RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 TRIM27P14373 513 aa17.77■□□□□ 0.43
HOXA3-207ENST00000612286 TMEM57Q8N5G2 664 aa17.77■□□□□ 0.43
HOXA3-207ENST00000612286 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
HOXA3-207ENST00000612286 MVPQ14764 893 aaKnown RBP17.76■□□□□ 0.43
HOXA3-207ENST00000612286 MPNDQ8N594 471 aa17.76■□□□□ 0.43
HOXA3-207ENST00000612286 CHMP5Q9NZZ3 219 aa17.76■□□□□ 0.43
HOXA3-207ENST00000612286 TRPM1Q7Z4N2 1603 aa17.76■□□□□ 0.43
HOXA3-207ENST00000612286 ABCC10Q5T3U5 1492 aa17.75■□□□□ 0.43
HOXA3-207ENST00000612286 CHAMP1Q96JM3 812 aa17.74■□□□□ 0.43
HOXA3-207ENST00000612286 HSP90AA2PQ14568 343 aaPredicted RBP17.74■□□□□ 0.43
HOXA3-207ENST00000612286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.74■□□□□ 0.43
HOXA3-207ENST00000612286 CDC42BPAQ5VT25 1732 aa17.74■□□□□ 0.43
HOXA3-207ENST00000612286 RSPH4AQ5TD94 716 aa17.74■□□□□ 0.43
HOXA3-207ENST00000612286 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
HOXA3-207ENST00000612286 HMOX1P09601 288 aa17.73■□□□□ 0.43
HOXA3-207ENST00000612286 NOL8Q76FK4 1167 aaKnown RBP17.73■□□□□ 0.43
HOXA3-207ENST00000612286 ASXL1Q8IXJ9 1541 aa17.73■□□□□ 0.43
HOXA3-207ENST00000612286 GRPEL1Q9HAV7 217 aa17.73■□□□□ 0.43
HOXA3-207ENST00000612286 GAS2L3Q86XJ1 694 aa17.72■□□□□ 0.43
HOXA3-207ENST00000612286 CD2BP2O95400 341 aaKnown RBP17.71■□□□□ 0.43
HOXA3-207ENST00000612286 RIPK4P57078 832 aa17.71■□□□□ 0.43
HOXA3-207ENST00000612286 RBM10P98175 930 aaKnown RBP17.71■□□□□ 0.43
HOXA3-207ENST00000612286 TNPO1Q92973 898 aaKnown RBP17.71■□□□□ 0.43
HOXA3-207ENST00000612286 ADCY10Q96PN6 1610 aa17.7■□□□□ 0.42
HOXA3-207ENST00000612286 ERBB4Q15303 1308 aa17.7■□□□□ 0.42
HOXA3-207ENST00000612286 SOX12O15370 315 aa17.7■□□□□ 0.42
HOXA3-207ENST00000612286 MINK1Q8N4C8 1332 aaPredicted RBP17.7■□□□□ 0.42
HOXA3-207ENST00000612286 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
HOXA3-207ENST00000612286 TRAPPC8Q9Y2L5 1435 aa17.69■□□□□ 0.42
HOXA3-207ENST00000612286 CROCC2H7BZ55 1655 aa17.69■□□□□ 0.42
HOXA3-207ENST00000612286 SSFA2P28290 1259 aa17.68■□□□□ 0.42
HOXA3-207ENST00000612286 INSRP06213 1382 aa17.68■□□□□ 0.42
HOXA3-207ENST00000612286 SAMD9LQ8IVG5 1584 aa17.68■□□□□ 0.42
HOXA3-207ENST00000612286 UGGT1Q9NYU2 1555 aa17.68■□□□□ 0.42
HOXA3-207ENST00000612286 SCAF11Q99590 1463 aaKnown RBP17.68■□□□□ 0.42
HOXA3-207ENST00000612286 PRDM15P57071 1507 aaPredicted RBP17.67■□□□□ 0.42
HOXA3-207ENST00000612286 ESPNB1AK53 854 aa17.66■□□□□ 0.42
HOXA3-207ENST00000612286 ATAD2Q6PL18 1390 aa17.66■□□□□ 0.42
HOXA3-207ENST00000612286 DDX49Q9Y6V7 483 aaKnown RBP17.66■□□□□ 0.42
HOXA3-207ENST00000612286 CFAP65Q6ZU64 1925 aaKnown RBP17.66■□□□□ 0.42
HOXA3-207ENST00000612286 ATF7IPQ6VMQ6 1270 aa17.65■□□□□ 0.42
HOXA3-207ENST00000612286 SLC24A1O60721 1099 aa17.65■□□□□ 0.42
HOXA3-207ENST00000612286 SHANK2Q9UPX8 1470 aa17.65■□□□□ 0.42
HOXA3-207ENST00000612286 PIK3C2GO75747 1445 aa17.64■□□□□ 0.41
HOXA3-207ENST00000612286 SCAPERQ9BY12 1400 aa17.64■□□□□ 0.41
HOXA3-207ENST00000612286 DTNBO60941 627 aa17.63■□□□□ 0.41
HOXA3-207ENST00000612286 MRE11P49959 708 aa17.63■□□□□ 0.41
HOXA3-207ENST00000612286 MCTP1Q6DN14 999 aa17.63■□□□□ 0.41
HOXA3-207ENST00000612286 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
HOXA3-207ENST00000612286 DDX19BQ9UMR2 479 aa17.62■□□□□ 0.41
HOXA3-207ENST00000612286 ZMYND15Q9H091 742 aa17.62■□□□□ 0.41
HOXA3-207ENST00000612286 DCTN1Q14203 1278 aa17.61■□□□□ 0.41
HOXA3-207ENST00000612286 CAVIN1Q6NZI2 390 aaKnown RBP17.61■□□□□ 0.41
HOXA3-207ENST00000612286 RNF214Q8ND24 703 aa17.61■□□□□ 0.41
HOXA3-207ENST00000612286 PKNOX2Q96KN3 472 aa17.61■□□□□ 0.41
HOXA3-207ENST00000612286 C16orf71Q8IYS4 520 aaPredicted RBP17.6■□□□□ 0.41
HOXA3-207ENST00000612286 GLIPR1L2Q4G1C9 344 aa17.6■□□□□ 0.41
HOXA3-207ENST00000612286 GAS2L2Q8NHY3 880 aa17.6■□□□□ 0.41
HOXA3-207ENST00000612286 KANK1Q14678 1352 aa17.6■□□□□ 0.41
HOXA3-207ENST00000612286 DDX11L8A8MPP1 907 aa17.59■□□□□ 0.41
HOXA3-207ENST00000612286 WDR63Q8IWG1 891 aa17.59■□□□□ 0.41
HOXA3-207ENST00000612286 TSPYL6Q8N831 410 aa17.59■□□□□ 0.41
HOXA3-207ENST00000612286 NUTM2FA1L443 756 aa17.59■□□□□ 0.41
HOXA3-207ENST00000612286 PKP1Q13835 747 aa17.59■□□□□ 0.41
HOXA3-207ENST00000612286 CHD1LQ86WJ1 897 aa17.59■□□□□ 0.41
HOXA3-207ENST00000612286 ANP32BQ92688 251 aaKnown RBP17.59■□□□□ 0.41
HOXA3-207ENST00000612286 GBP4Q96PP9 640 aa17.59■□□□□ 0.41
HOXA3-207ENST00000612286 FAM13BQ9NYF5 915 aa17.59■□□□□ 0.41
HOXA3-207ENST00000612286 RBM27Q9P2N5 1060 aaKnown RBP17.59■□□□□ 0.41
HOXA3-207ENST00000612286 NLRP1Q9C000 1473 aa17.58■□□□□ 0.41
HOXA3-207ENST00000612286 NOS1P29475 1434 aa17.58■□□□□ 0.4
HOXA3-207ENST00000612286 FSD2A1L4K1 749 aa17.57■□□□□ 0.4
HOXA3-207ENST00000612286 SMARCA5O60264 1052 aaPredicted RBP17.57■□□□□ 0.4
HOXA3-207ENST00000612286 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
HOXA3-207ENST00000612286 ABCA8O94911 1581 aa17.57■□□□□ 0.4
HOXA3-207ENST00000612286 TTC37Q6PGP7 1564 aa17.57■□□□□ 0.4
HOXA3-207ENST00000612286 CLCN1P35523 988 aa17.56■□□□□ 0.4
HOXA3-207ENST00000612286 NASPP49321 788 aaPredicted RBP17.56■□□□□ 0.4
HOXA3-207ENST00000612286 TBC1D9Q6ZT07 1266 aa17.56■□□□□ 0.4
HOXA3-207ENST00000612286 TSHZ3Q63HK5 1081 aa17.56■□□□□ 0.4
HOXA3-207ENST00000612286 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
HOXA3-207ENST00000612286 ERVK-7P63135 1459 aa17.56■□□□□ 0.4
HOXA3-207ENST00000612286 FAM83GA6ND36 823 aa17.56■□□□□ 0.4
HOXA3-207ENST00000612286 PLEKHG5O94827 1062 aa17.56■□□□□ 0.4
HOXA3-207ENST00000612286 KIAA1211Q6ZU35 1233 aa17.56■□□□□ 0.4
HOXA3-207ENST00000612286 OTUD7AQ8TE49 926 aaPredicted RBP17.55■□□□□ 0.4
HOXA3-207ENST00000612286 R3HCC1Q9Y3T6 440 aaKnown RBP17.55■□□□□ 0.4
HOXA3-207ENST00000612286 KRT24Q2M2I5 525 aa17.55■□□□□ 0.4
HOXA3-207ENST00000612286 MYO5CQ9NQX4 1742 aa17.54■□□□□ 0.4
HOXA3-207ENST00000612286 GOLGA6L22H0YM25 854 aa17.53■□□□□ 0.4
HOXA3-207ENST00000612286 MSNP26038 577 aaKnown RBP17.53■□□□□ 0.4
HOXA3-207ENST00000612286 PLCB2Q00722 1185 aa17.53■□□□□ 0.4
HOXA3-207ENST00000612286 XPCQ01831 940 aaPredicted RBP17.53■□□□□ 0.4
HOXA3-207ENST00000612286 PRPF40AO75400 957 aaKnown RBP17.53■□□□□ 0.4
HOXA3-207ENST00000612286 POLR3AO14802 1390 aaPredicted RBP17.52■□□□□ 0.4
HOXA3-207ENST00000612286 CDC42BPBQ9Y5S2 1711 aa17.52■□□□□ 0.4
HOXA3-207ENST00000612286 IPO8O15397 1037 aaKnown RBP17.52■□□□□ 0.39
HOXA3-207ENST00000612286 PHACTR3Q96KR7 559 aa17.52■□□□□ 0.39
HOXA3-207ENST00000612286 BCL11BQ9C0K0 894 aaPredicted RBP17.52■□□□□ 0.39
HOXA3-207ENST00000612286 ZBTB40Q9NUA8 1239 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms