted RBP	31.49	■■■□□ 2.63
RAB43-208	ENST00000615093	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.49	■■■□□ 2.63
RAB43-208	ENST00000615093	POGK	Q9P215	609 aa		31.48	■■■□□ 2.63
RAB43-208	ENST00000615093	TRAK1	Q9UPV9	953 aa		31.47	■■■□□ 2.63
RAB43-208	ENST00000615093	ADGRB2	O60241	1585 aa		31.47	■■■□□ 2.63
RAB43-208	ENST00000615093	C8orf37	Q96NL8	207 aa		31.46	■■■□□ 2.63
RAB43-208	ENST00000615093	XPC	Q01831	940 aa	Predicted RBP	31.45	■■■□□ 2.63
RAB43-208	ENST00000615093	ADAMTS2	O95450	1211 aa		31.43	■■■□□ 2.62
RAB43-208	ENST00000615093	USP32	Q8NFA0	1604 aa		31.4	■■■□□ 2.62
RAB43-208	ENST00000615093	PHF8	Q9UPP1	1060 aa		31.4	■■■□□ 2.62
RAB43-208	ENST00000615093	RXRB	P28702	533 aa		31.39	■■■□□ 2.62
RAB43-208	ENST00000615093	ANKAR	Q7Z5J8	1434 aa		31.39	■■■□□ 2.62
RAB43-208	ENST00000615093	NGLY1	Q96IV0	654 aa		31.38	■■■□□ 2.61
RAB43-208	ENST00000615093	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.38	■■■□□ 2.61
RAB43-208	ENST00000615093	KIAA1210	Q9ULL0	1709 aa		31.38	■■■□□ 2.61
RAB43-208	ENST00000615093	KRT28	Q7Z3Y7	464 aa		31.36	■■■□□ 2.61
RAB43-208	ENST00000615093	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.35	■■■□□ 2.61
RAB43-208	ENST00000615093	SPATA31A3	Q5VYP0	1347 aa		31.35	■■■□□ 2.61
RAB43-208	ENST00000615093	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.35	■■■□□ 2.61
RAB43-208	ENST00000615093	MARF1	Q9Y4F3	1742 aa	Known RBP	31.35	■■■□□ 2.61
RAB43-208	ENST00000615093	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.34	■■■□□ 2.61
RAB43-208	ENST00000615093	QTRT2	Q9H974	415 aa	Known RBP	31.33	■■■□□ 2.61
RAB43-208	ENST00000615093	EIF3A	Q14152	1382 aa	Known RBP	31.3	■■■□□ 2.6
RAB43-208	ENST00000615093	TULP4	Q9NRJ4	1543 aa		31.3	■■■□□ 2.6
RAB43-208	ENST00000615093	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.3	■■■□□ 2.6
RAB43-208	ENST00000615093	WASL	O00401	505 aa	Predicted RBP	31.29	■■■□□ 2.6
RAB43-208	ENST00000615093	PSME1	Q06323	249 aa		31.29	■■■□□ 2.6
RAB43-208	ENST00000615093	TNS3	Q68CZ2	1445 aa		31.29	■■■□□ 2.6
RAB43-208	ENST00000615093	RBM6	P78332	1123 aa	Known RBP	31.28	■■■□□ 2.6
RAB43-208	ENST00000615093	USP21	Q9UK80	565 aa		31.28	■■■□□ 2.6
RAB43-208	ENST00000615093	PRR36	Q9H6K5	1346 aa		31.27	■■■□□ 2.6
RAB43-208	ENST00000615093	PMFBP1	Q8TBY8	1022 aa		31.27	■■■□□ 2.6
RAB43-208	ENST00000615093	SBNO1	A3KN83	1393 aa		31.27	■■■□□ 2.6
RAB43-208	ENST00000615093	NBPF1	Q3BBV0	1214 aa		31.23	■■■□□ 2.59
RAB43-208	ENST00000615093	RGS12	O14924	1447 aa		31.22	■■■□□ 2.59
RAB43-208	ENST00000615093	TRPC5	Q9UL62	973 aa	Predicted RBP	31.21	■■■□□ 2.59
RAB43-208	ENST00000615093	ATRN	O75882	1429 aa		31.21	■■■□□ 2.59
RAB43-208	ENST00000615093	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.21	■■■□□ 2.59
RAB43-208	ENST00000615093	L3MBTL2	Q969R5	705 aa		31.2	■■■□□ 2.59
RAB43-208	ENST00000615093	SIN3A	Q96ST3	1273 aa		31.2	■■■□□ 2.59
RAB43-208	ENST00000615093	BCL9L	Q86UU0	1499 aa		31.2	■■■□□ 2.58
RAB43-208	ENST00000615093	ARHGEF10	O15013	1369 aa		31.18	■■■□□ 2.58
RAB43-208	ENST00000615093	ITSN1	Q15811	1721 aa		31.18	■■■□□ 2.58
RAB43-208	ENST00000615093	ATP7B	P35670	1465 aa		31.18	■■■□□ 2.58
RAB43-208	ENST00000615093	ABCA3	Q99758	1704 aa		31.18	■■■□□ 2.58
RAB43-208	ENST00000615093	GPRASP1	Q5JY77	1395 aa		31.16	■■■□□ 2.58
RAB43-208	ENST00000615093	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.15	■■■□□ 2.58
RAB43-208	ENST00000615093	LMOD2	Q6P5Q4	547 aa		31.15	■■■□□ 2.58
RAB43-208	ENST00000615093	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.15	■■■□□ 2.58	1e-7	■■■□□ 16.6
RAB43-208	ENST00000615093	ALS2	Q96Q42	1657 aa		31.14	■■■□□ 2.58
RAB43-208	ENST00000615093	CABLES1	Q8TDN4	633 aa		31.14	■■■□□ 2.58
RAB43-208	ENST00000615093	NUDT16	Q96DE0	195 aa	Known RBP	31.14	■■■□□ 2.58
RAB43-208	ENST00000615093	SLIT2	O94813	1529 aa		31.14	■■■□□ 2.57
RAB43-208	ENST00000615093	CDK19	Q9BWU1	502 aa		31.13	■■■□□ 2.57
RAB43-208	ENST00000615093	HAP1	P54257	671 aa	Predicted RBP	31.12	■■■□□ 2.57
RAB43-208	ENST00000615093	NEUROD1	Q13562	356 aa		31.11	■■■□□ 2.57
RAB43-208	ENST00000615093	NGDN	Q8NEJ9	315 aa	Known RBP	31.11	■■■□□ 2.57
RAB43-208	ENST00000615093	TOPAZ1	Q8N9V7	1692 aa		31.09	■■■□□ 2.57
RAB43-208	ENST00000615093	TRPM1	Q7Z4N2	1603 aa		31.09	■■■□□ 2.57
RAB43-208	ENST00000615093	PLEKHG5	O94827	1062 aa		31.08	■■■□□ 2.57
RAB43-208	ENST00000615093	UNC5CL	Q8IV45	518 aa		31.08	■■■□□ 2.57
RAB43-208	ENST00000615093	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.07	■■■□□ 2.56
RAB43-208	ENST00000615093	PLCH1	Q4KWH8	1693 aa		31.06	■■■□□ 2.56
RAB43-208	ENST00000615093	GJD4	Q96KN9	370 aa	Predicted RBP	31.05	■■■□□ 2.56
RAB43-208	ENST00000615093	QRICH2	Q9H0J4	1663 aa		31.05	■■■□□ 2.56
RAB43-208	ENST00000615093	NWD2	Q9ULI1	1742 aa		31.04	■■■□□ 2.56
RAB43-208	ENST00000615093	CCDC61	Q9Y6R9	512 aa		31.03	■■■□□ 2.56
RAB43-208	ENST00000615093	CRYBG1	Q9Y4K1	1723 aa		31.03	■■■□□ 2.56
RAB43-208	ENST00000615093	POLR3A	O14802	1390 aa	Predicted RBP	31.02	■■■□□ 2.56
RAB43-208	ENST00000615093	GLI3	P10071	1580 aa		31	■■■□□ 2.55

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