RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 EP400Q96L91 3159 aa25.42■■□□□ 1.66
CCDC12-210ENST00000604181 COL22A1Q8NFW1 1626 aaPredicted RBP25.4■■□□□ 1.66
CCDC12-210ENST00000604181 CDC42BPGQ6DT37 1551 aa25.39■■□□□ 1.66
CCDC12-210ENST00000604181 USP21Q9UK80 565 aa25.39■■□□□ 1.66
CCDC12-210ENST00000604181 FNBP4Q8N3X1 1017 aaPredicted RBP25.38■■□□□ 1.65
CCDC12-210ENST00000604181 MYOM2P54296 1465 aa25.38■■□□□ 1.65
CCDC12-210ENST00000604181 PXDNQ92626 1479 aa25.38■■□□□ 1.65
CCDC12-210ENST00000604181 XPCQ01831 940 aaPredicted RBP25.37■■□□□ 1.65
CCDC12-210ENST00000604181 ESCO1Q5FWF5 840 aa25.37■■□□□ 1.65
CCDC12-210ENST00000604181 WAPLQ7Z5K2 1190 aa25.37■■□□□ 1.65
CCDC12-210ENST00000604181 ATRNO75882 1429 aa25.36■■□□□ 1.65
CCDC12-210ENST00000604181 STK26Q9P289 416 aa25.35■■□□□ 1.65
CCDC12-210ENST00000604181 SPATA31E1Q6ZUB1 1445 aa25.35■■□□□ 1.65
CCDC12-210ENST00000604181 PLEKHH1Q9ULM0 1364 aa25.34■■□□□ 1.65
CCDC12-210ENST00000604181 NUTM2FA1L443 756 aa25.34■■□□□ 1.65
CCDC12-210ENST00000604181 FOXO3O43524 673 aa25.34■■□□□ 1.65
CCDC12-210ENST00000604181 RGL3Q3MIN7 710 aa25.34■■□□□ 1.65
CCDC12-210ENST00000604181 TRPC5Q9UL62 973 aaPredicted RBP25.34■■□□□ 1.65
CCDC12-210ENST00000604181 TECPR2O15040 1411 aa25.33■■□□□ 1.65
CCDC12-210ENST00000604181 IFT172Q9UG01 1749 aa25.33■■□□□ 1.65
CCDC12-210ENST00000604181 NPHP3Q7Z494 1330 aa25.33■■□□□ 1.64
CCDC12-210ENST00000604181 TMEM132EQ6IEE7 984 aa25.32■■□□□ 1.64
CCDC12-210ENST00000604181 BCL9LQ86UU0 1499 aa25.31■■□□□ 1.64
CCDC12-210ENST00000604181 LRPPRCP42704 1394 aaKnown RBP25.31■■□□□ 1.64
CCDC12-210ENST00000604181 CCDC144AA2RUR9 1427 aa25.3■■□□□ 1.64
CCDC12-210ENST00000604181 ATAD2Q6PL18 1390 aa25.29■■□□□ 1.64
CCDC12-210ENST00000604181 MARF1Q9Y4F3 1742 aaKnown RBP25.29■■□□□ 1.64
CCDC12-210ENST00000604181 KNDC1Q76NI1 1749 aa25.27■■□□□ 1.64
CCDC12-210ENST00000604181 ABCC11Q96J66 1382 aa25.27■■□□□ 1.64
CCDC12-210ENST00000604181 MPHOSPH9Q99550 1183 aa25.26■■□□□ 1.63
CCDC12-210ENST00000604181 PIK3C2GO75747 1445 aa25.26■■□□□ 1.63
CCDC12-210ENST00000604181 ANKRD30BQ9BXX2 1392 aa25.25■■□□□ 1.63
CCDC12-210ENST00000604181 FMN2Q9NZ56 1722 aa25.25■■□□□ 1.63
CCDC12-210ENST00000604181 YTHDC2Q9H6S0 1430 aaKnown RBP25.22■■□□□ 1.63
CCDC12-210ENST00000604181 SPATA31A3Q5VYP0 1347 aa25.2■■□□□ 1.62
CCDC12-210ENST00000604181 GJD4Q96KN9 370 aaPredicted RBP25.19■■□□□ 1.62
CCDC12-210ENST00000604181 RGPD8O14715 1765 aaPredicted RBP25.18■■□□□ 1.62
CCDC12-210ENST00000604181 GLI3P10071 1580 aa25.18■■□□□ 1.62
CCDC12-210ENST00000604181 SLIT2O94813 1529 aa25.17■■□□□ 1.62
CCDC12-210ENST00000604181 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.17■■□□□ 1.62
CCDC12-210ENST00000604181 KIF1AQ12756 1690 aa25.16■■□□□ 1.62
CCDC12-210ENST00000604181 KRT28Q7Z3Y7 464 aa25.15■■□□□ 1.62
CCDC12-210ENST00000604181 RALGAPBQ86X10 1494 aa25.15■■□□□ 1.62
CCDC12-210ENST00000604181 UNC5CLQ8IV45 518 aa25.14■■□□□ 1.62
CCDC12-210ENST00000604181 C14orf93Q9H972 538 aaKnown RBP25.14■■□□□ 1.62
CCDC12-210ENST00000604181 USP32Q8NFA0 1604 aa25.14■■□□□ 1.61
CCDC12-210ENST00000604181 NRXN1Q9ULB1 1477 aa25.14■■□□□ 1.61
CCDC12-210ENST00000604181 CFAP70Q5T0N1 1121 aa25.13■■□□□ 1.61
CCDC12-210ENST00000604181 CABLES1Q8TDN4 633 aa25.12■■□□□ 1.61
CCDC12-210ENST00000604181 SIRT1Q96EB6 747 aa25.11■■□□□ 1.61
CCDC12-210ENST00000604181 SAFB2Q14151 953 aaKnown RBP eCLIP25.1■■□□□ 1.61
CCDC12-210ENST00000604181 PHF8Q9UPP1 1060 aa25.1■■□□□ 1.61
CCDC12-210ENST00000604181 TNS3Q68CZ2 1445 aa25.1■■□□□ 1.61
CCDC12-210ENST00000604181 BRWD3Q6RI45 1802 aa25.09■■□□□ 1.61
CCDC12-210ENST00000604181 PLEKHG5O94827 1062 aa25.09■■□□□ 1.61
CCDC12-210ENST00000604181 PRAM1Q96QH2 718 aa25.07■■□□□ 1.6
CCDC12-210ENST00000604181 ABCA3Q99758 1704 aa25.06■■□□□ 1.6
CCDC12-210ENST00000604181 ZRANB1Q9UGI0 708 aa25.06■■□□□ 1.6
CCDC12-210ENST00000604181 DHX57Q6P158 1386 aaKnown RBP25.05■■□□□ 1.6
CCDC12-210ENST00000604181 CCDC125Q86Z20 511 aa25.05■■□□□ 1.6
CCDC12-210ENST00000604181 PLCH1Q4KWH8 1693 aa25.04■■□□□ 1.6
CCDC12-210ENST00000604181 SBNO1A3KN83 1393 aa25.03■■□□□ 1.6
CCDC12-210ENST00000604181 PMFBP1Q8TBY8 1022 aa25.02■■□□□ 1.6
CCDC12-210ENST00000604181 VPS72Q15906 364 aa25.01■■□□□ 1.59
CCDC12-210ENST00000604181 DEFB132Q7Z7B7 95 aa25.01■■□□□ 1.59
CCDC12-210ENST00000604181 SEPT12Q8IYM1 358 aa25.01■■□□□ 1.59
CCDC12-210ENST00000604181 BLMP54132 1417 aaPredicted RBP25.01■■□□□ 1.59
CCDC12-210ENST00000604181 HAP1P54257 671 aaPredicted RBP25■■□□□ 1.59
CCDC12-210ENST00000604181 PSME1Q06323 249 aa25■■□□□ 1.59
CCDC12-210ENST00000604181 LMOD2Q6P5Q4 547 aa25■■□□□ 1.59
CCDC12-210ENST00000604181 DLC1Q96QB1 1528 aa25■■□□□ 1.59
CCDC12-210ENST00000604181 ADGRB1O14514 1584 aa25■■□□□ 1.59
CCDC12-210ENST00000604181 NWD2Q9ULI1 1742 aa24.99■■□□□ 1.59
CCDC12-210ENST00000604181 FAM83GA6ND36 823 aa24.98■■□□□ 1.59
CCDC12-210ENST00000604181 ADGRB2O60241 1585 aa24.97■■□□□ 1.59
CCDC12-210ENST00000604181 TRPM3Q9HCF6 1732 aaPredicted RBP24.97■■□□□ 1.59
CCDC12-210ENST00000604181 ANKARQ7Z5J8 1434 aa24.96■■□□□ 1.59
CCDC12-210ENST00000604181 ARHGEF10O15013 1369 aa24.96■■□□□ 1.59
CCDC12-210ENST00000604181 PRR36Q9H6K5 1346 aa24.96■■□□□ 1.59
CCDC12-210ENST00000604181 HIRIP3Q9BW71 556 aaPredicted RBP24.96■■□□□ 1.59
CCDC12-210ENST00000604181 POGKQ9P215 609 aa24.96■■□□□ 1.59
CCDC12-210ENST00000604181 ONECUT3O60422 494 aaPredicted RBP24.95■■□□□ 1.58
CCDC12-210ENST00000604181 RAB3GAP2Q9H2M9 1393 aa24.94■■□□□ 1.58
CCDC12-210ENST00000604181 TRAK1Q9UPV9 953 aa24.94■■□□□ 1.58
CCDC12-210ENST00000604181 CCDC9Q9Y3X0 531 aaKnown RBP24.94■■□□□ 1.58
CCDC12-210ENST00000604181 NRAPQ86VF7 1730 aa24.94■■□□□ 1.58
CCDC12-210ENST00000604181 MINK1Q8N4C8 1332 aaPredicted RBP24.92■■□□□ 1.58
CCDC12-210ENST00000604181 ALS2Q96Q42 1657 aa24.92■■□□□ 1.58
CCDC12-210ENST00000604181 KRT27Q7Z3Y8 459 aa24.9■■□□□ 1.58
CCDC12-210ENST00000604181 KDM2AQ9Y2K7 1162 aa24.88■■□□□ 1.57
CCDC12-210ENST00000604181 ACIN1Q9UKV3 1341 aaKnown RBP24.87■■□□□ 1.57
CCDC12-210ENST00000604181 TULP4Q9NRJ4 1543 aa24.87■■□□□ 1.57
CCDC12-210ENST00000604181 FAM98CQ17RN3 349 aaKnown RBP24.87■■□□□ 1.57
CCDC12-210ENST00000604181 BTG4Q9NY30 223 aa24.87■■□□□ 1.57
CCDC12-210ENST00000604181 CRYBG1Q9Y4K1 1723 aa24.86■■□□□ 1.57
CCDC12-210ENST00000604181 WASLO00401 505 aaPredicted RBP24.84■■□□□ 1.57
CCDC12-210ENST00000604181 SF3B2Q13435 895 aaKnown RBP24.84■■□□□ 1.57
CCDC12-210ENST00000604181 DCAF11Q8TEB1 546 aa24.84■■□□□ 1.57
CCDC12-210ENST00000604181 GPRASP1Q5JY77 1395 aa24.83■■□□□ 1.57
CCDC12-210ENST00000604181 COL14A1Q05707 1796 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms