RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 SIRT1Q96EB6 747 aa27.88■■■□□ 2.05
SRSF4-206ENST00000605204 CFAP70Q5T0N1 1121 aa27.86■■■□□ 2.05
SRSF4-206ENST00000605204 TMEM132EQ6IEE7 984 aa27.86■■■□□ 2.05
SRSF4-206ENST00000605204 KDM2AQ9Y2K7 1162 aa27.85■■■□□ 2.05
SRSF4-206ENST00000605204 STK26Q9P289 416 aa27.84■■■□□ 2.05
SRSF4-206ENST00000605204 MEX3CQ5U5Q3 659 aaKnown RBP27.83■■■□□ 2.05
SRSF4-206ENST00000605204 CDC42BPGQ6DT37 1551 aa27.82■■■□□ 2.04
SRSF4-206ENST00000605204 ADGRB1O14514 1584 aa27.81■■■□□ 2.04
SRSF4-206ENST00000605204 DLC1Q96QB1 1528 aa27.81■■■□□ 2.04
SRSF4-206ENST00000605204 DDX17Q92841 729 aaKnown RBP27.77■■■□□ 2.04
SRSF4-206ENST00000605204 C1orf167Q5SNV9 1468 aa27.76■■■□□ 2.03
SRSF4-206ENST00000605204 PNPLA6Q8IY17 1366 aa27.76■■■□□ 2.03
SRSF4-206ENST00000605204 NUTM2BA6NNL0 878 aaPredicted RBP27.75■■■□□ 2.03
SRSF4-206ENST00000605204 NUTM2EB1AL46 878 aaPredicted RBP27.75■■■□□ 2.03
SRSF4-206ENST00000605204 NUTM2AQ8IVF1 878 aaPredicted RBP27.75■■■□□ 2.03
SRSF4-206ENST00000605204 ZNF772Q68DY9 489 aaPredicted RBP27.73■■■□□ 2.03
SRSF4-206ENST00000605204 WAPLQ7Z5K2 1190 aa27.73■■■□□ 2.03
SRSF4-206ENST00000605204 PLEKHH1Q9ULM0 1364 aa27.71■■■□□ 2.03
SRSF4-206ENST00000605204 KIAA1210Q9ULL0 1709 aa27.71■■■□□ 2.03
SRSF4-206ENST00000605204 CDK12Q9NYV4 1490 aaPredicted RBP27.7■■■□□ 2.03
SRSF4-206ENST00000605204 PRAM1Q96QH2 718 aa27.7■■■□□ 2.02
SRSF4-206ENST00000605204 AFF2P51816 1311 aa27.7■■■□□ 2.02
SRSF4-206ENST00000605204 L3MBTL2Q969R5 705 aa27.68■■■□□ 2.02
SRSF4-206ENST00000605204 POGKQ9P215 609 aa27.68■■■□□ 2.02
SRSF4-206ENST00000605204 RGS12O14924 1447 aa27.68■■■□□ 2.02
SRSF4-206ENST00000605204 SIN3AQ96ST3 1273 aa27.67■■■□□ 2.02
SRSF4-206ENST00000605204 TRAK1Q9UPV9 953 aa27.66■■■□□ 2.02
SRSF4-206ENST00000605204 NEUROD1Q13562 356 aa27.65■■■□□ 2.02
SRSF4-206ENST00000605204 UPF1Q92900 1129 aaKnown RBP eCLIP27.64■■■□□ 2.02
SRSF4-206ENST00000605204 COL22A1Q8NFW1 1626 aaPredicted RBP27.63■■■□□ 2.01
SRSF4-206ENST00000605204 ADGRB2O60241 1585 aa27.63■■■□□ 2.01
SRSF4-206ENST00000605204 EIF3AQ14152 1382 aaKnown RBP27.63■■■□□ 2.01
SRSF4-206ENST00000605204 LRRC59Q96AG4 307 aaKnown RBP27.61■■■□□ 2.01
SRSF4-206ENST00000605204 RXRBP28702 533 aa27.6■■■□□ 2.01
SRSF4-206ENST00000605204 C8orf37Q96NL8 207 aa27.6■■■□□ 2.01
SRSF4-206ENST00000605204 ORAI2Q96SN7 254 aa27.6■■■□□ 2.01
SRSF4-206ENST00000605204 FMN2Q9NZ56 1722 aa27.59■■■□□ 2.01
SRSF4-206ENST00000605204 NPHP3Q7Z494 1330 aa27.58■■■□□ 2.01
SRSF4-206ENST00000605204 ANKARQ7Z5J8 1434 aa27.58■■■□□ 2.01
SRSF4-206ENST00000605204 ESCO1Q5FWF5 840 aa27.58■■■□□ 2.01
SRSF4-206ENST00000605204 TONSLQ96HA7 1378 aa27.57■■■□□ 2
SRSF4-206ENST00000605204 SAFB2Q14151 953 aaKnown RBP eCLIP27.57■■■□□ 24e-8■□□□□ 11.1
SRSF4-206ENST00000605204 SOS2Q07890 1332 aaPredicted RBP27.56■■■□□ 2
SRSF4-206ENST00000605204 PXDNQ92626 1479 aa27.55■■■□□ 2
SRSF4-206ENST00000605204 ARHGEF28Q8N1W1 1705 aaKnown RBP27.55■■■□□ 2
SRSF4-206ENST00000605204 KIF1AQ12756 1690 aa27.53■■■□□ 2
SRSF4-206ENST00000605204 ADAMTS2O95450 1211 aa27.53■■■□□ 2
SRSF4-206ENST00000605204 MARF1Q9Y4F3 1742 aaKnown RBP27.52■■■□□ 2
SRSF4-206ENST00000605204 NBPF1Q3BBV0 1214 aa27.52■■■□□ 2
SRSF4-206ENST00000605204 CLSPNQ9HAW4 1339 aa27.51■■□□□ 1.99
SRSF4-206ENST00000605204 MINK1Q8N4C8 1332 aaPredicted RBP27.5■■□□□ 1.99
SRSF4-206ENST00000605204 NUTM2FA1L443 756 aa27.49■■□□□ 1.99
SRSF4-206ENST00000605204 PCGF6Q9BYE7 350 aa27.49■■□□□ 1.99
SRSF4-206ENST00000605204 TRPM1Q7Z4N2 1603 aa27.49■■□□□ 1.99
SRSF4-206ENST00000605204 WASLO00401 505 aaPredicted RBP27.48■■□□□ 1.99
SRSF4-206ENST00000605204 TULP4Q9NRJ4 1543 aa27.48■■□□□ 1.99
SRSF4-206ENST00000605204 ROCK2O75116 1388 aaKnown RBP27.48■■□□□ 1.99
SRSF4-206ENST00000605204 EP400Q96L91 3159 aa27.47■■□□□ 1.99
SRSF4-206ENST00000605204 HIRIP3Q9BW71 556 aaPredicted RBP27.47■■□□□ 1.99
SRSF4-206ENST00000605204 FOXO3O43524 673 aa27.46■■□□□ 1.99
SRSF4-206ENST00000605204 RBM6P78332 1123 aaKnown RBP27.46■■□□□ 1.99
SRSF4-206ENST00000605204 QTRT2Q9H974 415 aaKnown RBP27.46■■□□□ 1.99
SRSF4-206ENST00000605204 PHF8Q9UPP1 1060 aa27.46■■□□□ 1.99
SRSF4-206ENST00000605204 CENPJQ9HC77 1338 aaPredicted RBP27.45■■□□□ 1.98
SRSF4-206ENST00000605204 GPRASP1Q5JY77 1395 aa27.45■■□□□ 1.98
SRSF4-206ENST00000605204 ATRNO75882 1429 aa27.43■■□□□ 1.98
SRSF4-206ENST00000605204 NGLY1Q96IV0 654 aa27.43■■□□□ 1.98
SRSF4-206ENST00000605204 XPCQ01831 940 aaPredicted RBP27.4■■□□□ 1.98
SRSF4-206ENST00000605204 PSME1Q06323 249 aa27.4■■□□□ 1.98
SRSF4-206ENST00000605204 USP32Q8NFA0 1604 aa27.4■■□□□ 1.98
SRSF4-206ENST00000605204 RALGAPBQ86X10 1494 aa27.4■■□□□ 1.98
SRSF4-206ENST00000605204 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.39■■□□□ 1.98
SRSF4-206ENST00000605204 NBPF8Q3BBV2 869 aa27.38■■□□□ 1.97
SRSF4-206ENST00000605204 TIMELESSQ9UNS1 1208 aa27.38■■□□□ 1.97
SRSF4-206ENST00000605204 RGPD8O14715 1765 aaPredicted RBP27.38■■□□□ 1.97
SRSF4-206ENST00000605204 USP21Q9UK80 565 aa27.37■■□□□ 1.97
SRSF4-206ENST00000605204 ATP7BP35670 1465 aa27.37■■□□□ 1.97
SRSF4-206ENST00000605204 BCL9LQ86UU0 1499 aa27.36■■□□□ 1.97
SRSF4-206ENST00000605204 ABCA3Q99758 1704 aa27.36■■□□□ 1.97
SRSF4-206ENST00000605204 SBNO1A3KN83 1393 aa27.36■■□□□ 1.97
SRSF4-206ENST00000605204 PRR36Q9H6K5 1346 aa27.36■■□□□ 1.97
SRSF4-206ENST00000605204 SRCAPQ6ZRS2 3230 aa27.36■■□□□ 1.97
SRSF4-206ENST00000605204 KRT28Q7Z3Y7 464 aa27.35■■□□□ 1.97
SRSF4-206ENST00000605204 FNBP4Q8N3X1 1017 aaPredicted RBP27.35■■□□□ 1.97
SRSF4-206ENST00000605204 CDK19Q9BWU1 502 aa27.35■■□□□ 1.97
SRSF4-206ENST00000605204 SPATA31A3Q5VYP0 1347 aa27.34■■□□□ 1.97
SRSF4-206ENST00000605204 ITSN1Q15811 1721 aa27.33■■□□□ 1.97
SRSF4-206ENST00000605204 TNS3Q68CZ2 1445 aa27.33■■□□□ 1.97
SRSF4-206ENST00000605204 NUDT16Q96DE0 195 aaKnown RBP27.33■■□□□ 1.97
SRSF4-206ENST00000605204 ATAD2Q6PL18 1390 aa27.33■■□□□ 1.96
SRSF4-206ENST00000605204 CARD11Q9BXL7 1154 aa27.32■■□□□ 1.96
SRSF4-206ENST00000605204 TRPC5Q9UL62 973 aaPredicted RBP27.32■■□□□ 1.96
SRSF4-206ENST00000605204 CCDC61Q9Y6R9 512 aa27.32■■□□□ 1.96
SRSF4-206ENST00000605204 ARHGEF10O15013 1369 aa27.32■■□□□ 1.96
SRSF4-206ENST00000605204 GLI3P10071 1580 aa27.32■■□□□ 1.96
SRSF4-206ENST00000605204 QRICH2Q9H0J4 1663 aa27.32■■□□□ 1.96
SRSF4-206ENST00000605204 PMFBP1Q8TBY8 1022 aa27.31■■□□□ 1.96
SRSF4-206ENST00000605204 SBNO2Q9Y2G9 1366 aa27.3■■□□□ 1.96
SRSF4-206ENST00000605204 EVC2Q86UK5 1308 aa27.29■■□□□ 1.96
SRSF4-206ENST00000605204 PLCH1Q4KWH8 1693 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms