RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 GOLGA6L3A6NEY3 463 aa17.4■□□□□ 0.38
HPS1-215ENST00000613394 IPO8O15397 1037 aaKnown RBP17.4■□□□□ 0.38
HPS1-215ENST00000613394 MVPQ14764 893 aaKnown RBP17.4■□□□□ 0.38
HPS1-215ENST00000613394 L1TD1Q5T7N2 865 aaKnown RBP17.39■□□□□ 0.38
HPS1-215ENST00000613394 TBC1D2Q9BYX2 928 aa17.39■□□□□ 0.38
HPS1-215ENST00000613394 CROCC2H7BZ55 1655 aa17.39■□□□□ 0.38
HPS1-215ENST00000613394 NOS1P29475 1434 aa17.39■□□□□ 0.37
HPS1-215ENST00000613394 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
HPS1-215ENST00000613394 VGFO15240 615 aaPredicted RBP17.39■□□□□ 0.37
HPS1-215ENST00000613394 HDGFL2Q7Z4V5 671 aaPredicted RBP17.38■□□□□ 0.37
HPS1-215ENST00000613394 SSH1Q8WYL5 1049 aa17.38■□□□□ 0.37
HPS1-215ENST00000613394 TERF2IPQ9NYB0 399 aa17.38■□□□□ 0.37
HPS1-215ENST00000613394 ARHGEF5Q12774 1597 aa17.38■□□□□ 0.37
HPS1-215ENST00000613394 TRPM1Q7Z4N2 1603 aa17.38■□□□□ 0.37
HPS1-215ENST00000613394 WDR63Q8IWG1 891 aa17.38■□□□□ 0.37
HPS1-215ENST00000613394 THUMPD2Q9BTF0 503 aaKnown RBP17.37■□□□□ 0.37
HPS1-215ENST00000613394 DDX19BQ9UMR2 479 aa17.37■□□□□ 0.37
HPS1-215ENST00000613394 PIK3C2GO75747 1445 aa17.37■□□□□ 0.37
HPS1-215ENST00000613394 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
HPS1-215ENST00000613394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.37■□□□□ 0.37
HPS1-215ENST00000613394 DIAPH1O60610 1272 aaKnown RBP17.36■□□□□ 0.37
HPS1-215ENST00000613394 TPRNQ4KMQ1 711 aa17.36■□□□□ 0.37
HPS1-215ENST00000613394 TTC37Q6PGP7 1564 aa17.36■□□□□ 0.37
HPS1-215ENST00000613394 NUTM2FA1L443 756 aa17.36■□□□□ 0.37
HPS1-215ENST00000613394 TMEM57Q8N5G2 664 aa17.35■□□□□ 0.37
HPS1-215ENST00000613394 TRIM44Q96DX7 344 aaPredicted RBP17.35■□□□□ 0.37
HPS1-215ENST00000613394 ADCY10Q96PN6 1610 aa17.35■□□□□ 0.37
HPS1-215ENST00000613394 PRDM15P57071 1507 aaPredicted RBP17.35■□□□□ 0.37
HPS1-215ENST00000613394 EIF2AK4Q9P2K8 1649 aaKnown RBP17.35■□□□□ 0.37
HPS1-215ENST00000613394 TRIM27P14373 513 aa17.34■□□□□ 0.37
HPS1-215ENST00000613394 TRMT2AQ8IZ69 625 aaKnown RBP17.34■□□□□ 0.37
HPS1-215ENST00000613394 ERCC6L2Q5T890 1561 aa17.34■□□□□ 0.37
HPS1-215ENST00000613394 TMPOP42166 694 aaKnown RBP17.34■□□□□ 0.37
HPS1-215ENST00000613394 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
HPS1-215ENST00000613394 PRAM1Q96QH2 718 aa17.33■□□□□ 0.37
HPS1-215ENST00000613394 CFAP65Q6ZU64 1925 aaKnown RBP17.33■□□□□ 0.37
HPS1-215ENST00000613394 ATF7IPQ6VMQ6 1270 aa17.33■□□□□ 0.36
HPS1-215ENST00000613394 PLEKHG5O94827 1062 aa17.33■□□□□ 0.36
HPS1-215ENST00000613394 PRKAR2BP31323 418 aa17.32■□□□□ 0.36
HPS1-215ENST00000613394 CHMP5Q9NZZ3 219 aa17.32■□□□□ 0.36
HPS1-215ENST00000613394 TBC1D32Q96NH3 1257 aa17.31■□□□□ 0.36
HPS1-215ENST00000613394 UGGT1Q9NYU2 1555 aa17.31■□□□□ 0.36
HPS1-215ENST00000613394 MAST1Q9Y2H9 1570 aa17.31■□□□□ 0.36
HPS1-215ENST00000613394 ANP32BQ92688 251 aaKnown RBP17.31■□□□□ 0.36
HPS1-215ENST00000613394 TRAK2O60296 914 aa17.3■□□□□ 0.36
HPS1-215ENST00000613394 PNNQ9H307 717 aaKnown RBP17.3■□□□□ 0.36
HPS1-215ENST00000613394 ESF1Q9H501 851 aaKnown RBP17.3■□□□□ 0.36
HPS1-215ENST00000613394 CABP1Q9NZU7 370 aa17.3■□□□□ 0.36
HPS1-215ENST00000613394 FANCAO15360 1455 aa17.3■□□□□ 0.36
HPS1-215ENST00000613394 C14orf93Q9H972 538 aaKnown RBP17.3■□□□□ 0.36
HPS1-215ENST00000613394 ATP10AO60312 1499 aa17.29■□□□□ 0.36
HPS1-215ENST00000613394 ADGRL1O94910 1474 aa17.29■□□□□ 0.36
HPS1-215ENST00000613394 INSRP06213 1382 aa17.29■□□□□ 0.36
HPS1-215ENST00000613394 CDC42BPBQ9Y5S2 1711 aa17.28■□□□□ 0.36
HPS1-215ENST00000613394 POLR3AO14802 1390 aaPredicted RBP17.28■□□□□ 0.36
HPS1-215ENST00000613394 MCM4P33991 863 aa17.28■□□□□ 0.36
HPS1-215ENST00000613394 GOLGA6L22H0YM25 854 aa17.28■□□□□ 0.36
HPS1-215ENST00000613394 PREX2Q70Z35 1606 aa17.27■□□□□ 0.36
HPS1-215ENST00000613394 NINLQ9Y2I6 1382 aa17.27■□□□□ 0.36
HPS1-215ENST00000613394 FOXD4L5Q5VV16 416 aaPredicted RBP17.26■□□□□ 0.35
HPS1-215ENST00000613394 FOXD4L4Q8WXT5 416 aaPredicted RBP17.26■□□□□ 0.35
HPS1-215ENST00000613394 USP19O94966 1318 aa17.26■□□□□ 0.35
HPS1-215ENST00000613394 IDI1Q13907 227 aa17.25■□□□□ 0.35
HPS1-215ENST00000613394 GBP4Q96PP9 640 aa17.24■□□□□ 0.35
HPS1-215ENST00000613394 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
HPS1-215ENST00000613394 AAMPQ13685 434 aa17.24■□□□□ 0.35
HPS1-215ENST00000613394 PANK2Q9BZ23 570 aa17.24■□□□□ 0.35
HPS1-215ENST00000613394 NPC1L1Q9UHC9 1359 aa17.24■□□□□ 0.35
HPS1-215ENST00000613394 ERVK-7P63135 1459 aa17.24■□□□□ 0.35
HPS1-215ENST00000613394 ABCC2Q92887 1545 aa17.24■□□□□ 0.35
HPS1-215ENST00000613394 CHD1O14646 1710 aa17.23■□□□□ 0.35
HPS1-215ENST00000613394 SLC4A10Q6U841 1118 aa17.23■□□□□ 0.35
HPS1-215ENST00000613394 CDK19Q9BWU1 502 aa17.23■□□□□ 0.35
HPS1-215ENST00000613394 NOL8Q76FK4 1167 aaKnown RBP17.22■□□□□ 0.35
HPS1-215ENST00000613394 DCTN1Q14203 1278 aa17.22■□□□□ 0.35
HPS1-215ENST00000613394 WAPLQ7Z5K2 1190 aa17.22■□□□□ 0.35
HPS1-215ENST00000613394 CHD1LQ86WJ1 897 aa17.21■□□□□ 0.35
HPS1-215ENST00000613394 ZBTB7CA1YPR0 619 aa17.21■□□□□ 0.35
HPS1-215ENST00000613394 PTPRTO14522 1441 aa17.2■□□□□ 0.34
HPS1-215ENST00000613394 DDX11L8A8MPP1 907 aa17.2■□□□□ 0.34
HPS1-215ENST00000613394 FYB1O15117 783 aa17.2■□□□□ 0.34
HPS1-215ENST00000613394 FAM43AQ8N2R8 423 aa17.2■□□□□ 0.34
HPS1-215ENST00000613394 E9PCH4 1651 aa17.2■□□□□ 0.34
HPS1-215ENST00000613394 FBXO31Q5XUX0 539 aaPredicted RBP17.19■□□□□ 0.34
HPS1-215ENST00000613394 RRS1Q15050 365 aaKnown RBP17.19■□□□□ 0.34
HPS1-215ENST00000613394 CHMP4BQ9H444 224 aaKnown RBP17.19■□□□□ 0.34
HPS1-215ENST00000613394 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
HPS1-215ENST00000613394 FOXD4L6Q3SYB3 417 aaPredicted RBP17.18■□□□□ 0.34
HPS1-215ENST00000613394 FOXD4L3Q6VB84 417 aaPredicted RBP17.18■□□□□ 0.34
HPS1-215ENST00000613394 EMILIN1Q9Y6C2 1016 aa17.18■□□□□ 0.34
HPS1-215ENST00000613394 DDX49Q9Y6V7 483 aaKnown RBP17.18■□□□□ 0.34
HPS1-215ENST00000613394 MYO5CQ9NQX4 1742 aa17.18■□□□□ 0.34
HPS1-215ENST00000613394 IQGAP3Q86VI3 1631 aa17.18■□□□□ 0.34
HPS1-215ENST00000613394 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
HPS1-215ENST00000613394 RSPH6AQ9H0K4 717 aa17.18■□□□□ 0.34
HPS1-215ENST00000613394 XRCC6P12956 609 aaKnown RBP eCLIP17.17■□□□□ 0.34
HPS1-215ENST00000613394 TWISTNBQ3B726 338 aaPredicted RBP17.17■□□□□ 0.34
HPS1-215ENST00000613394 TRIM35Q9UPQ4 493 aa17.17■□□□□ 0.34
HPS1-215ENST00000613394 UNC13BO14795 1591 aa17.16■□□□□ 0.34
HPS1-215ENST00000613394 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms