RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, humanhuman

Gene CCND3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-222ENST00000612455 CDC42BPGQ6DT37 1551 aa24.21■■□□□ 1.47
CCND3-222ENST00000612455 L3MBTL2Q969R5 705 aa24.2■■□□□ 1.46
CCND3-222ENST00000612455 MED1Q15648 1581 aaPredicted RBP24.2■■□□□ 1.46
CCND3-222ENST00000612455 KIAA1210Q9ULL0 1709 aa24.18■■□□□ 1.46
CCND3-222ENST00000612455 PRAM1Q96QH2 718 aa24.18■■□□□ 1.46
CCND3-222ENST00000612455 ORAI2Q96SN7 254 aa24.17■■□□□ 1.46
CCND3-222ENST00000612455 TRAK1Q9UPV9 953 aa24.17■■□□□ 1.46
CCND3-222ENST00000612455 NHSL1Q5SYE7 1610 aa24.17■■□□□ 1.46
CCND3-222ENST00000612455 JCADQ9P266 1359 aa24.16■■□□□ 1.46
CCND3-222ENST00000612455 NEUROD1Q13562 356 aa24.16■■□□□ 1.46
CCND3-222ENST00000612455 POGKQ9P215 609 aa24.13■■□□□ 1.45
CCND3-222ENST00000612455 NBPF1Q3BBV0 1214 aa24.12■■□□□ 1.45
CCND3-222ENST00000612455 FMN2Q9NZ56 1722 aa24.12■■□□□ 1.45
CCND3-222ENST00000612455 DDX17Q92841 729 aaKnown RBP24.11■■□□□ 1.45
CCND3-222ENST00000612455 SAFB2Q14151 953 aaKnown RBP eCLIP24.1■■□□□ 1.45
CCND3-222ENST00000612455 LRRC59Q96AG4 307 aaKnown RBP24.1■■□□□ 1.45
CCND3-222ENST00000612455 ESCO1Q5FWF5 840 aa24.09■■□□□ 1.45
CCND3-222ENST00000612455 SOS2Q07890 1332 aaPredicted RBP24.09■■□□□ 1.45
CCND3-222ENST00000612455 SHPRHQ149N8 1683 aa24.08■■□□□ 1.44
CCND3-222ENST00000612455 ADGRB2O60241 1585 aa24.07■■□□□ 1.44
CCND3-222ENST00000612455 SPATA31A6Q5VVP1 1343 aa24.07■■□□□ 1.44
CCND3-222ENST00000612455 ARHGEF28Q8N1W1 1705 aaKnown RBP24.07■■□□□ 1.44
CCND3-222ENST00000612455 NUTM2FA1L443 756 aa24.06■■□□□ 1.44
CCND3-222ENST00000612455 ILDR2Q71H61 639 aa24.06■■□□□ 1.44
CCND3-222ENST00000612455 RGPD8O14715 1765 aaPredicted RBP24.03■■□□□ 1.44
CCND3-222ENST00000612455 NPHP3Q7Z494 1330 aa24.03■■□□□ 1.44
CCND3-222ENST00000612455 MINK1Q8N4C8 1332 aaPredicted RBP24.02■■□□□ 1.44
CCND3-222ENST00000612455 WASLO00401 505 aaPredicted RBP24.01■■□□□ 1.43
CCND3-222ENST00000612455 FOXO3O43524 673 aa24.01■■□□□ 1.43
CCND3-222ENST00000612455 HIRIP3Q9BW71 556 aaPredicted RBP24.01■■□□□ 1.43
CCND3-222ENST00000612455 RGS17Q9UGC6 210 aaPredicted RBP24.01■■□□□ 1.43
CCND3-222ENST00000612455 TRPM1Q7Z4N2 1603 aa24■■□□□ 1.43
CCND3-222ENST00000612455 NBPF8Q3BBV2 869 aa24■■□□□ 1.43
CCND3-222ENST00000612455 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
CCND3-222ENST00000612455 PNPLA6Q8IY17 1366 aa24■■□□□ 1.43
CCND3-222ENST00000612455 ANKARQ7Z5J8 1434 aa24■■□□□ 1.43
CCND3-222ENST00000612455 PCGF6Q9BYE7 350 aa23.99■■□□□ 1.43
CCND3-222ENST00000612455 PXDNQ92626 1479 aa23.99■■□□□ 1.43
CCND3-222ENST00000612455 USP32Q8NFA0 1604 aa23.99■■□□□ 1.43
CCND3-222ENST00000612455 PHF8Q9UPP1 1060 aa23.98■■□□□ 1.43
CCND3-222ENST00000612455 LRP6O75581 1613 aa23.98■■□□□ 1.43
CCND3-222ENST00000612455 KIF1AQ12756 1690 aa23.98■■□□□ 1.43
CCND3-222ENST00000612455 EIF3AQ14152 1382 aaKnown RBP23.95■■□□□ 1.42
CCND3-222ENST00000612455 TONSLQ96HA7 1378 aa23.95■■□□□ 1.42
CCND3-222ENST00000612455 PRR36Q9H6K5 1346 aa23.95■■□□□ 1.42
CCND3-222ENST00000612455 TULP4Q9NRJ4 1543 aa23.94■■□□□ 1.42
CCND3-222ENST00000612455 GPRASP1Q5JY77 1395 aa23.93■■□□□ 1.42
CCND3-222ENST00000612455 CENPJQ9HC77 1338 aaPredicted RBP23.92■■□□□ 1.42
CCND3-222ENST00000612455 XPCQ01831 940 aaPredicted RBP23.92■■□□□ 1.42
CCND3-222ENST00000612455 KRT28Q7Z3Y7 464 aa23.92■■□□□ 1.42
CCND3-222ENST00000612455 NUTM2BA6NNL0 878 aaPredicted RBP23.91■■□□□ 1.42
CCND3-222ENST00000612455 NUTM2EB1AL46 878 aaPredicted RBP23.91■■□□□ 1.42
CCND3-222ENST00000612455 NUTM2AQ8IVF1 878 aaPredicted RBP23.91■■□□□ 1.42
CCND3-222ENST00000612455 CDK19Q9BWU1 502 aa23.91■■□□□ 1.42
CCND3-222ENST00000612455 ROCK2O75116 1388 aaKnown RBP23.91■■□□□ 1.42
CCND3-222ENST00000612455 COL22A1Q8NFW1 1626 aaPredicted RBP23.9■■□□□ 1.42
CCND3-222ENST00000612455 SPATA31A3Q5VYP0 1347 aa23.89■■□□□ 1.42
CCND3-222ENST00000612455 CLSPNQ9HAW4 1339 aa23.89■■□□□ 1.42
CCND3-222ENST00000612455 PMFBP1Q8TBY8 1022 aa23.89■■□□□ 1.41
CCND3-222ENST00000612455 NUDT16Q96DE0 195 aaKnown RBP23.89■■□□□ 1.41
CCND3-222ENST00000612455 PSME1Q06323 249 aa23.88■■□□□ 1.41
CCND3-222ENST00000612455 POTEAQ6S8J7 498 aa23.87■■□□□ 1.41
CCND3-222ENST00000612455 ATP7BP35670 1465 aa23.87■■□□□ 1.41
CCND3-222ENST00000612455 MEX3CQ5U5Q3 659 aaKnown RBP23.86■■□□□ 1.41
CCND3-222ENST00000612455 SBNO1A3KN83 1393 aa23.86■■□□□ 1.41
CCND3-222ENST00000612455 CCDC61Q9Y6R9 512 aa23.84■■□□□ 1.41
CCND3-222ENST00000612455 QRICH2Q9H0J4 1663 aa23.83■■□□□ 1.41
CCND3-222ENST00000612455 RALGAPBQ86X10 1494 aa23.83■■□□□ 1.41
CCND3-222ENST00000612455 TIMELESSQ9UNS1 1208 aa23.83■■□□□ 1.41
CCND3-222ENST00000612455 ITSN1Q15811 1721 aa23.82■■□□□ 1.4
CCND3-222ENST00000612455 PLEKHG3A1L390 1219 aa23.82■■□□□ 1.4
CCND3-222ENST00000612455 ZNF772Q68DY9 489 aaPredicted RBP23.81■■□□□ 1.4
CCND3-222ENST00000612455 CARD11Q9BXL7 1154 aa23.81■■□□□ 1.4
CCND3-222ENST00000612455 SOCS7O14512 581 aa23.8■■□□□ 1.4
CCND3-222ENST00000612455 TNS3Q68CZ2 1445 aa23.8■■□□□ 1.4
CCND3-222ENST00000612455 TRPM3Q9HCF6 1732 aaPredicted RBP23.79■■□□□ 1.4
CCND3-222ENST00000612455 NGDNQ8NEJ9 315 aaKnown RBP23.79■■□□□ 1.4
CCND3-222ENST00000612455 TOPAZ1Q8N9V7 1692 aa23.79■■□□□ 1.4
CCND3-222ENST00000612455 ADAMTS2O95450 1211 aa23.78■■□□□ 1.4
CCND3-222ENST00000612455 AFF2P51816 1311 aa23.78■■□□□ 1.4
CCND3-222ENST00000612455 POLR3AO14802 1390 aaPredicted RBP23.78■■□□□ 1.4
CCND3-222ENST00000612455 SRPK2P78362 688 aaKnown RBP23.77■■□□□ 1.4
CCND3-222ENST00000612455 CABP2Q9NPB3 220 aa23.77■■□□□ 1.4
CCND3-222ENST00000612455 C8orf37Q96NL8 207 aa23.76■■□□□ 1.39
CCND3-222ENST00000612455 EVC2Q86UK5 1308 aa23.76■■□□□ 1.39
CCND3-222ENST00000612455 ARHGEF10O15013 1369 aa23.76■■□□□ 1.39
CCND3-222ENST00000612455 SBNO2Q9Y2G9 1366 aa23.76■■□□□ 1.39
CCND3-222ENST00000612455 ACEP12821 1306 aa23.75■■□□□ 1.39
CCND3-222ENST00000612455 ALS2Q96Q42 1657 aa23.74■■□□□ 1.39
CCND3-222ENST00000612455 FNBP4Q8N3X1 1017 aaPredicted RBP23.74■■□□□ 1.39
CCND3-222ENST00000612455 NGLY1Q96IV0 654 aa23.74■■□□□ 1.39
CCND3-222ENST00000612455 MARF1Q9Y4F3 1742 aaKnown RBP23.73■■□□□ 1.39
CCND3-222ENST00000612455 PPIP5K1Q6PFW1 1433 aa23.7■■□□□ 1.38
CCND3-222ENST00000612455 LMOD2Q6P5Q4 547 aa23.7■■□□□ 1.38
CCND3-222ENST00000612455 CABLES1Q8TDN4 633 aa23.7■■□□□ 1.38
CCND3-222ENST00000612455 CABP1Q9NZU7 370 aa23.69■■□□□ 1.38
CCND3-222ENST00000612455 CCER1Q8TC90 406 aaPredicted RBP23.68■■□□□ 1.38
CCND3-222ENST00000612455 QTRT2Q9H974 415 aaKnown RBP23.68■■□□□ 1.38
CCND3-222ENST00000612455 PAK3O75914 559 aaPredicted RBP23.66■■□□□ 1.38
CCND3-222ENST00000612455 RXRBP28702 533 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms