RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 CDC42BPGQ6DT37 1551 aa26.1■■□□□ 1.77
MUC1-224ENST00000611577 COL22A1Q8NFW1 1626 aaPredicted RBP26.1■■□□□ 1.77
MUC1-224ENST00000611577 TRIM26Q12899 539 aaPredicted RBP26.09■■□□□ 1.77
MUC1-224ENST00000611577 TRPC5Q9UL62 973 aaPredicted RBP26.09■■□□□ 1.77
MUC1-224ENST00000611577 ATAD2Q6PL18 1390 aa26.08■■□□□ 1.77
MUC1-224ENST00000611577 ESCO1Q5FWF5 840 aa26.07■■□□□ 1.76
MUC1-224ENST00000611577 NPHP3Q7Z494 1330 aa26.07■■□□□ 1.76
MUC1-224ENST00000611577 FNBP4Q8N3X1 1017 aaPredicted RBP26.06■■□□□ 1.76
MUC1-224ENST00000611577 MYOM2P54296 1465 aa26.05■■□□□ 1.76
MUC1-224ENST00000611577 ATRNO75882 1429 aa26.05■■□□□ 1.76
MUC1-224ENST00000611577 FOXD1Q16676 465 aa26.04■■□□□ 1.76
MUC1-224ENST00000611577 PXDNQ92626 1479 aa26.04■■□□□ 1.76
MUC1-224ENST00000611577 ADGRF5Q8IZF2 1346 aa26.02■■□□□ 1.76
MUC1-224ENST00000611577 CCDC144AA2RUR9 1427 aa26.01■■□□□ 1.75
MUC1-224ENST00000611577 XPCQ01831 940 aaPredicted RBP26.01■■□□□ 1.75
MUC1-224ENST00000611577 STK26Q9P289 416 aa26.01■■□□□ 1.75
MUC1-224ENST00000611577 FOXO3O43524 673 aa25.99■■□□□ 1.75
MUC1-224ENST00000611577 MPHOSPH9Q99550 1183 aa25.99■■□□□ 1.75
MUC1-224ENST00000611577 TECPR2O15040 1411 aa25.98■■□□□ 1.75
MUC1-224ENST00000611577 NUTM2FA1L443 756 aa25.98■■□□□ 1.75
MUC1-224ENST00000611577 RGL3Q3MIN7 710 aa25.98■■□□□ 1.75
MUC1-224ENST00000611577 SRCAPQ6ZRS2 3230 aa25.98■■□□□ 1.75
MUC1-224ENST00000611577 LRPPRCP42704 1394 aaKnown RBP25.97■■□□□ 1.75
MUC1-224ENST00000611577 WAPLQ7Z5K2 1190 aa25.97■■□□□ 1.75
MUC1-224ENST00000611577 BCL9LQ86UU0 1499 aa25.97■■□□□ 1.75
MUC1-224ENST00000611577 SPATA31E1Q6ZUB1 1445 aa25.96■■□□□ 1.75
MUC1-224ENST00000611577 ANKRD30BQ9BXX2 1392 aa25.95■■□□□ 1.75
MUC1-224ENST00000611577 MARF1Q9Y4F3 1742 aaKnown RBP25.95■■□□□ 1.74
MUC1-224ENST00000611577 HRCP23327 699 aa25.95■■□□□ 1.74
MUC1-224ENST00000611577 IFT172Q9UG01 1749 aa25.94■■□□□ 1.74
MUC1-224ENST00000611577 PLEKHH1Q9ULM0 1364 aa25.94■■□□□ 1.74
MUC1-224ENST00000611577 EP400Q96L91 3159 aa25.93■■□□□ 1.74
MUC1-224ENST00000611577 KNDC1Q76NI1 1749 aa25.93■■□□□ 1.74
MUC1-224ENST00000611577 ABCC11Q96J66 1382 aa25.93■■□□□ 1.74
MUC1-224ENST00000611577 TMEM132EQ6IEE7 984 aa25.92■■□□□ 1.74
MUC1-224ENST00000611577 PIK3C2GO75747 1445 aa25.91■■□□□ 1.74
MUC1-224ENST00000611577 FMN2Q9NZ56 1722 aa25.9■■□□□ 1.74
MUC1-224ENST00000611577 GJD4Q96KN9 370 aaPredicted RBP25.89■■□□□ 1.74
MUC1-224ENST00000611577 YTHDC2Q9H6S0 1430 aaKnown RBP25.88■■□□□ 1.73
MUC1-224ENST00000611577 KIF1AQ12756 1690 aa25.88■■□□□ 1.73
MUC1-224ENST00000611577 SPATA31A3Q5VYP0 1347 aa25.87■■□□□ 1.73
MUC1-224ENST00000611577 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.86■■□□□ 1.73
MUC1-224ENST00000611577 ZRANB1Q9UGI0 708 aa25.86■■□□□ 1.73
MUC1-224ENST00000611577 SLIT2O94813 1529 aa25.84■■□□□ 1.73
MUC1-224ENST00000611577 CCDC125Q86Z20 511 aa25.84■■□□□ 1.73
MUC1-224ENST00000611577 UNC5CLQ8IV45 518 aa25.84■■□□□ 1.73
MUC1-224ENST00000611577 RALGAPBQ86X10 1494 aa25.84■■□□□ 1.73
MUC1-224ENST00000611577 USP32Q8NFA0 1604 aa25.83■■□□□ 1.73
MUC1-224ENST00000611577 GLI3P10071 1580 aa25.82■■□□□ 1.72
MUC1-224ENST00000611577 KRT28Q7Z3Y7 464 aa25.82■■□□□ 1.72
MUC1-224ENST00000611577 TNS3Q68CZ2 1445 aa25.8■■□□□ 1.72
MUC1-224ENST00000611577 HAP1P54257 671 aaPredicted RBP25.79■■□□□ 1.72
MUC1-224ENST00000611577 SIRT1Q96EB6 747 aa25.78■■□□□ 1.72
MUC1-224ENST00000611577 PHF8Q9UPP1 1060 aa25.78■■□□□ 1.72
MUC1-224ENST00000611577 C14orf93Q9H972 538 aaKnown RBP25.77■■□□□ 1.72
MUC1-224ENST00000611577 PLEKHG5O94827 1062 aa25.76■■□□□ 1.71
MUC1-224ENST00000611577 PSME1Q06323 249 aa25.76■■□□□ 1.71
MUC1-224ENST00000611577 PCGF6Q9BYE7 350 aa25.76■■□□□ 1.71
MUC1-224ENST00000611577 NRXN1Q9ULB1 1477 aa25.75■■□□□ 1.71
MUC1-224ENST00000611577 BLMP54132 1417 aaPredicted RBP25.75■■□□□ 1.71
MUC1-224ENST00000611577 DHX57Q6P158 1386 aaKnown RBP25.75■■□□□ 1.71
MUC1-224ENST00000611577 RGPD8O14715 1765 aaPredicted RBP25.74■■□□□ 1.71
MUC1-224ENST00000611577 SAFB2Q14151 953 aaKnown RBP eCLIP25.74■■□□□ 1.71
MUC1-224ENST00000611577 CFAP70Q5T0N1 1121 aa25.74■■□□□ 1.71
MUC1-224ENST00000611577 CABLES1Q8TDN4 633 aa25.74■■□□□ 1.71
MUC1-224ENST00000611577 LMOD2Q6P5Q4 547 aa25.72■■□□□ 1.71
MUC1-224ENST00000611577 PRAM1Q96QH2 718 aa25.72■■□□□ 1.71
MUC1-224ENST00000611577 SBNO1A3KN83 1393 aa25.71■■□□□ 1.71
MUC1-224ENST00000611577 PLCH1Q4KWH8 1693 aa25.71■■□□□ 1.71
MUC1-224ENST00000611577 VPS72Q15906 364 aa25.71■■□□□ 1.71
MUC1-224ENST00000611577 ARHGEF10O15013 1369 aa25.7■■□□□ 1.71
MUC1-224ENST00000611577 BRWD3Q6RI45 1802 aa25.7■■□□□ 1.71
MUC1-224ENST00000611577 SEPT12Q8IYM1 358 aa25.7■■□□□ 1.7
MUC1-224ENST00000611577 CCDC9Q9Y3X0 531 aaKnown RBP25.7■■□□□ 1.7
MUC1-224ENST00000611577 ABCA3Q99758 1704 aa25.7■■□□□ 1.7
MUC1-224ENST00000611577 NWD2Q9ULI1 1742 aa25.68■■□□□ 1.7
MUC1-224ENST00000611577 DEFB132Q7Z7B7 95 aa25.67■■□□□ 1.7
MUC1-224ENST00000611577 POGKQ9P215 609 aa25.67■■□□□ 1.7
MUC1-224ENST00000611577 DLC1Q96QB1 1528 aa25.67■■□□□ 1.7
MUC1-224ENST00000611577 ANKARQ7Z5J8 1434 aa25.66■■□□□ 1.7
MUC1-224ENST00000611577 SF3B2Q13435 895 aaKnown RBP25.66■■□□□ 1.7
MUC1-224ENST00000611577 PMFBP1Q8TBY8 1022 aa25.66■■□□□ 1.7
MUC1-224ENST00000611577 ADGRB2O60241 1585 aa25.64■■□□□ 1.69
MUC1-224ENST00000611577 KRT27Q7Z3Y8 459 aa25.62■■□□□ 1.69
MUC1-224ENST00000611577 A0A0G2JS52 829 aa25.61■■□□□ 1.69
MUC1-224ENST00000611577 FAM83GA6ND36 823 aa25.61■■□□□ 1.69
MUC1-224ENST00000611577 ONECUT3O60422 494 aaPredicted RBP25.61■■□□□ 1.69
MUC1-224ENST00000611577 MYT1Q01538 1121 aa25.61■■□□□ 1.69
MUC1-224ENST00000611577 ADGRB1O14514 1584 aa25.6■■□□□ 1.69
MUC1-224ENST00000611577 HIRIP3Q9BW71 556 aaPredicted RBP25.59■■□□□ 1.69
MUC1-224ENST00000611577 TRPM3Q9HCF6 1732 aaPredicted RBP25.58■■□□□ 1.69
MUC1-224ENST00000611577 TRAK1Q9UPV9 953 aa25.58■■□□□ 1.69
MUC1-224ENST00000611577 NRAPQ86VF7 1730 aa25.57■■□□□ 1.68
MUC1-224ENST00000611577 MINK1Q8N4C8 1332 aaPredicted RBP25.57■■□□□ 1.68
MUC1-224ENST00000611577 EIF3AQ14152 1382 aaKnown RBP25.56■■□□□ 1.68
MUC1-224ENST00000611577 GPRASP1Q5JY77 1395 aa25.56■■□□□ 1.68
MUC1-224ENST00000611577 FAM98CQ17RN3 349 aaKnown RBP25.55■■□□□ 1.68
MUC1-224ENST00000611577 BTG4Q9NY30 223 aa25.55■■□□□ 1.68
MUC1-224ENST00000611577 ALS2Q96Q42 1657 aa25.55■■□□□ 1.68
MUC1-224ENST00000611577 TULP4Q9NRJ4 1543 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms