RNA–Protein interactions for RNA: ENST00000607427.1

CTSS-206, Transcript of cathepsin S, humanhuman

TSL 2

Gene CTSS, Length 390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-206ENST00000607427 LCE2CQ5TA81 110 aa11.24□□□□□ -0.61
CTSS-206ENST00000607427 SNIP1Q8TAD8 396 aaKnown RBP11.24□□□□□ -0.61
CTSS-206ENST00000607427 GNPATO15228 680 aa11.23□□□□□ -0.61
CTSS-206ENST00000607427 SNRPBP14678 240 aaKnown RBP11.23□□□□□ -0.61
CTSS-206ENST00000607427 RNF19BQ6ZMZ0 732 aa11.23□□□□□ -0.61
CTSS-206ENST00000607427 SULF1Q8IWU6 871 aa11.23□□□□□ -0.61
CTSS-206ENST00000607427 TRIM32Q13049 653 aa11.22□□□□□ -0.61
CTSS-206ENST00000607427 NLRP7Q8WX94 980 aa11.22□□□□□ -0.61
CTSS-206ENST00000607427 TRIM47Q96LD4 638 aa11.22□□□□□ -0.61
CTSS-206ENST00000607427 TERTO14746 1132 aaKnown RBP11.21□□□□□ -0.61
CTSS-206ENST00000607427 RBM26Q5T8P6 1007 aaKnown RBP11.21□□□□□ -0.61
CTSS-206ENST00000607427 GPR37O15354 613 aa11.2□□□□□ -0.62
CTSS-206ENST00000607427 MRGPRX2Q96LB1 330 aa11.2□□□□□ -0.62
CTSS-206ENST00000607427 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
CTSS-206ENST00000607427 J3QL48 77 aa11.19□□□□□ -0.62
CTSS-206ENST00000607427 MMP16P51512 607 aa11.18□□□□□ -0.62
CTSS-206ENST00000607427 GRIPAP1Q4V328 841 aa11.17□□□□□ -0.62
CTSS-206ENST00000607427 TESPA1A2RU30 521 aaPredicted RBP11.16□□□□□ -0.62
CTSS-206ENST00000607427 PHOX2BQ99453 314 aa11.16□□□□□ -0.62
CTSS-206ENST00000607427 Q3C1V9 767 aa11.15□□□□□ -0.62
CTSS-206ENST00000607427 HPS1Q92902 700 aa11.15□□□□□ -0.62
CTSS-206ENST00000607427 REPIN1Q9BWE0 567 aaKnown RBP11.15□□□□□ -0.62
CTSS-206ENST00000607427 KIFC2Q96AC6 838 aa11.14□□□□□ -0.63
CTSS-206ENST00000607427 DXOO77932 396 aaKnown RBP11.12□□□□□ -0.63
CTSS-206ENST00000607427 SMYD5Q6GMV2 418 aa11.12□□□□□ -0.63
CTSS-206ENST00000607427 USB1Q9BQ65 265 aaKnown RBP11.09□□□□□ -0.63
CTSS-206ENST00000607427 WNT7BP56706 349 aa11.07□□□□□ -0.64
CTSS-206ENST00000607427 RC3H1Q5TC82 1133 aaKnown RBP11.07□□□□□ -0.64
CTSS-206ENST00000607427 CD46P15529 392 aa11.06□□□□□ -0.64
CTSS-206ENST00000607427 SKOR1P84550 965 aa11.06□□□□□ -0.64
CTSS-206ENST00000607427 SLC16A10Q8TF71 515 aa11.04□□□□□ -0.64
CTSS-206ENST00000607427 FAM181BA6NEQ2 426 aa11.03□□□□□ -0.64
CTSS-206ENST00000607427 KDM4AO75164 1064 aa11.03□□□□□ -0.64
CTSS-206ENST00000607427 CCDC24Q8N4L8 307 aa11.03□□□□□ -0.64
CTSS-206ENST00000607427 NXF1Q9UBU9 619 aaKnown RBP11.02□□□□□ -0.65
CTSS-206ENST00000607427 ALDH1A1P00352 501 aa11.01□□□□□ -0.65
CTSS-206ENST00000607427 USP46P62068 366 aa11□□□□□ -0.65
CTSS-206ENST00000607427 HLA-CQ95604 372 aa11□□□□□ -0.65
CTSS-206ENST00000607427 LORP23490 312 aaPredicted RBP10.99□□□□□ -0.65
CTSS-206ENST00000607427 GMPRP36959 345 aa10.99□□□□□ -0.65
CTSS-206ENST00000607427 BMP1P13497 986 aa10.98□□□□□ -0.65
CTSS-206ENST00000607427 GPIHBP1Q8IV16 184 aa10.98□□□□□ -0.65
CTSS-206ENST00000607427 NPAS3Q8IXF0 933 aa10.98□□□□□ -0.65
CTSS-206ENST00000607427 TRIM46Q7Z4K8 759 aa10.97□□□□□ -0.65
CTSS-206ENST00000607427 ZSCAN1Q8NBB4 408 aa10.97□□□□□ -0.65
CTSS-206ENST00000607427 IRF7Q92985 503 aa10.97□□□□□ -0.65
CTSS-206ENST00000607427 HOXA2O43364 376 aa10.96□□□□□ -0.65
CTSS-206ENST00000607427 JUNDP17535 347 aa10.96□□□□□ -0.65
CTSS-206ENST00000607427 SIAH2O43255 324 aa10.95□□□□□ -0.66
CTSS-206ENST00000607427 H3BM21 787 aa10.94□□□□□ -0.66
CTSS-206ENST00000607427 CAPN5O15484 640 aaPredicted RBP10.94□□□□□ -0.66
CTSS-206ENST00000607427 EHBP1Q8NDI1 1231 aa10.93□□□□□ -0.66
CTSS-206ENST00000607427 PLCB2Q00722 1185 aa10.92□□□□□ -0.66
CTSS-206ENST00000607427 WASF2Q9Y6W5 498 aa10.92□□□□□ -0.66
CTSS-206ENST00000607427 VEGFBP49765 207 aa10.91□□□□□ -0.66
CTSS-206ENST00000607427 GUCA2AQ02747 115 aa10.91□□□□□ -0.66
CTSS-206ENST00000607427 MAP2K5Q13163 448 aa10.91□□□□□ -0.66
CTSS-206ENST00000607427 ERBB4Q15303 1308 aa10.9□□□□□ -0.66
CTSS-206ENST00000607427 LOC100996750A0A140TA64 210 aa10.9□□□□□ -0.66
CTSS-206ENST00000607427 PTCRAQ6ISU1 281 aaPredicted RBP10.9□□□□□ -0.66
CTSS-206ENST00000607427 NUDT12Q9BQG2 462 aa10.9□□□□□ -0.66
CTSS-206ENST00000607427 KRTAP4-6Q9BYQ5 205 aa10.9□□□□□ -0.66
CTSS-206ENST00000607427 MDM2Q00987 491 aaPredicted RBP10.89□□□□□ -0.67
CTSS-206ENST00000607427 SYMPKQ92797 1274 aaKnown RBP10.88□□□□□ -0.67
CTSS-206ENST00000607427 RETREG3Q86VR2 466 aa10.87□□□□□ -0.67
CTSS-206ENST00000607427 SH3BP2P78314 561 aa10.86□□□□□ -0.67
CTSS-206ENST00000607427 IRF6O14896 467 aa10.85□□□□□ -0.67
CTSS-206ENST00000607427 ZFP42Q96MM3 310 aa10.85□□□□□ -0.67
CTSS-206ENST00000607427 CCNYL3P0C7X3 344 aa10.83□□□□□ -0.68
CTSS-206ENST00000607427 TLL2Q9Y6L7 1015 aa10.82□□□□□ -0.68
CTSS-206ENST00000607427 MS4A1P11836 297 aa10.81□□□□□ -0.68
CTSS-206ENST00000607427 FAM217BQ9NTX9 383 aaPredicted RBP10.8□□□□□ -0.68
CTSS-206ENST00000607427 NUTM1Q86Y26 1132 aa10.79□□□□□ -0.68
CTSS-206ENST00000607427 UNC93B1Q9H1C4 597 aa10.79□□□□□ -0.68
CTSS-206ENST00000607427 GPCPD1Q9NPB8 672 aa10.79□□□□□ -0.68
CTSS-206ENST00000607427 MINK1Q8N4C8 1332 aaPredicted RBP10.79□□□□□ -0.68
CTSS-206ENST00000607427 VSIG8P0DPA2 414 aa10.78□□□□□ -0.68
CTSS-206ENST00000607427 CLCN1P35523 988 aa10.78□□□□□ -0.68
CTSS-206ENST00000607427 PTPRNQ16849 979 aa10.78□□□□□ -0.68
CTSS-206ENST00000607427 MRPL14Q6P1L8 145 aaKnown RBP10.78□□□□□ -0.68
CTSS-206ENST00000607427 PCDHGC3Q9UN70 934 aa10.78□□□□□ -0.68
CTSS-206ENST00000607427 FDX1P10109 184 aa10.77□□□□□ -0.69
CTSS-206ENST00000607427 NNTQ13423 1086 aa10.77□□□□□ -0.69
CTSS-206ENST00000607427 MPNDQ8N594 471 aa10.77□□□□□ -0.69
CTSS-206ENST00000607427 CCDC102AQ96A19 550 aa10.77□□□□□ -0.69
CTSS-206ENST00000607427 PLEKHG3A1L390 1219 aa10.76□□□□□ -0.69
CTSS-206ENST00000607427 C6orf229H3BNL8 230 aa10.76□□□□□ -0.69
CTSS-206ENST00000607427 LINC01559Q495D7 138 aa10.76□□□□□ -0.69
CTSS-206ENST00000607427 EVA1BQ9NVM1 165 aa10.76□□□□□ -0.69
CTSS-206ENST00000607427 TIMP2P16035 220 aa10.75□□□□□ -0.69
CTSS-206ENST00000607427 SCARF1Q14162 830 aa10.75□□□□□ -0.69
CTSS-206ENST00000607427 BAP1Q92560 729 aa10.75□□□□□ -0.69
CTSS-206ENST00000607427 PURBQ96QR8 312 aaKnown RBP10.75□□□□□ -0.69
CTSS-206ENST00000607427 ADH1CP00326 375 aa10.74□□□□□ -0.69
CTSS-206ENST00000607427 VARSP26640 1264 aaKnown RBP10.74□□□□□ -0.69
CTSS-206ENST00000607427 ZNF511Q8NB15 262 aa10.74□□□□□ -0.69
CTSS-206ENST00000607427 KCNH2Q12809 1159 aa10.72□□□□□ -0.69
CTSS-206ENST00000607427 SOBPA7XYQ1 873 aa10.71□□□□□ -0.69
CTSS-206ENST00000607427 HAP1P54257 671 aaPredicted RBP10.71□□□□□ -0.69
CTSS-206ENST00000607427 WDR4P57081 412 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms