RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 ESCO1Q5FWF5 840 aa23.83■■□□□ 1.41
LINC00240-203ENST00000606878 PCGF6Q9BYE7 350 aa23.82■■□□□ 1.4
LINC00240-203ENST00000606878 NALCNQ8IZF0 1738 aa23.81■■□□□ 1.4
LINC00240-203ENST00000606878 JCADQ9P266 1359 aa23.81■■□□□ 1.4
LINC00240-203ENST00000606878 NUTM2FA1L443 756 aa23.81■■□□□ 1.4
LINC00240-203ENST00000606878 LRRC59Q96AG4 307 aaKnown RBP23.81■■□□□ 1.4
LINC00240-203ENST00000606878 ADGRB1O14514 1584 aa23.8■■□□□ 1.4
LINC00240-203ENST00000606878 NBPF1Q3BBV0 1214 aa23.8■■□□□ 1.4
LINC00240-203ENST00000606878 DDX17Q92841 729 aaKnown RBP23.79■■□□□ 1.4
LINC00240-203ENST00000606878 PHF23Q9BUL5 403 aaPredicted RBP23.79■■□□□ 1.4
LINC00240-203ENST00000606878 KNDC1Q76NI1 1749 aa23.77■■□□□ 1.4
LINC00240-203ENST00000606878 DLC1Q96QB1 1528 aa23.77■■□□□ 1.4
LINC00240-203ENST00000606878 PHLPP1O60346 1717 aa23.76■■□□□ 1.39
LINC00240-203ENST00000606878 AHDC1Q5TGY3 1603 aaPredicted RBP23.75■■□□□ 1.39
LINC00240-203ENST00000606878 HIRIP3Q9BW71 556 aaPredicted RBP23.74■■□□□ 1.39
LINC00240-203ENST00000606878 MINK1Q8N4C8 1332 aaPredicted RBP23.74■■□□□ 1.39
LINC00240-203ENST00000606878 CDC42BPGQ6DT37 1551 aa23.74■■□□□ 1.39
LINC00240-203ENST00000606878 FOXO3O43524 673 aa23.73■■□□□ 1.39
LINC00240-203ENST00000606878 SPATA31A6Q5VVP1 1343 aa23.73■■□□□ 1.39
LINC00240-203ENST00000606878 NPHP3Q7Z494 1330 aa23.72■■□□□ 1.39
LINC00240-203ENST00000606878 MED1Q15648 1581 aaPredicted RBP23.72■■□□□ 1.39
LINC00240-203ENST00000606878 SOS2Q07890 1332 aaPredicted RBP23.71■■□□□ 1.39
LINC00240-203ENST00000606878 COL16A1Q07092 1604 aaPredicted RBP23.7■■□□□ 1.39
LINC00240-203ENST00000606878 TONSLQ96HA7 1378 aa23.7■■□□□ 1.38
LINC00240-203ENST00000606878 WASLO00401 505 aaPredicted RBP23.7■■□□□ 1.38
LINC00240-203ENST00000606878 PHF8Q9UPP1 1060 aa23.69■■□□□ 1.38
LINC00240-203ENST00000606878 NUTM2BA6NNL0 878 aaPredicted RBP23.67■■□□□ 1.38
LINC00240-203ENST00000606878 NUTM2EB1AL46 878 aaPredicted RBP23.67■■□□□ 1.38
LINC00240-203ENST00000606878 ILDR2Q71H61 639 aa23.67■■□□□ 1.38
LINC00240-203ENST00000606878 NUTM2AQ8IVF1 878 aaPredicted RBP23.67■■□□□ 1.38
LINC00240-203ENST00000606878 MEX3CQ5U5Q3 659 aaKnown RBP23.66■■□□□ 1.38
LINC00240-203ENST00000606878 KIAA1210Q9ULL0 1709 aa23.65■■□□□ 1.38
LINC00240-203ENST00000606878 XPCQ01831 940 aaPredicted RBP23.65■■□□□ 1.38
LINC00240-203ENST00000606878 NBPF8Q3BBV2 869 aa23.65■■□□□ 1.38
LINC00240-203ENST00000606878 EIF3AQ14152 1382 aaKnown RBP23.65■■□□□ 1.38
LINC00240-203ENST00000606878 KRT28Q7Z3Y7 464 aa23.64■■□□□ 1.37
LINC00240-203ENST00000606878 PSME1Q06323 249 aa23.63■■□□□ 1.37
LINC00240-203ENST00000606878 CDK19Q9BWU1 502 aa23.63■■□□□ 1.37
LINC00240-203ENST00000606878 ROCK2O75116 1388 aaKnown RBP23.63■■□□□ 1.37
LINC00240-203ENST00000606878 NHSL1Q5SYE7 1610 aa23.62■■□□□ 1.37
LINC00240-203ENST00000606878 CENPJQ9HC77 1338 aaPredicted RBP23.62■■□□□ 1.37
LINC00240-203ENST00000606878 PMFBP1Q8TBY8 1022 aa23.62■■□□□ 1.37
LINC00240-203ENST00000606878 ANKARQ7Z5J8 1434 aa23.61■■□□□ 1.37
LINC00240-203ENST00000606878 RGS17Q9UGC6 210 aaPredicted RBP23.61■■□□□ 1.37
LINC00240-203ENST00000606878 FMN2Q9NZ56 1722 aa23.6■■□□□ 1.37
LINC00240-203ENST00000606878 NUDT16Q96DE0 195 aaKnown RBP23.6■■□□□ 1.37
LINC00240-203ENST00000606878 PNPLA6Q8IY17 1366 aa23.6■■□□□ 1.37
LINC00240-203ENST00000606878 PRR36Q9H6K5 1346 aa23.58■■□□□ 1.36
LINC00240-203ENST00000606878 CLSPNQ9HAW4 1339 aa23.58■■□□□ 1.36
LINC00240-203ENST00000606878 NGDNQ8NEJ9 315 aaKnown RBP23.56■■□□□ 1.36
LINC00240-203ENST00000606878 CARD11Q9BXL7 1154 aa23.56■■□□□ 1.36
LINC00240-203ENST00000606878 ADGRB2O60241 1585 aa23.56■■□□□ 1.36
LINC00240-203ENST00000606878 CCDC61Q9Y6R9 512 aa23.55■■□□□ 1.36
LINC00240-203ENST00000606878 SPATA31A3Q5VYP0 1347 aa23.55■■□□□ 1.36
LINC00240-203ENST00000606878 SHPRHQ149N8 1683 aa23.54■■□□□ 1.36
LINC00240-203ENST00000606878 SRPK2P78362 688 aaKnown RBP23.54■■□□□ 1.36
LINC00240-203ENST00000606878 TIMELESSQ9UNS1 1208 aa23.54■■□□□ 1.36
LINC00240-203ENST00000606878 PXDNQ92626 1479 aa23.54■■□□□ 1.36
LINC00240-203ENST00000606878 ARHGEF28Q8N1W1 1705 aaKnown RBP23.53■■□□□ 1.36
LINC00240-203ENST00000606878 ADAMTS2O95450 1211 aa23.53■■□□□ 1.36
LINC00240-203ENST00000606878 ZNF772Q68DY9 489 aaPredicted RBP23.53■■□□□ 1.36
LINC00240-203ENST00000606878 GPRASP1Q5JY77 1395 aa23.52■■□□□ 1.36
LINC00240-203ENST00000606878 LRP6O75581 1613 aa23.52■■□□□ 1.36
LINC00240-203ENST00000606878 CCER1Q8TC90 406 aaPredicted RBP23.52■■□□□ 1.36
LINC00240-203ENST00000606878 TULP4Q9NRJ4 1543 aa23.51■■□□□ 1.35
LINC00240-203ENST00000606878 LMOD2Q6P5Q4 547 aa23.51■■□□□ 1.35
LINC00240-203ENST00000606878 POTEAQ6S8J7 498 aa23.51■■□□□ 1.35
LINC00240-203ENST00000606878 NGLY1Q96IV0 654 aa23.5■■□□□ 1.35
LINC00240-203ENST00000606878 C8orf37Q96NL8 207 aa23.5■■□□□ 1.35
LINC00240-203ENST00000606878 CABP2Q9NPB3 220 aa23.5■■□□□ 1.35
LINC00240-203ENST00000606878 KIF1AQ12756 1690 aa23.5■■□□□ 1.35
LINC00240-203ENST00000606878 TRPM1Q7Z4N2 1603 aa23.49■■□□□ 1.35
LINC00240-203ENST00000606878 EVC2Q86UK5 1308 aa23.49■■□□□ 1.35
LINC00240-203ENST00000606878 SBNO1A3KN83 1393 aa23.49■■□□□ 1.35
LINC00240-203ENST00000606878 RGPD8O14715 1765 aaPredicted RBP23.48■■□□□ 1.35
LINC00240-203ENST00000606878 PLEKHG3A1L390 1219 aa23.48■■□□□ 1.35
LINC00240-203ENST00000606878 SOCS7O14512 581 aa23.46■■□□□ 1.35
LINC00240-203ENST00000606878 USP32Q8NFA0 1604 aa23.45■■□□□ 1.34
LINC00240-203ENST00000606878 AFF2P51816 1311 aa23.45■■□□□ 1.34
LINC00240-203ENST00000606878 PAK3O75914 559 aaPredicted RBP23.45■■□□□ 1.34
LINC00240-203ENST00000606878 ACEP12821 1306 aa23.44■■□□□ 1.34
LINC00240-203ENST00000606878 HAP1P54257 671 aaPredicted RBP23.44■■□□□ 1.34
LINC00240-203ENST00000606878 ARHGEF10O15013 1369 aa23.43■■□□□ 1.34
LINC00240-203ENST00000606878 ATP7BP35670 1465 aa23.43■■□□□ 1.34
LINC00240-203ENST00000606878 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
LINC00240-203ENST00000606878 TNS3Q68CZ2 1445 aa23.42■■□□□ 1.34
LINC00240-203ENST00000606878 PLEKHG5O94827 1062 aa23.42■■□□□ 1.34
LINC00240-203ENST00000606878 CABP1Q9NZU7 370 aa23.42■■□□□ 1.34
LINC00240-203ENST00000606878 CABLES1Q8TDN4 633 aa23.41■■□□□ 1.34
LINC00240-203ENST00000606878 FNBP4Q8N3X1 1017 aaPredicted RBP23.4■■□□□ 1.34
LINC00240-203ENST00000606878 QTRT2Q9H974 415 aaKnown RBP23.4■■□□□ 1.34
LINC00240-203ENST00000606878 RXRBP28702 533 aa23.39■■□□□ 1.33
LINC00240-203ENST00000606878 POLR3AO14802 1390 aaPredicted RBP23.39■■□□□ 1.33
LINC00240-203ENST00000606878 SLC24A1O60721 1099 aa23.38■■□□□ 1.33
LINC00240-203ENST00000606878 USP21Q9UK80 565 aa23.38■■□□□ 1.33
LINC00240-203ENST00000606878 PPIP5K1Q6PFW1 1433 aa23.37■■□□□ 1.33
LINC00240-203ENST00000606878 COL22A1Q8NFW1 1626 aaPredicted RBP23.37■■□□□ 1.33
LINC00240-203ENST00000606878 QRICH2Q9H0J4 1663 aa23.35■■□□□ 1.33
LINC00240-203ENST00000606878 ST20-MTHFSA0A0A6YYL1 179 aa23.35■■□□□ 1.33
LINC00240-203ENST00000606878 SBNO2Q9Y2G9 1366 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms