RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 MINK1Q8N4C8 1332 aaPredicted RBP15.78■□□□□ 0.12
USP6NL-205ENST00000609104 KRI1Q8N9T8 703 aaKnown RBP15.78■□□□□ 0.12
USP6NL-205ENST00000609104 DIAPH1O60610 1272 aaKnown RBP15.77■□□□□ 0.12
USP6NL-205ENST00000609104 H0YHG0 523 aa15.77■□□□□ 0.11
USP6NL-205ENST00000609104 API5Q9BZZ5 524 aaKnown RBP15.77■□□□□ 0.11
USP6NL-205ENST00000609104 UACAQ9BZF9 1416 aa15.76■□□□□ 0.11
USP6NL-205ENST00000609104 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.76■□□□□ 0.11
USP6NL-205ENST00000609104 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
USP6NL-205ENST00000609104 RALYLQ86SE5 291 aaKnown RBP15.76■□□□□ 0.11
USP6NL-205ENST00000609104 SDF4Q9BRK5 362 aa15.76■□□□□ 0.11
USP6NL-205ENST00000609104 CAVIN1Q6NZI2 390 aaKnown RBP15.75■□□□□ 0.11
USP6NL-205ENST00000609104 ERC2O15083 957 aa15.75■□□□□ 0.11
USP6NL-205ENST00000609104 OFD1O75665 1012 aa15.75■□□□□ 0.11
USP6NL-205ENST00000609104 CWC15Q9P013 229 aaKnown RBP15.75■□□□□ 0.11
USP6NL-205ENST00000609104 TSPYL4Q9UJ04 414 aa15.75■□□□□ 0.11
USP6NL-205ENST00000609104 MTMR7Q9Y216 660 aa15.75■□□□□ 0.11
USP6NL-205ENST00000609104 CCDC173Q0VFZ6 552 aa15.75■□□□□ 0.11
USP6NL-205ENST00000609104 FHOD3Q2V2M9 1422 aa15.75■□□□□ 0.11
USP6NL-205ENST00000609104 WASHC4Q2M389 1173 aa15.75■□□□□ 0.11
USP6NL-205ENST00000609104 TRAK2O60296 914 aa15.74■□□□□ 0.11
USP6NL-205ENST00000609104 NEUROD6Q96NK8 337 aa15.74■□□□□ 0.11
USP6NL-205ENST00000609104 RUNDC1Q96C34 613 aa15.74■□□□□ 0.11
USP6NL-205ENST00000609104 RDXP35241 583 aaKnown RBP15.74■□□□□ 0.11
USP6NL-205ENST00000609104 MRE11P49959 708 aa15.74■□□□□ 0.11
USP6NL-205ENST00000609104 HMOX1P09601 288 aa15.74■□□□□ 0.11
USP6NL-205ENST00000609104 SMC2O95347 1197 aa15.73■□□□□ 0.11
USP6NL-205ENST00000609104 RSPH4AQ5TD94 716 aa15.73■□□□□ 0.11
USP6NL-205ENST00000609104 PANK1Q8TE04 598 aa15.73■□□□□ 0.11
USP6NL-205ENST00000609104 WIZO95785 1651 aa15.73■□□□□ 0.11
USP6NL-205ENST00000609104 TRIM5Q9C035 493 aa15.73■□□□□ 0.11
USP6NL-205ENST00000609104 RIC3Q7Z5B4 369 aa15.73■□□□□ 0.11
USP6NL-205ENST00000609104 AIMP1Q12904 312 aaKnown RBP15.73■□□□□ 0.11
USP6NL-205ENST00000609104 CCDC191Q8NCU4 936 aa15.73■□□□□ 0.11
USP6NL-205ENST00000609104 BRMS1Q9HCU9 246 aa15.72■□□□□ 0.11
USP6NL-205ENST00000609104 DCTN1Q14203 1278 aa15.72■□□□□ 0.11
USP6NL-205ENST00000609104 PSME1Q06323 249 aa15.72■□□□□ 0.11
USP6NL-205ENST00000609104 NINLQ9Y2I6 1382 aa15.72■□□□□ 0.11
USP6NL-205ENST00000609104 SPC24Q8NBT2 197 aa15.72■□□□□ 0.11
USP6NL-205ENST00000609104 RBM10P98175 930 aaKnown RBP15.71■□□□□ 0.11
USP6NL-205ENST00000609104 BRPF1P55201 1214 aaPredicted RBP15.71■□□□□ 0.11
USP6NL-205ENST00000609104 ERCC4Q92889 916 aaPredicted RBP15.71■□□□□ 0.11
USP6NL-205ENST00000609104 CWC22Q9HCG8 908 aaKnown RBP15.71■□□□□ 0.11
USP6NL-205ENST00000609104 TDRD9Q8NDG6 1382 aaKnown RBP15.7■□□□□ 0.1
USP6NL-205ENST00000609104 DHX57Q6P158 1386 aaKnown RBP15.7■□□□□ 0.1
USP6NL-205ENST00000609104 LETM1O95202 739 aaPredicted RBP15.7■□□□□ 0.1
USP6NL-205ENST00000609104 CNTROBQ8N137 903 aa15.7■□□□□ 0.1
USP6NL-205ENST00000609104 MTERF4Q7Z6M4 381 aaKnown RBP15.7■□□□□ 0.1
USP6NL-205ENST00000609104 XBP1P17861 261 aa15.7■□□□□ 0.1
USP6NL-205ENST00000609104 VGFO15240 615 aaPredicted RBP15.7■□□□□ 0.1
USP6NL-205ENST00000609104 PLCD4Q9BRC7 762 aa15.7■□□□□ 0.1
USP6NL-205ENST00000609104 TSPY26PQ9H489 355 aa15.69■□□□□ 0.1
USP6NL-205ENST00000609104 MYO6Q9UM54 1294 aa15.69■□□□□ 0.1
USP6NL-205ENST00000609104 PSMA5P28066 241 aa15.69■□□□□ 0.1
USP6NL-205ENST00000609104 FMNL2Q96PY5 1086 aa15.69■□□□□ 0.1
USP6NL-205ENST00000609104 HSP90AB4PQ58FF6 505 aa15.69■□□□□ 0.1
USP6NL-205ENST00000609104 PRPF40AO75400 957 aaKnown RBP15.68■□□□□ 0.1
USP6NL-205ENST00000609104 CDC45O75419 566 aa15.68■□□□□ 0.1
USP6NL-205ENST00000609104 CEBPZQ03701 1054 aaKnown RBP15.68■□□□□ 0.1
USP6NL-205ENST00000609104 RBM33Q96EV2 1170 aaKnown RBP15.68■□□□□ 0.1
USP6NL-205ENST00000609104 LEKR1Q6ZMV7 388 aa15.67■□□□□ 0.1
USP6NL-205ENST00000609104 SMARCE1Q969G3 411 aa15.67■□□□□ 0.1
USP6NL-205ENST00000609104 KINO60870 393 aaKnown RBP15.67■□□□□ 0.1
USP6NL-205ENST00000609104 CCDC66A2RUB6 948 aa15.67■□□□□ 0.1
USP6NL-205ENST00000609104 UBTFL1P0CB47 393 aaPredicted RBP15.66■□□□□ 0.1
USP6NL-205ENST00000609104 FILIP1LQ4L180 1135 aa15.66■□□□□ 0.1
USP6NL-205ENST00000609104 MAGEC2Q9UBF1 373 aaPredicted RBP15.66■□□□□ 0.1
USP6NL-205ENST00000609104 AXDND1Q5T1B0 1012 aaPredicted RBP15.66■□□□□ 0.1
USP6NL-205ENST00000609104 IKQ13123 557 aaPredicted RBP15.66■□□□□ 0.1
USP6NL-205ENST00000609104 TSPYL1Q9H0U9 437 aa15.66■□□□□ 0.1
USP6NL-205ENST00000609104 ATP2B1P20020 1258 aa15.66■□□□□ 0.1
USP6NL-205ENST00000609104 GNAI1P63096 354 aa15.65■□□□□ 0.1
USP6NL-205ENST00000609104 NEFHP12036 1026 aa15.65■□□□□ 0.1
USP6NL-205ENST00000609104 BRPF3Q9ULD4 1205 aa15.64■□□□□ 0.09
USP6NL-205ENST00000609104 FSD1Q9BTV5 496 aa15.63■□□□□ 0.09
USP6NL-205ENST00000609104 NEK4P51957 841 aa15.63■□□□□ 0.09
USP6NL-205ENST00000609104 RAPGEF2Q9Y4G8 1499 aa15.63■□□□□ 0.09
USP6NL-205ENST00000609104 CT47B1P0C2W7 299 aaPredicted RBP15.63■□□□□ 0.09
USP6NL-205ENST00000609104 HSP90AB3PQ58FF7 597 aa15.63■□□□□ 0.09
USP6NL-205ENST00000609104 DHX37Q8IY37 1157 aaKnown RBP15.62■□□□□ 0.09
USP6NL-205ENST00000609104 CDK5RAP3Q96JB5 506 aa15.62■□□□□ 0.09
USP6NL-205ENST00000609104 FIBPO43427 364 aa15.62■□□□□ 0.09
USP6NL-205ENST00000609104 CCP110O43303 1012 aa15.61■□□□□ 0.09
USP6NL-205ENST00000609104 DNAJC2Q99543 621 aaKnown RBP15.61■□□□□ 0.09
USP6NL-205ENST00000609104 MROH2BQ7Z745 1585 aa15.61■□□□□ 0.09
USP6NL-205ENST00000609104 TMEM132AQ24JP5 1023 aa15.61■□□□□ 0.09
USP6NL-205ENST00000609104 SYCP1Q15431 976 aa15.61■□□□□ 0.09
USP6NL-205ENST00000609104 MBD3O95983 291 aa15.61■□□□□ 0.09
USP6NL-205ENST00000609104 C1orf115Q9H7X2 142 aa15.61■□□□□ 0.09
USP6NL-205ENST00000609104 MPNDQ8N594 471 aa15.6■□□□□ 0.09
USP6NL-205ENST00000609104 SART3Q15020 963 aaKnown RBP15.6■□□□□ 0.09
USP6NL-205ENST00000609104 FAM177A1Q8N128 213 aaPredicted RBP15.6■□□□□ 0.09
USP6NL-205ENST00000609104 SERPINC1P01008 464 aa15.6■□□□□ 0.09
USP6NL-205ENST00000609104 TXLNAP40222 546 aa15.6■□□□□ 0.09
USP6NL-205ENST00000609104 CLASRPQ8N2M8 674 aaKnown RBP15.6■□□□□ 0.09
USP6NL-205ENST00000609104 PDS5BQ9NTI5 1447 aa15.59■□□□□ 0.09
USP6NL-205ENST00000609104 SURF6O75683 361 aaKnown RBP15.59■□□□□ 0.09
USP6NL-205ENST00000609104 SEPT7Q16181 437 aaKnown RBP15.59■□□□□ 0.09
USP6NL-205ENST00000609104 STK11IPQ8N1F8 1099 aa15.59■□□□□ 0.09
USP6NL-205ENST00000609104 MEX3CQ5U5Q3 659 aaKnown RBP15.59■□□□□ 0.09
USP6NL-205ENST00000609104 IL27Q8NEV9 243 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms