RNA–Protein interactions for RNA: ENST00000613953.4

TPI1-210, Transcript of triosephosphate isomerase 1, humanhuman

TSL 1 (best) BASIC

Gene TPI1, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPI1-210ENST00000613953 KNDC1Q76NI1 1749 aa34.83■■■■□ 3.17
TPI1-210ENST00000613953 PNPLA6Q8IY17 1366 aa34.82■■■■□ 3.16
TPI1-210ENST00000613953 NUTM2BA6NNL0 878 aaPredicted RBP34.82■■■■□ 3.16
TPI1-210ENST00000613953 NUTM2EB1AL46 878 aaPredicted RBP34.82■■■■□ 3.16
TPI1-210ENST00000613953 NUTM2AQ8IVF1 878 aaPredicted RBP34.82■■■■□ 3.16
TPI1-210ENST00000613953 YTHDC2Q9H6S0 1430 aaKnown RBP34.8■■■■□ 3.16
TPI1-210ENST00000613953 ZNF772Q68DY9 489 aaPredicted RBP34.79■■■■□ 3.16
TPI1-210ENST00000613953 WAPLQ7Z5K2 1190 aa34.79■■■■□ 3.16
TPI1-210ENST00000613953 C14orf93Q9H972 538 aaKnown RBP34.78■■■■□ 3.16
TPI1-210ENST00000613953 SOS2Q07890 1332 aaPredicted RBP34.78■■■■□ 3.16
TPI1-210ENST00000613953 PLEKHH1Q9ULM0 1364 aa34.76■■■■□ 3.16
TPI1-210ENST00000613953 HRCP23327 699 aa34.76■■■■□ 3.15
TPI1-210ENST00000613953 CFAP70Q5T0N1 1121 aa34.71■■■■□ 3.15
TPI1-210ENST00000613953 ESCO1Q5FWF5 840 aa34.71■■■■□ 3.15
TPI1-210ENST00000613953 SIRT1Q96EB6 747 aa34.71■■■■□ 3.15
TPI1-210ENST00000613953 DHX57Q6P158 1386 aaKnown RBP34.68■■■■□ 3.14
TPI1-210ENST00000613953 NPHP3Q7Z494 1330 aa34.68■■■■□ 3.14
TPI1-210ENST00000613953 AFF2P51816 1311 aa34.67■■■■□ 3.14
TPI1-210ENST00000613953 PXDNQ92626 1479 aa34.64■■■■□ 3.14
TPI1-210ENST00000613953 FMN2Q9NZ56 1722 aa34.64■■■■□ 3.14
TPI1-210ENST00000613953 NUTM2FA1L443 756 aa34.63■■■■□ 3.13
TPI1-210ENST00000613953 C8orf37Q96NL8 207 aa34.63■■■■□ 3.13
TPI1-210ENST00000613953 COL22A1Q8NFW1 1626 aaPredicted RBP34.6■■■■□ 3.13
TPI1-210ENST00000613953 FOXO3O43524 673 aa34.59■■■■□ 3.13
TPI1-210ENST00000613953 ADGRB1O14514 1584 aa34.59■■■■□ 3.13
TPI1-210ENST00000613953 DLC1Q96QB1 1528 aa34.59■■■■□ 3.13
TPI1-210ENST00000613953 RXRBP28702 533 aa34.58■■■■□ 3.13
TPI1-210ENST00000613953 ADAMTS2O95450 1211 aa34.58■■■■□ 3.13
TPI1-210ENST00000613953 PRAM1Q96QH2 718 aa34.57■■■■□ 3.12
TPI1-210ENST00000613953 DCAF11Q8TEB1 546 aa34.56■■■■□ 3.12
TPI1-210ENST00000613953 XPCQ01831 940 aaPredicted RBP34.55■■■■□ 3.12
TPI1-210ENST00000613953 KIF1AQ12756 1690 aa34.54■■■■□ 3.12
TPI1-210ENST00000613953 CDK12Q9NYV4 1490 aaPredicted RBP34.54■■■■□ 3.12
TPI1-210ENST00000613953 STAC3Q96MF2 364 aa34.54■■■■□ 3.12
TPI1-210ENST00000613953 KDM2AQ9Y2K7 1162 aa34.53■■■■□ 3.12
TPI1-210ENST00000613953 NGLY1Q96IV0 654 aa34.52■■■■□ 3.12
TPI1-210ENST00000613953 SAFB2Q14151 953 aaKnown RBP eCLIP34.52■■■■□ 3.12
TPI1-210ENST00000613953 POGKQ9P215 609 aa34.49■■■■□ 3.11
TPI1-210ENST00000613953 QTRT2Q9H974 415 aaKnown RBP34.48■■■■□ 3.11
TPI1-210ENST00000613953 ADGRB2O60241 1585 aa34.47■■■■□ 3.11
TPI1-210ENST00000613953 TRAK1Q9UPV9 953 aa34.46■■■■□ 3.11
TPI1-210ENST00000613953 RBM6P78332 1123 aaKnown RBP34.45■■■■□ 3.1
TPI1-210ENST00000613953 PHF8Q9UPP1 1060 aa34.45■■■■□ 3.1
TPI1-210ENST00000613953 FNBP4Q8N3X1 1017 aaPredicted RBP34.43■■■■□ 3.1
TPI1-210ENST00000613953 SPATA31A3Q5VYP0 1347 aa34.43■■■■□ 3.1
TPI1-210ENST00000613953 ANKARQ7Z5J8 1434 aa34.42■■■■□ 3.1
TPI1-210ENST00000613953 USP21Q9UK80 565 aa34.41■■■■□ 3.1
TPI1-210ENST00000613953 RGPD8O14715 1765 aaPredicted RBP34.4■■■■□ 3.1
TPI1-210ENST00000613953 KRT28Q7Z3Y7 464 aa34.4■■■■□ 3.1
TPI1-210ENST00000613953 RGS12O14924 1447 aa34.4■■■■□ 3.1
TPI1-210ENST00000613953 USP32Q8NFA0 1604 aa34.38■■■■□ 3.09
TPI1-210ENST00000613953 HIRIP3Q9BW71 556 aaPredicted RBP34.36■■■■□ 3.09
TPI1-210ENST00000613953 TNS3Q68CZ2 1445 aa34.36■■■■□ 3.09
TPI1-210ENST00000613953 UPF1Q92900 1129 aaKnown RBP eCLIP34.35■■■■□ 3.092e-9■■■■■ 50.2
TPI1-210ENST00000613953 TRPC5Q9UL62 973 aaPredicted RBP34.35■■■■□ 3.09
TPI1-210ENST00000613953 PSME1Q06323 249 aa34.34■■■■□ 3.09
TPI1-210ENST00000613953 MARF1Q9Y4F3 1742 aaKnown RBP34.34■■■■□ 3.09
TPI1-210ENST00000613953 EIF3AQ14152 1382 aaKnown RBP34.34■■■■□ 3.09
TPI1-210ENST00000613953 MINK1Q8N4C8 1332 aaPredicted RBP34.34■■■■□ 3.09
TPI1-210ENST00000613953 ATRNO75882 1429 aa34.32■■■■□ 3.09
TPI1-210ENST00000613953 SBNO1A3KN83 1393 aa34.32■■■■□ 3.08
TPI1-210ENST00000613953 BCL9LQ86UU0 1499 aa34.31■■■■□ 3.08
TPI1-210ENST00000613953 TULP4Q9NRJ4 1543 aa34.31■■■■□ 3.08
TPI1-210ENST00000613953 ARHGEF28Q8N1W1 1705 aaKnown RBP34.29■■■■□ 3.08
TPI1-210ENST00000613953 WASLO00401 505 aaPredicted RBP34.28■■■■□ 3.08
TPI1-210ENST00000613953 PMFBP1Q8TBY8 1022 aa34.28■■■■□ 3.08
TPI1-210ENST00000613953 PRR36Q9H6K5 1346 aa34.27■■■■□ 3.08
TPI1-210ENST00000613953 ARHGEF10O15013 1369 aa34.26■■■■□ 3.07
TPI1-210ENST00000613953 KIAA1210Q9ULL0 1709 aa34.25■■■■□ 3.07
TPI1-210ENST00000613953 SLIT2O94813 1529 aa34.22■■■■□ 3.07
TPI1-210ENST00000613953 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.2■■■■□ 3.07
TPI1-210ENST00000613953 HAP1P54257 671 aaPredicted RBP34.2■■■■□ 3.06
TPI1-210ENST00000613953 LMOD2Q6P5Q4 547 aa34.2■■■■□ 3.06
TPI1-210ENST00000613953 CABLES1Q8TDN4 633 aa34.2■■■■□ 3.06
TPI1-210ENST00000613953 TRPM3Q9HCF6 1732 aaPredicted RBP34.19■■■■□ 3.06
TPI1-210ENST00000613953 GPRASP1Q5JY77 1395 aa34.19■■■■□ 3.06
TPI1-210ENST00000613953 UNC5CLQ8IV45 518 aa34.17■■■■□ 3.06
TPI1-210ENST00000613953 ATP7BP35670 1465 aa34.17■■■■□ 3.06
TPI1-210ENST00000613953 ABCA3Q99758 1704 aa34.17■■■■□ 3.06
TPI1-210ENST00000613953 GJD4Q96KN9 370 aaPredicted RBP34.15■■■■□ 3.06
TPI1-210ENST00000613953 EP400Q96L91 3159 aa34.15■■■■□ 3.06
TPI1-210ENST00000613953 ATAD2Q6PL18 1390 aa34.14■■■■□ 3.06
TPI1-210ENST00000613953 PLEKHG5O94827 1062 aa34.14■■■■□ 3.06
TPI1-210ENST00000613953 NBPF1Q3BBV0 1214 aa34.14■■■■□ 3.06
TPI1-210ENST00000613953 NGDNQ8NEJ9 315 aaKnown RBP34.12■■■■□ 3.05
TPI1-210ENST00000613953 ALS2Q96Q42 1657 aa34.12■■■■□ 3.05
TPI1-210ENST00000613953 ITSN1Q15811 1721 aa34.11■■■■□ 3.05
TPI1-210ENST00000613953 NUDT16Q96DE0 195 aaKnown RBP34.11■■■■□ 3.05
TPI1-210ENST00000613953 RALGAPBQ86X10 1494 aa34.09■■■■□ 3.05
TPI1-210ENST00000613953 CDK19Q9BWU1 502 aa34.08■■■■□ 3.05
TPI1-210ENST00000613953 GLI3P10071 1580 aa34.08■■■■□ 3.05
TPI1-210ENST00000613953 PLCH1Q4KWH8 1693 aa34.07■■■■□ 3.04
TPI1-210ENST00000613953 NWD2Q9ULI1 1742 aa34.06■■■■□ 3.04
TPI1-210ENST00000613953 L3MBTL2Q969R5 705 aa34.06■■■■□ 3.04
TPI1-210ENST00000613953 TOPAZ1Q8N9V7 1692 aa34.03■■■■□ 3.04
TPI1-210ENST00000613953 VPS72Q15906 364 aa34.02■■■■□ 3.04
TPI1-210ENST00000613953 SIN3AQ96ST3 1273 aa34.02■■■■□ 3.04
TPI1-210ENST00000613953 FAM83GA6ND36 823 aa34.01■■■■□ 3.04
TPI1-210ENST00000613953 PAK3O75914 559 aaPredicted RBP34.01■■■■□ 3.04
TPI1-210ENST00000613953 CCDC61Q9Y6R9 512 aa34.01■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms