RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 MYOM1P52179 1685 aa23.25■■□□□ 1.31
TNIP1-221ENST00000610874 KDM5AP29375 1690 aaKnown RBP23.24■■□□□ 1.31
TNIP1-221ENST00000610874 PPP2R1AP30153 589 aa23.24■■□□□ 1.31
TNIP1-221ENST00000610874 SETBP1Q9Y6X0 1596 aa23.23■■□□□ 1.31
TNIP1-221ENST00000610874 ADAMTS8Q9UP79 889 aa23.23■■□□□ 1.31
TNIP1-221ENST00000610874 PLPPR3Q6T4P5 718 aa23.23■■□□□ 1.31
TNIP1-221ENST00000610874 TMEM131LA2VDJ0 1609 aa23.22■■□□□ 1.31
TNIP1-221ENST00000610874 CABP2Q9NPB3 220 aa23.2■■□□□ 1.3
TNIP1-221ENST00000610874 AGLP35573 1532 aa23.2■■□□□ 1.3
TNIP1-221ENST00000610874 TNNT2P45379 298 aaPredicted RBP23.19■■□□□ 1.3
TNIP1-221ENST00000610874 INSRP06213 1382 aa23.19■■□□□ 1.3
TNIP1-221ENST00000610874 SLC24A1O60721 1099 aa23.18■■□□□ 1.3
TNIP1-221ENST00000610874 ASXL1Q8IXJ9 1541 aa23.18■■□□□ 1.3
TNIP1-221ENST00000610874 QRICH2Q9H0J4 1663 aa23.18■■□□□ 1.3
TNIP1-221ENST00000610874 ARHGEF40Q8TER5 1519 aa23.18■■□□□ 1.3
TNIP1-221ENST00000610874 TRHP20396 242 aaPredicted RBP23.17■■□□□ 1.3
TNIP1-221ENST00000610874 PPP6R1Q9UPN7 881 aa23.17■■□□□ 1.3
TNIP1-221ENST00000610874 REREQ9P2R6 1566 aa23.17■■□□□ 1.3
TNIP1-221ENST00000610874 PPM1GO15355 546 aaPredicted RBP23.16■■□□□ 1.3
TNIP1-221ENST00000610874 WDR43Q15061 677 aaKnown RBP eCLIP23.16■■□□□ 1.3
TNIP1-221ENST00000610874 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
TNIP1-221ENST00000610874 MINK1Q8N4C8 1332 aaPredicted RBP23.16■■□□□ 1.3
TNIP1-221ENST00000610874 SBNO2Q9Y2G9 1366 aa23.16■■□□□ 1.3
TNIP1-221ENST00000610874 ZMYM3Q14202 1370 aa23.16■■□□□ 1.3
TNIP1-221ENST00000610874 MYO3AQ8NEV4 1616 aa23.16■■□□□ 1.3
TNIP1-221ENST00000610874 PRAM1Q96QH2 718 aa23.15■■□□□ 1.3
TNIP1-221ENST00000610874 DDRGK1Q96HY6 314 aa23.15■■□□□ 1.3
TNIP1-221ENST00000610874 PLEKHH1Q9ULM0 1364 aa23.14■■□□□ 1.3
TNIP1-221ENST00000610874 IL27Q8NEV9 243 aa23.14■■□□□ 1.29
TNIP1-221ENST00000610874 POGKQ9P215 609 aa23.13■■□□□ 1.29
TNIP1-221ENST00000610874 EVC2Q86UK5 1308 aa23.12■■□□□ 1.29
TNIP1-221ENST00000610874 SRPK2P78362 688 aaKnown RBP23.12■■□□□ 1.29
TNIP1-221ENST00000610874 ZFYVE9O95405 1425 aa23.12■■□□□ 1.29
TNIP1-221ENST00000610874 SLC4A3P48751 1232 aa23.12■■□□□ 1.29
TNIP1-221ENST00000610874 CEBPAP49715 358 aaPredicted RBP23.12■■□□□ 1.29
TNIP1-221ENST00000610874 DUSP27Q5VZP5 1158 aa23.12■■□□□ 1.29
TNIP1-221ENST00000610874 KDM2BQ8NHM5 1336 aa23.11■■□□□ 1.29
TNIP1-221ENST00000610874 NSD3Q9BZ95 1437 aa23.11■■□□□ 1.29
TNIP1-221ENST00000610874 A2ML1A8K2U0 1454 aa23.1■■□□□ 1.29
TNIP1-221ENST00000610874 ARHGEF28Q8N1W1 1705 aaKnown RBP23.1■■□□□ 1.29
TNIP1-221ENST00000610874 CENPQQ7L2Z9 268 aaPredicted RBP23.09■■□□□ 1.29
TNIP1-221ENST00000610874 WAPLQ7Z5K2 1190 aa23.08■■□□□ 1.29
TNIP1-221ENST00000610874 GOLGA2Q08379 1002 aa23.08■■□□□ 1.28
TNIP1-221ENST00000610874 RTN4Q9NQC3 1192 aaKnown RBP23.08■■□□□ 1.28
TNIP1-221ENST00000610874 TULP4Q9NRJ4 1543 aa23.07■■□□□ 1.28
TNIP1-221ENST00000610874 YTHDC2Q9H6S0 1430 aaKnown RBP23.07■■□□□ 1.28
TNIP1-221ENST00000610874 RIMS2Q9UQ26 1411 aa23.07■■□□□ 1.28
TNIP1-221ENST00000610874 CCDC146Q8IYE0 955 aa23.07■■□□□ 1.28
TNIP1-221ENST00000610874 SPATA31D1Q6ZQQ2 1576 aa23.07■■□□□ 1.28
TNIP1-221ENST00000610874 DAXXQ9UER7 740 aaPredicted RBP23.06■■□□□ 1.28
TNIP1-221ENST00000610874 MORC1Q86VD1 984 aa23.05■■□□□ 1.28
TNIP1-221ENST00000610874 ALKQ9UM73 1620 aa23.05■■□□□ 1.28
TNIP1-221ENST00000610874 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.04■■□□□ 1.28
TNIP1-221ENST00000610874 NPC1L1Q9UHC9 1359 aa23.04■■□□□ 1.28
TNIP1-221ENST00000610874 RGS3P49796 1198 aa23.03■■□□□ 1.28
TNIP1-221ENST00000610874 ZNF521Q96K83 1311 aa23.03■■□□□ 1.28
TNIP1-221ENST00000610874 PTPRMP28827 1452 aa23.02■■□□□ 1.28
TNIP1-221ENST00000610874 FAM161AQ3B820 660 aa23.02■■□□□ 1.28
TNIP1-221ENST00000610874 NFKBIBQ15653 356 aa23■■□□□ 1.27
TNIP1-221ENST00000610874 C8orf34Q49A92 452 aa23■■□□□ 1.27
TNIP1-221ENST00000610874 TNRQ92752 1358 aa23■■□□□ 1.27
TNIP1-221ENST00000610874 SLFN5Q08AF3 891 aa22.99■■□□□ 1.27
TNIP1-221ENST00000610874 CDK19Q9BWU1 502 aa22.99■■□□□ 1.27
TNIP1-221ENST00000610874 TXNDC2Q86VQ3 553 aa22.98■■□□□ 1.27
TNIP1-221ENST00000610874 CGNL1Q0VF96 1302 aa22.97■■□□□ 1.27
TNIP1-221ENST00000610874 SPINK5Q9NQ38 1064 aaPredicted RBP22.96■■□□□ 1.27
TNIP1-221ENST00000610874 METP08581 1390 aa22.96■■□□□ 1.27
TNIP1-221ENST00000610874 APAF1O14727 1248 aa22.96■■□□□ 1.27
TNIP1-221ENST00000610874 A0A1W2PP64 1363 aa22.95■■□□□ 1.26
TNIP1-221ENST00000610874 GGNBP2Q9H3C7 697 aa22.95■■□□□ 1.26
TNIP1-221ENST00000610874 ANKRD36BQ8N2N9 1353 aa22.94■■□□□ 1.26
TNIP1-221ENST00000610874 BCAR3O75815 825 aa22.94■■□□□ 1.26
TNIP1-221ENST00000610874 GSE1Q14687 1217 aa22.94■■□□□ 1.26
TNIP1-221ENST00000610874 CABP1Q9NZU7 370 aa22.94■■□□□ 1.26
TNIP1-221ENST00000610874 MTHFSP49914 203 aa22.93■■□□□ 1.26
TNIP1-221ENST00000610874 ANO8Q9HCE9 1232 aaPredicted RBP22.92■■□□□ 1.26
TNIP1-221ENST00000610874 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.91■■□□□ 1.26
TNIP1-221ENST00000610874 LTKP29376 864 aa22.9■■□□□ 1.26
TNIP1-221ENST00000610874 PUS7Q96PZ0 661 aaKnown RBP22.9■■□□□ 1.26
TNIP1-221ENST00000610874 NKTRP30414 1462 aaKnown RBP22.89■■□□□ 1.26
TNIP1-221ENST00000610874 TRMT2AQ8IZ69 625 aaKnown RBP22.89■■□□□ 1.25
TNIP1-221ENST00000610874 NCKAP5LQ9HCH0 1330 aa22.88■■□□□ 1.25
TNIP1-221ENST00000610874 BRPF3Q9ULD4 1205 aa22.88■■□□□ 1.25
TNIP1-221ENST00000610874 SLC26A8Q96RN1 970 aa22.88■■□□□ 1.25
TNIP1-221ENST00000610874 NEUROD2Q15784 382 aa22.87■■□□□ 1.25
TNIP1-221ENST00000610874 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.87■■□□□ 1.25
TNIP1-221ENST00000610874 FRAT1Q92837 279 aaPredicted RBP22.87■■□□□ 1.25
TNIP1-221ENST00000610874 TMEM2Q9UHN6 1383 aa22.87■■□□□ 1.25
TNIP1-221ENST00000610874 TERF2IPQ9NYB0 399 aa22.87■■□□□ 1.25
TNIP1-221ENST00000610874 DMRT2Q9Y5R5 561 aa22.87■■□□□ 1.25
TNIP1-221ENST00000610874 ATAD2Q6PL18 1390 aa22.86■■□□□ 1.25
TNIP1-221ENST00000610874 NRXN3Q9Y4C0 1643 aa22.85■■□□□ 1.25
TNIP1-221ENST00000610874 HDGFP51858 240 aaKnown RBP22.85■■□□□ 1.25
TNIP1-221ENST00000610874 E9PSI1 815 aa22.85■■□□□ 1.25
TNIP1-221ENST00000610874 FBLN1P23142 703 aa22.85■■□□□ 1.25
TNIP1-221ENST00000610874 RRP7AQ9Y3A4 280 aaKnown RBP22.85■■□□□ 1.25
TNIP1-221ENST00000610874 FYB1O15117 783 aa22.84■■□□□ 1.25
TNIP1-221ENST00000610874 NUTM2FA1L443 756 aa22.84■■□□□ 1.25
TNIP1-221ENST00000610874 IGHDP01880 384 aa22.84■■□□□ 1.25
TNIP1-221ENST00000610874 POLR3AO14802 1390 aaPredicted RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms