RNA–Protein interactions for RNA: ENST00000606296.1

SATB1-218, Transcript of SATB homeobox 1, humanhuman

Gene SATB1, Length 4,200 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-218ENST00000606296 SYCP2Q9BX26 1530 aa9.18□□□□□ -0.94
SATB1-218ENST00000606296 VGFO15240 615 aaPredicted RBP9.18□□□□□ -0.94
SATB1-218ENST00000606296 PTMAP06454 111 aaKnown RBP9.18□□□□□ -0.94
SATB1-218ENST00000606296 CASC1Q6TDU7 716 aa9.18□□□□□ -0.94
SATB1-218ENST00000606296 SSH1Q8WYL5 1049 aa9.18□□□□□ -0.94
SATB1-218ENST00000606296 TMEM57Q8N5G2 664 aa9.17□□□□□ -0.94
SATB1-218ENST00000606296 COL17A1Q9UMD9 1497 aaPredicted RBP9.17□□□□□ -0.94
SATB1-218ENST00000606296 DDX49Q9Y6V7 483 aaKnown RBP9.17□□□□□ -0.94
SATB1-218ENST00000606296 ITSN2Q9NZM3 1697 aa9.17□□□□□ -0.94
SATB1-218ENST00000606296 PBRM1Q86U86 1689 aa9.17□□□□□ -0.94
SATB1-218ENST00000606296 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
SATB1-218ENST00000606296 PRKAR2BP31323 418 aa9.16□□□□□ -0.94
SATB1-218ENST00000606296 ARHGEF12Q9NZN5 1544 aa9.16□□□□□ -0.94
SATB1-218ENST00000606296 MCM4P33991 863 aa9.16□□□□□ -0.94
SATB1-218ENST00000606296 STAC3Q96MF2 364 aa9.16□□□□□ -0.94
SATB1-218ENST00000606296 RSPH6AQ9H0K4 717 aa9.16□□□□□ -0.94
SATB1-218ENST00000606296 ADGRL2O95490 1459 aa9.16□□□□□ -0.94
SATB1-218ENST00000606296 TARBP1Q13395 1621 aaKnown RBP9.16□□□□□ -0.94
SATB1-218ENST00000606296 ATF7IPQ6VMQ6 1270 aa9.16□□□□□ -0.94
SATB1-218ENST00000606296 WDR63Q8IWG1 891 aa9.16□□□□□ -0.94
SATB1-218ENST00000606296 DDX11L8A8MPP1 907 aa9.16□□□□□ -0.94
SATB1-218ENST00000606296 CHMP4BQ9H444 224 aaKnown RBP9.16□□□□□ -0.94
SATB1-218ENST00000606296 SCAF11Q99590 1463 aaKnown RBP9.15□□□□□ -0.94
SATB1-218ENST00000606296 TMPOP42166 694 aaKnown RBP9.15□□□□□ -0.94
SATB1-218ENST00000606296 DNTTIP2Q5QJE6 756 aaKnown RBP9.15□□□□□ -0.94
SATB1-218ENST00000606296 PRAM1Q96QH2 718 aa9.15□□□□□ -0.94
SATB1-218ENST00000606296 TRIM27P14373 513 aa9.15□□□□□ -0.95
SATB1-218ENST00000606296 MBD5Q9P267 1494 aa9.15□□□□□ -0.95
SATB1-218ENST00000606296 MSNP26038 577 aaKnown RBP9.14□□□□□ -0.95
SATB1-218ENST00000606296 NECTIN2Q92692 538 aa9.14□□□□□ -0.95
SATB1-218ENST00000606296 RAPGEF3O95398 923 aa9.14□□□□□ -0.95
SATB1-218ENST00000606296 PANK2Q9BZ23 570 aa9.14□□□□□ -0.95
SATB1-218ENST00000606296 CABP1Q9NZU7 370 aa9.14□□□□□ -0.95
SATB1-218ENST00000606296 CALD1Q05682 793 aaKnown RBP9.13□□□□□ -0.95
SATB1-218ENST00000606296 TRAPPC8Q9Y2L5 1435 aa9.13□□□□□ -0.95
SATB1-218ENST00000606296 MAGI2Q86UL8 1455 aa9.13□□□□□ -0.95
SATB1-218ENST00000606296 BLMP54132 1417 aaPredicted RBP9.13□□□□□ -0.95
SATB1-218ENST00000606296 TBC1D32Q96NH3 1257 aa9.13□□□□□ -0.95
SATB1-218ENST00000606296 KIF16BQ96L93 1317 aa9.13□□□□□ -0.95
SATB1-218ENST00000606296 ASXL1Q8IXJ9 1541 aa9.13□□□□□ -0.95
SATB1-218ENST00000606296 FAM43AQ8N2R8 423 aa9.13□□□□□ -0.95
SATB1-218ENST00000606296 TRIM6-TRIM34B2RNG4 842 aa9.12□□□□□ -0.95
SATB1-218ENST00000606296 GPRASP1Q5JY77 1395 aa9.12□□□□□ -0.95
SATB1-218ENST00000606296 ZMYM4Q5VZL5 1548 aa9.12□□□□□ -0.95
SATB1-218ENST00000606296 NOS1P29475 1434 aa9.12□□□□□ -0.95
SATB1-218ENST00000606296 MCTP1Q6DN14 999 aa9.11□□□□□ -0.95
SATB1-218ENST00000606296 DCTN1Q14203 1278 aa9.11□□□□□ -0.95
SATB1-218ENST00000606296 EIF4G3O43432 1585 aaKnown RBP9.11□□□□□ -0.95
SATB1-218ENST00000606296 CHD1LQ86WJ1 897 aa9.11□□□□□ -0.95
SATB1-218ENST00000606296 RTF1Q92541 710 aaKnown RBP9.11□□□□□ -0.95
SATB1-218ENST00000606296 LTV1Q96GA3 475 aaPredicted RBP9.1□□□□□ -0.95
SATB1-218ENST00000606296 HSP90AA2PQ14568 343 aaPredicted RBP9.1□□□□□ -0.95
SATB1-218ENST00000606296 RILPL2Q969X0 211 aa9.1□□□□□ -0.95
SATB1-218ENST00000606296 SHANK2Q9UPX8 1470 aa9.1□□□□□ -0.95
SATB1-218ENST00000606296 MRE11P49959 708 aa9.1□□□□□ -0.95
SATB1-218ENST00000606296 AAMPQ13685 434 aa9.1□□□□□ -0.95
SATB1-218ENST00000606296 PLA2R1Q13018 1463 aa9.09□□□□□ -0.95
SATB1-218ENST00000606296 OS9Q13438 667 aaPredicted RBP9.09□□□□□ -0.95
SATB1-218ENST00000606296 RRS1Q15050 365 aaKnown RBP9.09□□□□□ -0.95
SATB1-218ENST00000606296 VSIG10Q8N0Z9 540 aa9.09□□□□□ -0.95
SATB1-218ENST00000606296 TWISTNBQ3B726 338 aaPredicted RBP9.09□□□□□ -0.95
SATB1-218ENST00000606296 COG3Q96JB2 828 aa9.09□□□□□ -0.95
SATB1-218ENST00000606296 RBM42Q9BTD8 480 aaKnown RBP9.09□□□□□ -0.95
SATB1-218ENST00000606296 CDK19Q9BWU1 502 aa9.09□□□□□ -0.95
SATB1-218ENST00000606296 GRPEL1Q9HAV7 217 aa9.09□□□□□ -0.95
SATB1-218ENST00000606296 XRCC6P12956 609 aaKnown RBP eCLIP9.09□□□□□ -0.95
SATB1-218ENST00000606296 CEP170Q5SW79 1584 aa9.09□□□□□ -0.96
SATB1-218ENST00000606296 CAVIN1Q6NZI2 390 aaKnown RBP9.08□□□□□ -0.96
SATB1-218ENST00000606296 WAPLQ7Z5K2 1190 aa9.08□□□□□ -0.96
SATB1-218ENST00000606296 TAOK2Q9UL54 1235 aa9.08□□□□□ -0.96
SATB1-218ENST00000606296 ZNF521Q96K83 1311 aa9.08□□□□□ -0.96
SATB1-218ENST00000606296 NINLQ9Y2I6 1382 aa9.08□□□□□ -0.96
SATB1-218ENST00000606296 ABCC10Q5T3U5 1492 aa9.08□□□□□ -0.96
SATB1-218ENST00000606296 LMOD2Q6P5Q4 547 aa9.08□□□□□ -0.96
SATB1-218ENST00000606296 MPNDQ8N594 471 aa9.08□□□□□ -0.96
SATB1-218ENST00000606296 ADGBQ8N7X0 1667 aa9.08□□□□□ -0.96
SATB1-218ENST00000606296 ST18O60284 1047 aa9.08□□□□□ -0.96
SATB1-218ENST00000606296 GNAI1P63096 354 aa9.08□□□□□ -0.96
SATB1-218ENST00000606296 RNF214Q8ND24 703 aa9.08□□□□□ -0.96
SATB1-218ENST00000606296 PIK3C2GO75747 1445 aa9.08□□□□□ -0.96
SATB1-218ENST00000606296 CFAP65Q6ZU64 1925 aaKnown RBP9.07□□□□□ -0.96
SATB1-218ENST00000606296 TNPO1Q92973 898 aaKnown RBP9.07□□□□□ -0.96
SATB1-218ENST00000606296 API5Q9BZZ5 524 aaKnown RBP9.07□□□□□ -0.96
SATB1-218ENST00000606296 SMARCA5O60264 1052 aaPredicted RBP9.07□□□□□ -0.96
SATB1-218ENST00000606296 CDC45O75419 566 aa9.07□□□□□ -0.96
SATB1-218ENST00000606296 EMILIN1Q9Y6C2 1016 aa9.07□□□□□ -0.96
SATB1-218ENST00000606296 NUP160Q12769 1436 aa9.06□□□□□ -0.96
SATB1-218ENST00000606296 KCNJ4P48050 445 aa9.06□□□□□ -0.96
SATB1-218ENST00000606296 NASPP49321 788 aaPredicted RBP9.06□□□□□ -0.96
SATB1-218ENST00000606296 IDI1Q13907 227 aa9.06□□□□□ -0.96
SATB1-218ENST00000606296 C14orf93Q9H972 538 aaKnown RBP9.06□□□□□ -0.96
SATB1-218ENST00000606296 MIS18AQ9NYP9 233 aa9.06□□□□□ -0.96
SATB1-218ENST00000606296 FAM83GA6ND36 823 aa9.06□□□□□ -0.96
SATB1-218ENST00000606296 SSFA2P28290 1259 aa9.06□□□□□ -0.96
SATB1-218ENST00000606296 LMOD3Q0VAK6 560 aa9.06□□□□□ -0.96
SATB1-218ENST00000606296 STK31Q9BXU1 1019 aa9.06□□□□□ -0.96
SATB1-218ENST00000606296 PRPF40AO75400 957 aaKnown RBP9.06□□□□□ -0.96
SATB1-218ENST00000606296 MCCP23508 829 aa9.06□□□□□ -0.96
SATB1-218ENST00000606296 SKOR2Q2VWA4 1001 aaPredicted RBP9.06□□□□□ -0.96
SATB1-218ENST00000606296 TXNDC2Q86VQ3 553 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms