RNA–Protein interactions for RNA: ENST00000614929.4

SNX21-213, Transcript of sorting nexin family member 21, humanhuman

TSL 5 BASIC

Gene SNX21, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-213ENST00000614929 ORAI2Q96SN7 254 aa28.62■■■□□ 2.17
SNX21-213ENST00000614929 SOS2Q07890 1332 aaPredicted RBP28.61■■■□□ 2.17
SNX21-213ENST00000614929 YTHDC2Q9H6S0 1430 aaKnown RBP28.6■■■□□ 2.17
SNX21-213ENST00000614929 TMEM132EQ6IEE7 984 aa28.58■■■□□ 2.17
SNX21-213ENST00000614929 C14orf93Q9H972 538 aaKnown RBP28.58■■■□□ 2.17
SNX21-213ENST00000614929 STK26Q9P289 416 aa28.58■■■□□ 2.17
SNX21-213ENST00000614929 NUTM2BA6NNL0 878 aaPredicted RBP28.57■■■□□ 2.16
SNX21-213ENST00000614929 NUTM2EB1AL46 878 aaPredicted RBP28.57■■■□□ 2.16
SNX21-213ENST00000614929 HRCP23327 699 aa28.57■■■□□ 2.16
SNX21-213ENST00000614929 NUTM2AQ8IVF1 878 aaPredicted RBP28.57■■■□□ 2.16
SNX21-213ENST00000614929 WAPLQ7Z5K2 1190 aa28.56■■■□□ 2.16
SNX21-213ENST00000614929 SIRT1Q96EB6 747 aa28.56■■■□□ 2.16
SNX21-213ENST00000614929 FMN2Q9NZ56 1722 aa28.56■■■□□ 2.16
SNX21-213ENST00000614929 COL22A1Q8NFW1 1626 aaPredicted RBP28.54■■■□□ 2.16
SNX21-213ENST00000614929 PLEKHH1Q9ULM0 1364 aa28.54■■■□□ 2.16
SNX21-213ENST00000614929 PXDNQ92626 1479 aa28.5■■■□□ 2.15
SNX21-213ENST00000614929 DHX57Q6P158 1386 aaKnown RBP28.5■■■□□ 2.15
SNX21-213ENST00000614929 AFF2P51816 1311 aa28.49■■■□□ 2.15
SNX21-213ENST00000614929 NPHP3Q7Z494 1330 aa28.49■■■□□ 2.15
SNX21-213ENST00000614929 ESCO1Q5FWF5 840 aa28.49■■■□□ 2.15
SNX21-213ENST00000614929 CFAP70Q5T0N1 1121 aa28.49■■■□□ 2.15
SNX21-213ENST00000614929 KIF1AQ12756 1690 aa28.48■■■□□ 2.15
SNX21-213ENST00000614929 CDK12Q9NYV4 1490 aaPredicted RBP28.47■■■□□ 2.15
SNX21-213ENST00000614929 DLC1Q96QB1 1528 aa28.47■■■□□ 2.15
SNX21-213ENST00000614929 ADGRB1O14514 1584 aa28.45■■■□□ 2.15
SNX21-213ENST00000614929 RGPD8O14715 1765 aaPredicted RBP28.45■■■□□ 2.15
SNX21-213ENST00000614929 RXRBP28702 533 aa28.44■■■□□ 2.14
SNX21-213ENST00000614929 C8orf37Q96NL8 207 aa28.43■■■□□ 2.14
SNX21-213ENST00000614929 MARF1Q9Y4F3 1742 aaKnown RBP28.42■■■□□ 2.14
SNX21-213ENST00000614929 FOXO3O43524 673 aa28.41■■■□□ 2.14
SNX21-213ENST00000614929 STAC3Q96MF2 364 aa28.41■■■□□ 2.14
SNX21-213ENST00000614929 NUTM2FA1L443 756 aa28.4■■■□□ 2.14
SNX21-213ENST00000614929 ADGRB2O60241 1585 aa28.39■■■□□ 2.14
SNX21-213ENST00000614929 ADAMTS2O95450 1211 aa28.38■■■□□ 2.13
SNX21-213ENST00000614929 NGLY1Q96IV0 654 aa28.36■■■□□ 2.13
SNX21-213ENST00000614929 PRAM1Q96QH2 718 aa28.36■■■□□ 2.13
SNX21-213ENST00000614929 RBM6P78332 1123 aaKnown RBP28.34■■■□□ 2.13
SNX21-213ENST00000614929 DCAF11Q8TEB1 546 aa28.34■■■□□ 2.13
SNX21-213ENST00000614929 QTRT2Q9H974 415 aaKnown RBP28.34■■■□□ 2.13
SNX21-213ENST00000614929 USP32Q8NFA0 1604 aa28.33■■■□□ 2.13
SNX21-213ENST00000614929 XPCQ01831 940 aaPredicted RBP28.33■■■□□ 2.13
SNX21-213ENST00000614929 FNBP4Q8N3X1 1017 aaPredicted RBP28.33■■■□□ 2.13
SNX21-213ENST00000614929 SPATA31A3Q5VYP0 1347 aa28.31■■■□□ 2.12
SNX21-213ENST00000614929 ANKARQ7Z5J8 1434 aa28.31■■■□□ 2.12
SNX21-213ENST00000614929 RGS12O14924 1447 aa28.3■■■□□ 2.12
SNX21-213ENST00000614929 KDM2AQ9Y2K7 1162 aa28.3■■■□□ 2.12
SNX21-213ENST00000614929 POGKQ9P215 609 aa28.29■■■□□ 2.12
SNX21-213ENST00000614929 PHF8Q9UPP1 1060 aa28.29■■■□□ 2.12
SNX21-213ENST00000614929 SAFB2Q14151 953 aaKnown RBP eCLIP28.28■■■□□ 2.12
SNX21-213ENST00000614929 UPF1Q92900 1129 aaKnown RBP eCLIP28.28■■■□□ 2.12
SNX21-213ENST00000614929 USP21Q9UK80 565 aa28.28■■■□□ 2.12
SNX21-213ENST00000614929 ARHGEF28Q8N1W1 1705 aaKnown RBP28.27■■■□□ 2.12
SNX21-213ENST00000614929 KRT28Q7Z3Y7 464 aa28.27■■■□□ 2.12
SNX21-213ENST00000614929 TRAK1Q9UPV9 953 aa28.26■■■□□ 2.11
SNX21-213ENST00000614929 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.26■■■□□ 2.11
SNX21-213ENST00000614929 KIAA1210Q9ULL0 1709 aa28.26■■■□□ 2.11
SNX21-213ENST00000614929 ATRNO75882 1429 aa28.26■■■□□ 2.11
SNX21-213ENST00000614929 TRPC5Q9UL62 973 aaPredicted RBP28.25■■■□□ 2.11
SNX21-213ENST00000614929 TNS3Q68CZ2 1445 aa28.24■■■□□ 2.11
SNX21-213ENST00000614929 BCL9LQ86UU0 1499 aa28.23■■■□□ 2.11
SNX21-213ENST00000614929 SBNO1A3KN83 1393 aa28.23■■■□□ 2.11
SNX21-213ENST00000614929 EIF3AQ14152 1382 aaKnown RBP28.22■■■□□ 2.11
SNX21-213ENST00000614929 ABCA3Q99758 1704 aa28.21■■■□□ 2.11
SNX21-213ENST00000614929 PSME1Q06323 249 aa28.21■■■□□ 2.11
SNX21-213ENST00000614929 TULP4Q9NRJ4 1543 aa28.21■■■□□ 2.11
SNX21-213ENST00000614929 TRPM3Q9HCF6 1732 aaPredicted RBP28.2■■■□□ 2.1
SNX21-213ENST00000614929 SLIT2O94813 1529 aa28.18■■■□□ 2.1
SNX21-213ENST00000614929 MINK1Q8N4C8 1332 aaPredicted RBP28.18■■■□□ 2.1
SNX21-213ENST00000614929 WASLO00401 505 aaPredicted RBP28.16■■■□□ 2.1
SNX21-213ENST00000614929 HIRIP3Q9BW71 556 aaPredicted RBP28.16■■■□□ 2.1
SNX21-213ENST00000614929 PRR36Q9H6K5 1346 aa28.16■■■□□ 2.1
SNX21-213ENST00000614929 ITSN1Q15811 1721 aa28.15■■■□□ 2.1
SNX21-213ENST00000614929 ARHGEF10O15013 1369 aa28.15■■■□□ 2.1
SNX21-213ENST00000614929 ALS2Q96Q42 1657 aa28.15■■■□□ 2.1
SNX21-213ENST00000614929 PMFBP1Q8TBY8 1022 aa28.14■■■□□ 2.1
SNX21-213ENST00000614929 NWD2Q9ULI1 1742 aa28.13■■■□□ 2.09
SNX21-213ENST00000614929 PLCH1Q4KWH8 1693 aa28.11■■■□□ 2.09
SNX21-213ENST00000614929 ATP7BP35670 1465 aa28.09■■■□□ 2.09
SNX21-213ENST00000614929 UNC5CLQ8IV45 518 aa28.09■■■□□ 2.09
SNX21-213ENST00000614929 GJD4Q96KN9 370 aaPredicted RBP28.09■■■□□ 2.09
SNX21-213ENST00000614929 GLI3P10071 1580 aa28.08■■■□□ 2.09
SNX21-213ENST00000614929 ATAD2Q6PL18 1390 aa28.08■■■□□ 2.09
SNX21-213ENST00000614929 CABLES1Q8TDN4 633 aa28.07■■■□□ 2.08
SNX21-213ENST00000614929 GPRASP1Q5JY77 1395 aa28.07■■■□□ 2.08
SNX21-213ENST00000614929 EP400Q96L91 3159 aa28.07■■■□□ 2.08
SNX21-213ENST00000614929 TOPAZ1Q8N9V7 1692 aa28.06■■■□□ 2.08
SNX21-213ENST00000614929 CRYBG1Q9Y4K1 1723 aa28.06■■■□□ 2.08
SNX21-213ENST00000614929 RALGAPBQ86X10 1494 aa28.04■■■□□ 2.08
SNX21-213ENST00000614929 HAP1P54257 671 aaPredicted RBP28.04■■■□□ 2.08
SNX21-213ENST00000614929 LMOD2Q6P5Q4 547 aa28.03■■■□□ 2.08
SNX21-213ENST00000614929 NBPF1Q3BBV0 1214 aa28.01■■■□□ 2.07
SNX21-213ENST00000614929 NUDT16Q96DE0 195 aaKnown RBP28.01■■■□□ 2.07
SNX21-213ENST00000614929 NRAPQ86VF7 1730 aa28■■■□□ 2.07
SNX21-213ENST00000614929 NGDNQ8NEJ9 315 aaKnown RBP27.99■■■□□ 2.07
SNX21-213ENST00000614929 BRWD3Q6RI45 1802 aa27.99■■■□□ 2.07
SNX21-213ENST00000614929 VPS72Q15906 364 aa27.98■■■□□ 2.07
SNX21-213ENST00000614929 CDK19Q9BWU1 502 aa27.98■■■□□ 2.07
SNX21-213ENST00000614929 COL14A1Q05707 1796 aaKnown RBP27.98■■■□□ 2.07
SNX21-213ENST00000614929 POLR3AO14802 1390 aaPredicted RBP27.96■■■□□ 2.07
SNX21-213ENST00000614929 FAM83GA6ND36 823 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms