RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 KIF14Q15058 1648 aa8.16□□□□□ -1.1
RPF2-204ENST00000607388 CGNL1Q0VF96 1302 aa8.16□□□□□ -1.1
RPF2-204ENST00000607388 VSIG10Q8N0Z9 540 aa8.16□□□□□ -1.1
RPF2-204ENST00000607388 RARSP54136 660 aaKnown RBP8.16□□□□□ -1.1
RPF2-204ENST00000607388 ZKSCAN2Q63HK3 967 aa8.16□□□□□ -1.1
RPF2-204ENST00000607388 PMFBP1Q8TBY8 1022 aa8.15□□□□□ -1.1
RPF2-204ENST00000607388 SCAPERQ9BY12 1400 aa8.15□□□□□ -1.1
RPF2-204ENST00000607388 LRRIQ1Q96JM4 1722 aa8.15□□□□□ -1.1
RPF2-204ENST00000607388 WASHC2CQ9Y4E1 1318 aa8.15□□□□□ -1.11
RPF2-204ENST00000607388 TRAK2O60296 914 aa8.15□□□□□ -1.11
RPF2-204ENST00000607388 RUNDC1Q96C34 613 aa8.15□□□□□ -1.11
RPF2-204ENST00000607388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.14□□□□□ -1.11
RPF2-204ENST00000607388 TMEM57Q8N5G2 664 aa8.14□□□□□ -1.11
RPF2-204ENST00000607388 SSH1Q8WYL5 1049 aa8.14□□□□□ -1.11
RPF2-204ENST00000607388 CHAMP1Q96JM3 812 aa8.14□□□□□ -1.11
RPF2-204ENST00000607388 CFAP65Q6ZU64 1925 aaKnown RBP8.14□□□□□ -1.11
RPF2-204ENST00000607388 UHRF1BP1LA0JNW5 1464 aa8.14□□□□□ -1.11
RPF2-204ENST00000607388 MYH16Q9H6N6 1097 aa8.14□□□□□ -1.11
RPF2-204ENST00000607388 RRAGDQ9NQL2 400 aaPredicted RBP8.14□□□□□ -1.11
RPF2-204ENST00000607388 UBE2Q2Q8WVN8 375 aa8.14□□□□□ -1.11
RPF2-204ENST00000607388 KDM2BQ8NHM5 1336 aa8.13□□□□□ -1.11
RPF2-204ENST00000607388 FANCAO15360 1455 aa8.13□□□□□ -1.11
RPF2-204ENST00000607388 TCOF1Q13428 1488 aaKnown RBP8.13□□□□□ -1.11
RPF2-204ENST00000607388 MIS18AQ9NYP9 233 aa8.13□□□□□ -1.11
RPF2-204ENST00000607388 RNF214Q8ND24 703 aa8.12□□□□□ -1.11
RPF2-204ENST00000607388 ANP32BQ92688 251 aaKnown RBP8.12□□□□□ -1.11
RPF2-204ENST00000607388 ABCC10Q5T3U5 1492 aa8.12□□□□□ -1.11
RPF2-204ENST00000607388 PRAG1Q86YV5 1406 aa8.12□□□□□ -1.11
RPF2-204ENST00000607388 RBM10P98175 930 aaKnown RBP8.12□□□□□ -1.11
RPF2-204ENST00000607388 TRIM27P14373 513 aa8.11□□□□□ -1.11
RPF2-204ENST00000607388 PDE4CQ08493 712 aa8.11□□□□□ -1.11
RPF2-204ENST00000607388 TSHZ3Q63HK5 1081 aa8.11□□□□□ -1.11
RPF2-204ENST00000607388 LTV1Q96GA3 475 aaPredicted RBP8.11□□□□□ -1.11
RPF2-204ENST00000607388 DDX49Q9Y6V7 483 aaKnown RBP8.11□□□□□ -1.11
RPF2-204ENST00000607388 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.11□□□□□ -1.11
RPF2-204ENST00000607388 ATAD2Q6PL18 1390 aa8.11□□□□□ -1.11
RPF2-204ENST00000607388 RALGAPBQ86X10 1494 aa8.11□□□□□ -1.11
RPF2-204ENST00000607388 FAM83GA6ND36 823 aa8.11□□□□□ -1.11
RPF2-204ENST00000607388 XRCC6P12956 609 aaKnown RBP eCLIP8.11□□□□□ -1.11
RPF2-204ENST00000607388 PRKAR2BP31323 418 aa8.11□□□□□ -1.11
RPF2-204ENST00000607388 MCM4P33991 863 aa8.11□□□□□ -1.11
RPF2-204ENST00000607388 NSD3Q9BZ95 1437 aa8.11□□□□□ -1.11
RPF2-204ENST00000607388 SMARCA5O60264 1052 aaPredicted RBP8.1□□□□□ -1.11
RPF2-204ENST00000607388 RRS1Q15050 365 aaKnown RBP8.1□□□□□ -1.11
RPF2-204ENST00000607388 L1TD1Q5T7N2 865 aaKnown RBP8.1□□□□□ -1.11
RPF2-204ENST00000607388 LARP6Q9BRS8 491 aaKnown RBP8.1□□□□□ -1.11
RPF2-204ENST00000607388 TRAPPC8Q9Y2L5 1435 aa8.1□□□□□ -1.11
RPF2-204ENST00000607388 TTC37Q6PGP7 1564 aa8.1□□□□□ -1.11
RPF2-204ENST00000607388 ADGRL1O94910 1474 aa8.1□□□□□ -1.11
RPF2-204ENST00000607388 HAP1P54257 671 aaPredicted RBP8.1□□□□□ -1.11
RPF2-204ENST00000607388 KRT24Q2M2I5 525 aa8.1□□□□□ -1.11
RPF2-204ENST00000607388 DNTTIP2Q5QJE6 756 aaKnown RBP8.1□□□□□ -1.11
RPF2-204ENST00000607388 NUTM2GQ5VZR2 741 aa8.1□□□□□ -1.11
RPF2-204ENST00000607388 PKNOX2Q96KN3 472 aa8.1□□□□□ -1.11
RPF2-204ENST00000607388 ESF1Q9H501 851 aaKnown RBP8.1□□□□□ -1.11
RPF2-204ENST00000607388 KANK1Q14678 1352 aa8.1□□□□□ -1.11
RPF2-204ENST00000607388 PLCH2O75038 1416 aa8.1□□□□□ -1.11
RPF2-204ENST00000607388 MCTP1Q6DN14 999 aa8.1□□□□□ -1.11
RPF2-204ENST00000607388 PTMAP06454 111 aaKnown RBP8.09□□□□□ -1.11
RPF2-204ENST00000607388 MVPQ14764 893 aaKnown RBP8.09□□□□□ -1.11
RPF2-204ENST00000607388 ZRANB1Q9UGI0 708 aa8.09□□□□□ -1.11
RPF2-204ENST00000607388 MAGI2Q86UL8 1455 aa8.09□□□□□ -1.11
RPF2-204ENST00000607388 PDE3AQ14432 1141 aa8.09□□□□□ -1.11
RPF2-204ENST00000607388 WAPLQ7Z5K2 1190 aa8.09□□□□□ -1.11
RPF2-204ENST00000607388 C16orf71Q8IYS4 520 aaPredicted RBP8.09□□□□□ -1.11
RPF2-204ENST00000607388 CABP1Q9NZU7 370 aa8.09□□□□□ -1.11
RPF2-204ENST00000607388 NCKAP5LQ9HCH0 1330 aa8.09□□□□□ -1.11
RPF2-204ENST00000607388 CHMP3Q9Y3E7 222 aa8.09□□□□□ -1.11
RPF2-204ENST00000607388 A2MP01023 1474 aa8.08□□□□□ -1.12
RPF2-204ENST00000607388 COL17A1Q9UMD9 1497 aaPredicted RBP8.08□□□□□ -1.12
RPF2-204ENST00000607388 RSPH4AQ5TD94 716 aa8.08□□□□□ -1.12
RPF2-204ENST00000607388 PRAM1Q96QH2 718 aa8.08□□□□□ -1.12
RPF2-204ENST00000607388 CHMP5Q9NZZ3 219 aa8.08□□□□□ -1.12
RPF2-204ENST00000607388 NKTRP30414 1462 aaKnown RBP8.08□□□□□ -1.12
RPF2-204ENST00000607388 TRIM6-TRIM34B2RNG4 842 aa8.08□□□□□ -1.12
RPF2-204ENST00000607388 SSFA2P28290 1259 aa8.08□□□□□ -1.12
RPF2-204ENST00000607388 CAVIN1Q6NZI2 390 aaKnown RBP8.08□□□□□ -1.12
RPF2-204ENST00000607388 TSPYL6Q8N831 410 aa8.08□□□□□ -1.12
RPF2-204ENST00000607388 DIAPH1O60610 1272 aaKnown RBP8.07□□□□□ -1.12
RPF2-204ENST00000607388 TMPOP42166 694 aaKnown RBP8.07□□□□□ -1.12
RPF2-204ENST00000607388 CEBPAP49715 358 aaPredicted RBP8.07□□□□□ -1.12
RPF2-204ENST00000607388 HSP90AA2PQ14568 343 aaPredicted RBP8.07□□□□□ -1.12
RPF2-204ENST00000607388 DDX54Q8TDD1 881 aaKnown RBP8.07□□□□□ -1.12
RPF2-204ENST00000607388 RILPL2Q969X0 211 aa8.07□□□□□ -1.12
RPF2-204ENST00000607388 CCDC9Q9Y3X0 531 aaKnown RBP8.07□□□□□ -1.12
RPF2-204ENST00000607388 GOLGA6L22H0YM25 854 aa8.07□□□□□ -1.12
RPF2-204ENST00000607388 LMOD2Q6P5Q4 547 aa8.07□□□□□ -1.12
RPF2-204ENST00000607388 ATF7IPQ6VMQ6 1270 aa8.07□□□□□ -1.12
RPF2-204ENST00000607388 KDM5CP41229 1560 aa8.07□□□□□ -1.12
RPF2-204ENST00000607388 USP19O94966 1318 aa8.07□□□□□ -1.12
RPF2-204ENST00000607388 MAP4K4O95819 1239 aaPredicted RBP8.07□□□□□ -1.12
RPF2-204ENST00000607388 FAM13BQ9NYF5 915 aa8.07□□□□□ -1.12
RPF2-204ENST00000607388 EMILIN1Q9Y6C2 1016 aa8.07□□□□□ -1.12
RPF2-204ENST00000607388 DNMT1P26358 1616 aaKnown RBP8.06□□□□□ -1.12
RPF2-204ENST00000607388 EIF3AQ14152 1382 aaKnown RBP8.06□□□□□ -1.12
RPF2-204ENST00000607388 TBC1D32Q96NH3 1257 aa8.06□□□□□ -1.12
RPF2-204ENST00000607388 DDX19BQ9UMR2 479 aa8.06□□□□□ -1.12
RPF2-204ENST00000607388 SYCP2Q9BX26 1530 aa8.06□□□□□ -1.12
RPF2-204ENST00000607388 FAM135AQ9P2D6 1515 aa8.06□□□□□ -1.12
RPF2-204ENST00000607388 GPRASP1Q5JY77 1395 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms