RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 ORAI2Q96SN7 254 aa24.05■■□□□ 1.44
TUBE1-206ENST00000603722 SHPRHQ149N8 1683 aa24.05■■□□□ 1.44
TUBE1-206ENST00000603722 CDC42BPGQ6DT37 1551 aa24.04■■□□□ 1.44
TUBE1-206ENST00000603722 POTEAQ6S8J7 498 aa24.04■■□□□ 1.44
TUBE1-206ENST00000603722 LRRC59Q96AG4 307 aaKnown RBP24.02■■□□□ 1.44
TUBE1-206ENST00000603722 NUTM2BA6NNL0 878 aaPredicted RBP24.01■■□□□ 1.43
TUBE1-206ENST00000603722 NUTM2EB1AL46 878 aaPredicted RBP24.01■■□□□ 1.43
TUBE1-206ENST00000603722 NUTM2AQ8IVF1 878 aaPredicted RBP24.01■■□□□ 1.43
TUBE1-206ENST00000603722 KNDC1Q76NI1 1749 aa24■■□□□ 1.43
TUBE1-206ENST00000603722 DHX57Q6P158 1386 aaKnown RBP23.99■■□□□ 1.43
TUBE1-206ENST00000603722 LAMC1P11047 1609 aa23.99■■□□□ 1.43
TUBE1-206ENST00000603722 ESCO1Q5FWF5 840 aa23.98■■□□□ 1.43
TUBE1-206ENST00000603722 PNPLA6Q8IY17 1366 aa23.98■■□□□ 1.43
TUBE1-206ENST00000603722 NUTM2FA1L443 756 aa23.97■■□□□ 1.43
TUBE1-206ENST00000603722 KDM2AQ9Y2K7 1162 aa23.97■■□□□ 1.43
TUBE1-206ENST00000603722 SOS2Q07890 1332 aaPredicted RBP23.96■■□□□ 1.43
TUBE1-206ENST00000603722 DCAF11Q8TEB1 546 aa23.96■■□□□ 1.43
TUBE1-206ENST00000603722 SIRT1Q96EB6 747 aa23.95■■□□□ 1.42
TUBE1-206ENST00000603722 PRAM1Q96QH2 718 aa23.93■■□□□ 1.42
TUBE1-206ENST00000603722 SAFB2Q14151 953 aaKnown RBP eCLIP23.92■■□□□ 1.42
TUBE1-206ENST00000603722 ADGRB1O14514 1584 aa23.91■■□□□ 1.42
TUBE1-206ENST00000603722 NPHP3Q7Z494 1330 aa23.91■■□□□ 1.42
TUBE1-206ENST00000603722 ZNF772Q68DY9 489 aaPredicted RBP23.91■■□□□ 1.42
TUBE1-206ENST00000603722 DLC1Q96QB1 1528 aa23.89■■□□□ 1.41
TUBE1-206ENST00000603722 FOXO3O43524 673 aa23.88■■□□□ 1.41
TUBE1-206ENST00000603722 XPCQ01831 940 aaPredicted RBP23.88■■□□□ 1.41
TUBE1-206ENST00000603722 POGKQ9P215 609 aa23.88■■□□□ 1.41
TUBE1-206ENST00000603722 PXDNQ92626 1479 aa23.87■■□□□ 1.41
TUBE1-206ENST00000603722 STAC3Q96MF2 364 aa23.87■■□□□ 1.41
TUBE1-206ENST00000603722 C8orf37Q96NL8 207 aa23.87■■□□□ 1.41
TUBE1-206ENST00000603722 TRAK1Q9UPV9 953 aa23.87■■□□□ 1.41
TUBE1-206ENST00000603722 AFF2P51816 1311 aa23.86■■□□□ 1.41
TUBE1-206ENST00000603722 FMN2Q9NZ56 1722 aa23.86■■□□□ 1.41
TUBE1-206ENST00000603722 ADAMTS2O95450 1211 aa23.85■■□□□ 1.41
TUBE1-206ENST00000603722 HIRIP3Q9BW71 556 aaPredicted RBP23.8■■□□□ 1.4
TUBE1-206ENST00000603722 PHF8Q9UPP1 1060 aa23.79■■□□□ 1.4
TUBE1-206ENST00000603722 KIF1AQ12756 1690 aa23.79■■□□□ 1.4
TUBE1-206ENST00000603722 MINK1Q8N4C8 1332 aaPredicted RBP23.79■■□□□ 1.4
TUBE1-206ENST00000603722 ADGRB2O60241 1585 aa23.78■■□□□ 1.4
TUBE1-206ENST00000603722 RXRBP28702 533 aa23.78■■□□□ 1.4
TUBE1-206ENST00000603722 NGLY1Q96IV0 654 aa23.78■■□□□ 1.4
TUBE1-206ENST00000603722 COL22A1Q8NFW1 1626 aaPredicted RBP23.77■■□□□ 1.4
TUBE1-206ENST00000603722 ANKARQ7Z5J8 1434 aa23.76■■□□□ 1.39
TUBE1-206ENST00000603722 KRT28Q7Z3Y7 464 aa23.75■■□□□ 1.39
TUBE1-206ENST00000603722 SPATA31A3Q5VYP0 1347 aa23.74■■□□□ 1.39
TUBE1-206ENST00000603722 PMFBP1Q8TBY8 1022 aa23.72■■□□□ 1.39
TUBE1-206ENST00000603722 QTRT2Q9H974 415 aaKnown RBP23.72■■□□□ 1.39
TUBE1-206ENST00000603722 EIF3AQ14152 1382 aaKnown RBP23.72■■□□□ 1.39
TUBE1-206ENST00000603722 USP32Q8NFA0 1604 aa23.71■■□□□ 1.39
TUBE1-206ENST00000603722 TULP4Q9NRJ4 1543 aa23.7■■□□□ 1.38
TUBE1-206ENST00000603722 TNS3Q68CZ2 1445 aa23.7■■□□□ 1.38
TUBE1-206ENST00000603722 PRR36Q9H6K5 1346 aa23.7■■□□□ 1.38
TUBE1-206ENST00000603722 WASLO00401 505 aaPredicted RBP23.7■■□□□ 1.38
TUBE1-206ENST00000603722 PSME1Q06323 249 aa23.7■■□□□ 1.38
TUBE1-206ENST00000603722 USP21Q9UK80 565 aa23.7■■□□□ 1.38
TUBE1-206ENST00000603722 CDK12Q9NYV4 1490 aaPredicted RBP23.69■■□□□ 1.38
TUBE1-206ENST00000603722 RBM6P78332 1123 aaKnown RBP23.68■■□□□ 1.38
TUBE1-206ENST00000603722 FNBP4Q8N3X1 1017 aaPredicted RBP23.68■■□□□ 1.38
TUBE1-206ENST00000603722 SBNO1A3KN83 1393 aa23.67■■□□□ 1.38
TUBE1-206ENST00000603722 NBPF1Q3BBV0 1214 aa23.67■■□□□ 1.38
TUBE1-206ENST00000603722 SIN3AQ96ST3 1273 aa23.67■■□□□ 1.38
TUBE1-206ENST00000603722 ARHGEF28Q8N1W1 1705 aaKnown RBP23.67■■□□□ 1.38
TUBE1-206ENST00000603722 RGS12O14924 1447 aa23.67■■□□□ 1.38
TUBE1-206ENST00000603722 LMOD2Q6P5Q4 547 aa23.65■■□□□ 1.38
TUBE1-206ENST00000603722 L3MBTL2Q969R5 705 aa23.65■■□□□ 1.38
TUBE1-206ENST00000603722 PLEKHG5O94827 1062 aa23.64■■□□□ 1.37
TUBE1-206ENST00000603722 TRPC5Q9UL62 973 aaPredicted RBP23.64■■□□□ 1.37
TUBE1-206ENST00000603722 RGPD8O14715 1765 aaPredicted RBP23.64■■□□□ 1.37
TUBE1-206ENST00000603722 KIAA1210Q9ULL0 1709 aa23.64■■□□□ 1.37
TUBE1-206ENST00000603722 HAP1P54257 671 aaPredicted RBP23.63■■□□□ 1.37
TUBE1-206ENST00000603722 NEUROD1Q13562 356 aa23.63■■□□□ 1.37
TUBE1-206ENST00000603722 ARHGEF10O15013 1369 aa23.63■■□□□ 1.37
TUBE1-206ENST00000603722 ATRNO75882 1429 aa23.62■■□□□ 1.37
TUBE1-206ENST00000603722 CABLES1Q8TDN4 633 aa23.62■■□□□ 1.37
TUBE1-206ENST00000603722 GPRASP1Q5JY77 1395 aa23.62■■□□□ 1.37
TUBE1-206ENST00000603722 ATP7BP35670 1465 aa23.62■■□□□ 1.37
TUBE1-206ENST00000603722 BCL9LQ86UU0 1499 aa23.61■■□□□ 1.37
TUBE1-206ENST00000603722 NGDNQ8NEJ9 315 aaKnown RBP23.6■■□□□ 1.37
TUBE1-206ENST00000603722 NUDT16Q96DE0 195 aaKnown RBP23.59■■□□□ 1.37
TUBE1-206ENST00000603722 CDK19Q9BWU1 502 aa23.59■■□□□ 1.37
TUBE1-206ENST00000603722 UPF1Q92900 1129 aaKnown RBP eCLIP23.57■■□□□ 1.36
TUBE1-206ENST00000603722 SLIT2O94813 1529 aa23.56■■□□□ 1.36
TUBE1-206ENST00000603722 CENPJQ9HC77 1338 aaPredicted RBP23.56■■□□□ 1.36
TUBE1-206ENST00000603722 UNC5CLQ8IV45 518 aa23.54■■□□□ 1.36
TUBE1-206ENST00000603722 TRPM3Q9HCF6 1732 aaPredicted RBP23.53■■□□□ 1.36
TUBE1-206ENST00000603722 MARF1Q9Y4F3 1742 aaKnown RBP23.53■■□□□ 1.36
TUBE1-206ENST00000603722 PAK3O75914 559 aaPredicted RBP23.53■■□□□ 1.36
TUBE1-206ENST00000603722 GJD4Q96KN9 370 aaPredicted RBP23.51■■□□□ 1.35
TUBE1-206ENST00000603722 ROCK2O75116 1388 aaKnown RBP23.51■■□□□ 1.35
TUBE1-206ENST00000603722 SRPK2P78362 688 aaKnown RBP23.5■■□□□ 1.35
TUBE1-206ENST00000603722 TRIM26Q12899 539 aaPredicted RBP23.5■■□□□ 1.35
TUBE1-206ENST00000603722 CCDC61Q9Y6R9 512 aa23.5■■□□□ 1.35
TUBE1-206ENST00000603722 ABCA3Q99758 1704 aa23.5■■□□□ 1.35
TUBE1-206ENST00000603722 ITSN1Q15811 1721 aa23.49■■□□□ 1.35
TUBE1-206ENST00000603722 TRPM1Q7Z4N2 1603 aa23.48■■□□□ 1.35
TUBE1-206ENST00000603722 ALS2Q96Q42 1657 aa23.48■■□□□ 1.35
TUBE1-206ENST00000603722 ACEP12821 1306 aa23.48■■□□□ 1.35
TUBE1-206ENST00000603722 POLR3AO14802 1390 aaPredicted RBP23.48■■□□□ 1.35
TUBE1-206ENST00000603722 RALGAPBQ86X10 1494 aa23.48■■□□□ 1.35
TUBE1-206ENST00000603722 TOPAZ1Q8N9V7 1692 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms