RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
RFTN1-212ENST00000607320 LRP6O75581 1613 aa15.86■□□□□ 0.13
RFTN1-212ENST00000607320 ROBO2Q9HCK4 1378 aa15.86■□□□□ 0.13
RFTN1-212ENST00000607320 SPATA31E1Q6ZUB1 1445 aa15.85■□□□□ 0.13
RFTN1-212ENST00000607320 RGL3Q3MIN7 710 aa15.85■□□□□ 0.13
RFTN1-212ENST00000607320 C1orf167Q5SNV9 1468 aa15.84■□□□□ 0.13
RFTN1-212ENST00000607320 LRRC59Q96AG4 307 aaKnown RBP15.84■□□□□ 0.13
RFTN1-212ENST00000607320 ATF5Q9Y2D1 282 aaPredicted RBP15.84■□□□□ 0.13
RFTN1-212ENST00000607320 ZNF772Q68DY9 489 aaPredicted RBP15.83■□□□□ 0.12
RFTN1-212ENST00000607320 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
RFTN1-212ENST00000607320 ADGRF5Q8IZF2 1346 aa15.82■□□□□ 0.12
RFTN1-212ENST00000607320 LAMC1P11047 1609 aa15.81■□□□□ 0.12
RFTN1-212ENST00000607320 KNDC1Q76NI1 1749 aa15.8■□□□□ 0.12
RFTN1-212ENST00000607320 NUTM2BA6NNL0 878 aaPredicted RBP15.8■□□□□ 0.12
RFTN1-212ENST00000607320 NUTM2EB1AL46 878 aaPredicted RBP15.8■□□□□ 0.12
RFTN1-212ENST00000607320 NUTM2AQ8IVF1 878 aaPredicted RBP15.8■□□□□ 0.12
RFTN1-212ENST00000607320 CDC42BPGQ6DT37 1551 aa15.79■□□□□ 0.12
RFTN1-212ENST00000607320 TECPR2O15040 1411 aa15.79■□□□□ 0.12
RFTN1-212ENST00000607320 DDX17Q92841 729 aaKnown RBP15.79■□□□□ 0.12
RFTN1-212ENST00000607320 PIK3C2GO75747 1445 aa15.78■□□□□ 0.12
RFTN1-212ENST00000607320 LRPPRCP42704 1394 aaKnown RBP15.78■□□□□ 0.12
RFTN1-212ENST00000607320 RAB3GAP2Q9H2M9 1393 aa15.78■□□□□ 0.12
RFTN1-212ENST00000607320 PNPLA6Q8IY17 1366 aa15.77■□□□□ 0.12
RFTN1-212ENST00000607320 ABCC11Q96J66 1382 aa15.76■□□□□ 0.11
RFTN1-212ENST00000607320 ORAI2Q96SN7 254 aa15.76■□□□□ 0.11
RFTN1-212ENST00000607320 STK26Q9P289 416 aa15.76■□□□□ 0.11
RFTN1-212ENST00000607320 SOS2Q07890 1332 aaPredicted RBP15.75■□□□□ 0.11
RFTN1-212ENST00000607320 MYOM2P54296 1465 aa15.75■□□□□ 0.11
RFTN1-212ENST00000607320 TMEM132EQ6IEE7 984 aa15.74■□□□□ 0.11
RFTN1-212ENST00000607320 YTHDC2Q9H6S0 1430 aaKnown RBP15.74■□□□□ 0.11
RFTN1-212ENST00000607320 AFF2P51816 1311 aa15.73■□□□□ 0.11
RFTN1-212ENST00000607320 NPHP3Q7Z494 1330 aa15.73■□□□□ 0.11
RFTN1-212ENST00000607320 ESCO1Q5FWF5 840 aa15.73■□□□□ 0.11
RFTN1-212ENST00000607320 WAPLQ7Z5K2 1190 aa15.73■□□□□ 0.11
RFTN1-212ENST00000607320 NRXN1Q9ULB1 1477 aa15.72■□□□□ 0.11
RFTN1-212ENST00000607320 RXRBP28702 533 aa15.72■□□□□ 0.11
RFTN1-212ENST00000607320 C8orf37Q96NL8 207 aa15.72■□□□□ 0.11
RFTN1-212ENST00000607320 C14orf93Q9H972 538 aaKnown RBP15.72■□□□□ 0.11
RFTN1-212ENST00000607320 U3KPZ7 1027 aaPredicted RBP15.72■□□□□ 0.11
RFTN1-212ENST00000607320 DHX57Q6P158 1386 aaKnown RBP15.72■□□□□ 0.11
RFTN1-212ENST00000607320 SIRT1Q96EB6 747 aa15.71■□□□□ 0.11
RFTN1-212ENST00000607320 FMN2Q9NZ56 1722 aa15.71■□□□□ 0.1
RFTN1-212ENST00000607320 COL22A1Q8NFW1 1626 aaPredicted RBP15.7■□□□□ 0.1
RFTN1-212ENST00000607320 CDK12Q9NYV4 1490 aaPredicted RBP15.7■□□□□ 0.1
RFTN1-212ENST00000607320 HRCP23327 699 aa15.69■□□□□ 0.1
RFTN1-212ENST00000607320 PLEKHH1Q9ULM0 1364 aa15.69■□□□□ 0.1
RFTN1-212ENST00000607320 KIF1AQ12756 1690 aa15.69■□□□□ 0.1
RFTN1-212ENST00000607320 ADAMTS2O95450 1211 aa15.68■□□□□ 0.1
RFTN1-212ENST00000607320 CFAP70Q5T0N1 1121 aa15.68■□□□□ 0.1
RFTN1-212ENST00000607320 NGLY1Q96IV0 654 aa15.68■□□□□ 0.1
RFTN1-212ENST00000607320 PXDNQ92626 1479 aa15.67■□□□□ 0.1
RFTN1-212ENST00000607320 NUTM2FA1L443 756 aa15.67■□□□□ 0.1
RFTN1-212ENST00000607320 FOXO3O43524 673 aa15.67■□□□□ 0.1
RFTN1-212ENST00000607320 MARF1Q9Y4F3 1742 aaKnown RBP15.66■□□□□ 0.1
RFTN1-212ENST00000607320 QTRT2Q9H974 415 aaKnown RBP15.66■□□□□ 0.1
RFTN1-212ENST00000607320 RGPD8O14715 1765 aaPredicted RBP15.66■□□□□ 0.1
RFTN1-212ENST00000607320 DLC1Q96QB1 1528 aa15.65■□□□□ 0.1
RFTN1-212ENST00000607320 RBM6P78332 1123 aaKnown RBP15.65■□□□□ 0.1
RFTN1-212ENST00000607320 STAC3Q96MF2 364 aa15.65■□□□□ 0.1
RFTN1-212ENST00000607320 XPCQ01831 940 aaPredicted RBP15.63■□□□□ 0.09
RFTN1-212ENST00000607320 PRAM1Q96QH2 718 aa15.63■□□□□ 0.09
RFTN1-212ENST00000607320 POGKQ9P215 609 aa15.63■□□□□ 0.09
RFTN1-212ENST00000607320 USP21Q9UK80 565 aa15.63■□□□□ 0.09
RFTN1-212ENST00000607320 DCAF11Q8TEB1 546 aa15.62■□□□□ 0.09
RFTN1-212ENST00000607320 SAFB2Q14151 953 aaKnown RBP eCLIP15.61■□□□□ 0.09
RFTN1-212ENST00000607320 FNBP4Q8N3X1 1017 aaPredicted RBP15.61■□□□□ 0.09
RFTN1-212ENST00000607320 UPF1Q92900 1129 aaKnown RBP eCLIP15.61■□□□□ 0.09
RFTN1-212ENST00000607320 TRPC5Q9UL62 973 aaPredicted RBP15.61■□□□□ 0.09
RFTN1-212ENST00000607320 KDM2AQ9Y2K7 1162 aa15.61■□□□□ 0.09
RFTN1-212ENST00000607320 ADGRB1O14514 1584 aa15.61■□□□□ 0.09
RFTN1-212ENST00000607320 PHF8Q9UPP1 1060 aa15.6■□□□□ 0.09
RFTN1-212ENST00000607320 ADGRB2O60241 1585 aa15.6■□□□□ 0.09
RFTN1-212ENST00000607320 RGS12O14924 1447 aa15.6■□□□□ 0.09
RFTN1-212ENST00000607320 PSME1Q06323 249 aa15.59■□□□□ 0.09
RFTN1-212ENST00000607320 KRT28Q7Z3Y7 464 aa15.59■□□□□ 0.09
RFTN1-212ENST00000607320 SPATA31A3Q5VYP0 1347 aa15.59■□□□□ 0.09
RFTN1-212ENST00000607320 TRAK1Q9UPV9 953 aa15.58■□□□□ 0.08
RFTN1-212ENST00000607320 ANKARQ7Z5J8 1434 aa15.58■□□□□ 0.08
RFTN1-212ENST00000607320 EIF3AQ14152 1382 aaKnown RBP15.57■□□□□ 0.08
RFTN1-212ENST00000607320 ATRNO75882 1429 aa15.57■□□□□ 0.08
RFTN1-212ENST00000607320 TNS3Q68CZ2 1445 aa15.57■□□□□ 0.08
RFTN1-212ENST00000607320 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.57■□□□□ 0.08
RFTN1-212ENST00000607320 USP32Q8NFA0 1604 aa15.56■□□□□ 0.08
RFTN1-212ENST00000607320 SBNO1A3KN83 1393 aa15.55■□□□□ 0.08
RFTN1-212ENST00000607320 ARHGEF28Q8N1W1 1705 aaKnown RBP15.54■□□□□ 0.08
RFTN1-212ENST00000607320 BCL9LQ86UU0 1499 aa15.54■□□□□ 0.08
RFTN1-212ENST00000607320 HAP1P54257 671 aaPredicted RBP15.54■□□□□ 0.08
RFTN1-212ENST00000607320 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
RFTN1-212ENST00000607320 ARHGEF10O15013 1369 aa15.53■□□□□ 0.08
RFTN1-212ENST00000607320 MINK1Q8N4C8 1332 aaPredicted RBP15.53■□□□□ 0.08
RFTN1-212ENST00000607320 HIRIP3Q9BW71 556 aaPredicted RBP15.53■□□□□ 0.08
RFTN1-212ENST00000607320 KIAA1210Q9ULL0 1709 aa15.53■□□□□ 0.08
RFTN1-212ENST00000607320 TULP4Q9NRJ4 1543 aa15.53■□□□□ 0.08
RFTN1-212ENST00000607320 ATAD2Q6PL18 1390 aa15.52■□□□□ 0.08
RFTN1-212ENST00000607320 PMFBP1Q8TBY8 1022 aa15.52■□□□□ 0.08
RFTN1-212ENST00000607320 ITSN1Q15811 1721 aa15.51■□□□□ 0.07
RFTN1-212ENST00000607320 ABCA3Q99758 1704 aa15.51■□□□□ 0.07
RFTN1-212ENST00000607320 WASLO00401 505 aaPredicted RBP15.51■□□□□ 0.07
RFTN1-212ENST00000607320 LMOD2Q6P5Q4 547 aa15.51■□□□□ 0.07
RFTN1-212ENST00000607320 SLIT2O94813 1529 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms