RNA–Protein interactions for RNA: ENST00000611255.4

LRMDA-215, Transcript of leucine rich melanocyte differentiation associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRMDA, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-215ENST00000611255 ADGRF5Q8IZF2 1346 aa33.88■■■■□ 3.01
LRMDA-215ENST00000611255 COL22A1Q8NFW1 1626 aaPredicted RBP33.88■■■■□ 3.01
LRMDA-215ENST00000611255 ESCO1Q5FWF5 840 aa33.87■■■■□ 3.01
LRMDA-215ENST00000611255 CDC42BPGQ6DT37 1551 aa33.86■■■■□ 3.01
LRMDA-215ENST00000611255 TRPC5Q9UL62 973 aaPredicted RBP33.85■■■■□ 3.01
LRMDA-215ENST00000611255 NPHP3Q7Z494 1330 aa33.84■■■■□ 3.01
LRMDA-215ENST00000611255 PXDNQ92626 1479 aa33.82■■■■□ 3.01
LRMDA-215ENST00000611255 MYOM2P54296 1465 aa33.82■■■■□ 3
LRMDA-215ENST00000611255 RGL3Q3MIN7 710 aa33.81■■■■□ 3
LRMDA-215ENST00000611255 WAPLQ7Z5K2 1190 aa33.81■■■■□ 3
LRMDA-215ENST00000611255 ATRNO75882 1429 aa33.8■■■■□ 3
LRMDA-215ENST00000611255 SPATA31E1Q6ZUB1 1445 aa33.8■■■■□ 3
LRMDA-215ENST00000611255 FOXO3O43524 673 aa33.8■■■■□ 3
LRMDA-215ENST00000611255 STK26Q9P289 416 aa33.8■■■■□ 3
LRMDA-215ENST00000611255 CCDC144AA2RUR9 1427 aa33.79■■■■□ 3
LRMDA-215ENST00000611255 TECPR2O15040 1411 aa33.79■■■■□ 3
LRMDA-215ENST00000611255 LRPPRCP42704 1394 aaKnown RBP33.78■■■■□ 3
LRMDA-215ENST00000611255 ATAD2Q6PL18 1390 aa33.77■■■■□ 3
LRMDA-215ENST00000611255 XPCQ01831 940 aaPredicted RBP33.77■■■■□ 3
LRMDA-215ENST00000611255 ABCC11Q96J66 1382 aa33.75■■■□□ 2.99
LRMDA-215ENST00000611255 ANKRD30BQ9BXX2 1392 aa33.75■■■□□ 2.99
LRMDA-215ENST00000611255 NUTM2FA1L443 756 aa33.75■■■□□ 2.99
LRMDA-215ENST00000611255 TMEM132EQ6IEE7 984 aa33.75■■■□□ 2.99
LRMDA-215ENST00000611255 IFT172Q9UG01 1749 aa33.75■■■□□ 2.99
LRMDA-215ENST00000611255 PLEKHH1Q9ULM0 1364 aa33.74■■■□□ 2.99
LRMDA-215ENST00000611255 MPHOSPH9Q99550 1183 aa33.74■■■□□ 2.99
LRMDA-215ENST00000611255 BCL9LQ86UU0 1499 aa33.74■■■□□ 2.99
LRMDA-215ENST00000611255 MARF1Q9Y4F3 1742 aaKnown RBP33.7■■■□□ 2.99
LRMDA-215ENST00000611255 KNDC1Q76NI1 1749 aa33.7■■■□□ 2.98
LRMDA-215ENST00000611255 PIK3C2GO75747 1445 aa33.7■■■□□ 2.98
LRMDA-215ENST00000611255 SRCAPQ6ZRS2 3230 aa33.66■■■□□ 2.98
LRMDA-215ENST00000611255 FMN2Q9NZ56 1722 aa33.65■■■□□ 2.98
LRMDA-215ENST00000611255 YTHDC2Q9H6S0 1430 aaKnown RBP33.65■■■□□ 2.98
LRMDA-215ENST00000611255 EP400Q96L91 3159 aa33.65■■■□□ 2.98
LRMDA-215ENST00000611255 GJD4Q96KN9 370 aaPredicted RBP33.64■■■□□ 2.98
LRMDA-215ENST00000611255 SPATA31A3Q5VYP0 1347 aa33.63■■■□□ 2.97
LRMDA-215ENST00000611255 SIRT1Q96EB6 747 aa33.62■■■□□ 2.97
LRMDA-215ENST00000611255 C14orf93Q9H972 538 aaKnown RBP33.59■■■□□ 2.97
LRMDA-215ENST00000611255 KRT28Q7Z3Y7 464 aa33.58■■■□□ 2.97
LRMDA-215ENST00000611255 UNC5CLQ8IV45 518 aa33.58■■■□□ 2.97
LRMDA-215ENST00000611255 KIF1AQ12756 1690 aa33.58■■■□□ 2.97
LRMDA-215ENST00000611255 SLIT2O94813 1529 aa33.57■■■□□ 2.96
LRMDA-215ENST00000611255 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.56■■■□□ 2.96
LRMDA-215ENST00000611255 CCDC125Q86Z20 511 aa33.55■■■□□ 2.96
LRMDA-215ENST00000611255 NRXN1Q9ULB1 1477 aa33.53■■■□□ 2.96
LRMDA-215ENST00000611255 CFAP70Q5T0N1 1121 aa33.53■■■□□ 2.96
LRMDA-215ENST00000611255 RGPD8O14715 1765 aaPredicted RBP33.52■■■□□ 2.96
LRMDA-215ENST00000611255 PHF8Q9UPP1 1060 aa33.52■■■□□ 2.96
LRMDA-215ENST00000611255 GLI3P10071 1580 aa33.51■■■□□ 2.96
LRMDA-215ENST00000611255 RALGAPBQ86X10 1494 aa33.51■■■□□ 2.96
LRMDA-215ENST00000611255 ZRANB1Q9UGI0 708 aa33.5■■■□□ 2.95
LRMDA-215ENST00000611255 USP32Q8NFA0 1604 aa33.5■■■□□ 2.95
LRMDA-215ENST00000611255 DHX57Q6P158 1386 aaKnown RBP33.49■■■□□ 2.95
LRMDA-215ENST00000611255 TNS3Q68CZ2 1445 aa33.47■■■□□ 2.95
LRMDA-215ENST00000611255 PSME1Q06323 249 aa33.47■■■□□ 2.95
LRMDA-215ENST00000611255 CABLES1Q8TDN4 633 aa33.46■■■□□ 2.95
LRMDA-215ENST00000611255 PRAM1Q96QH2 718 aa33.45■■■□□ 2.95
LRMDA-215ENST00000611255 SAFB2Q14151 953 aaKnown RBP eCLIP33.44■■■□□ 2.94
LRMDA-215ENST00000611255 ACIN1Q9UKV3 1341 aaKnown RBP33.44■■■□□ 2.94
LRMDA-215ENST00000611255 SBNO1A3KN83 1393 aa33.43■■■□□ 2.94
LRMDA-215ENST00000611255 HAP1P54257 671 aaPredicted RBP33.41■■■□□ 2.94
LRMDA-215ENST00000611255 VPS72Q15906 364 aa33.4■■■□□ 2.94
LRMDA-215ENST00000611255 BRWD3Q6RI45 1802 aa33.39■■■□□ 2.94
LRMDA-215ENST00000611255 PLEKHG5O94827 1062 aa33.38■■■□□ 2.93
LRMDA-215ENST00000611255 DLC1Q96QB1 1528 aa33.38■■■□□ 2.93
LRMDA-215ENST00000611255 BLMP54132 1417 aaPredicted RBP33.37■■■□□ 2.93
LRMDA-215ENST00000611255 LMOD2Q6P5Q4 547 aa33.37■■■□□ 2.93
LRMDA-215ENST00000611255 SEPT12Q8IYM1 358 aa33.37■■■□□ 2.93
LRMDA-215ENST00000611255 PMFBP1Q8TBY8 1022 aa33.36■■■□□ 2.93
LRMDA-215ENST00000611255 POGKQ9P215 609 aa33.36■■■□□ 2.93
LRMDA-215ENST00000611255 ARHGEF10O15013 1369 aa33.35■■■□□ 2.93
LRMDA-215ENST00000611255 ONECUT3O60422 494 aaPredicted RBP33.35■■■□□ 2.93
LRMDA-215ENST00000611255 ABCA3Q99758 1704 aa33.35■■■□□ 2.93
LRMDA-215ENST00000611255 PLCH1Q4KWH8 1693 aa33.35■■■□□ 2.93
LRMDA-215ENST00000611255 ANKARQ7Z5J8 1434 aa33.35■■■□□ 2.93
LRMDA-215ENST00000611255 NWD2Q9ULI1 1742 aa33.34■■■□□ 2.93
LRMDA-215ENST00000611255 FAM83GA6ND36 823 aa33.32■■■□□ 2.92
LRMDA-215ENST00000611255 ADGRB1O14514 1584 aa33.31■■■□□ 2.92
LRMDA-215ENST00000611255 ADGRB2O60241 1585 aa33.3■■■□□ 2.92
LRMDA-215ENST00000611255 DEFB132Q7Z7B7 95 aa33.3■■■□□ 2.92
LRMDA-215ENST00000611255 CCDC9Q9Y3X0 531 aaKnown RBP33.3■■■□□ 2.92
LRMDA-215ENST00000611255 TRAK1Q9UPV9 953 aa33.28■■■□□ 2.92
LRMDA-215ENST00000611255 RAB3GAP2Q9H2M9 1393 aa33.27■■■□□ 2.92
LRMDA-215ENST00000611255 HIRIP3Q9BW71 556 aaPredicted RBP33.27■■■□□ 2.92
LRMDA-215ENST00000611255 TRPM3Q9HCF6 1732 aaPredicted RBP33.26■■■□□ 2.92
LRMDA-215ENST00000611255 KRT27Q7Z3Y8 459 aa33.25■■■□□ 2.91
LRMDA-215ENST00000611255 PRR36Q9H6K5 1346 aa33.25■■■□□ 2.91
LRMDA-215ENST00000611255 MINK1Q8N4C8 1332 aaPredicted RBP33.23■■■□□ 2.91
LRMDA-215ENST00000611255 SF3B2Q13435 895 aaKnown RBP33.22■■■□□ 2.91
LRMDA-215ENST00000611255 ALS2Q96Q42 1657 aa33.2■■■□□ 2.91
LRMDA-215ENST00000611255 NRAPQ86VF7 1730 aa33.2■■■□□ 2.91
LRMDA-215ENST00000611255 KDM2AQ9Y2K7 1162 aa33.2■■■□□ 2.91
LRMDA-215ENST00000611255 GPRASP1Q5JY77 1395 aa33.2■■■□□ 2.9
LRMDA-215ENST00000611255 WASLO00401 505 aaPredicted RBP33.19■■■□□ 2.9
LRMDA-215ENST00000611255 BTG4Q9NY30 223 aa33.19■■■□□ 2.9
LRMDA-215ENST00000611255 TULP4Q9NRJ4 1543 aa33.18■■■□□ 2.9
LRMDA-215ENST00000611255 DCAF11Q8TEB1 546 aa33.17■■■□□ 2.9
LRMDA-215ENST00000611255 EIF3AQ14152 1382 aaKnown RBP33.17■■■□□ 2.9
LRMDA-215ENST00000611255 FAM98CQ17RN3 349 aaKnown RBP33.16■■■□□ 2.9
LRMDA-215ENST00000611255 COL14A1Q05707 1796 aaKnown RBP33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms