RNA–Protein interactions for RNA: ENST00000603038.1

CHCHD2P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3, humanhuman

BASIC

Gene CHCHD2P3, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2P3-201ENST00000603038 NUTM2FA1L443 756 aa23.02■■□□□ 1.28
CHCHD2P3-201ENST00000603038 MYOM2P54296 1465 aa23.02■■□□□ 1.28
CHCHD2P3-201ENST00000603038 NHSL1Q5SYE7 1610 aa23.01■■□□□ 1.27
CHCHD2P3-201ENST00000603038 NUTM2BA6NNL0 878 aaPredicted RBP23■■□□□ 1.27
CHCHD2P3-201ENST00000603038 NUTM2EB1AL46 878 aaPredicted RBP23■■□□□ 1.27
CHCHD2P3-201ENST00000603038 NUTM2AQ8IVF1 878 aaPredicted RBP23■■□□□ 1.27
CHCHD2P3-201ENST00000603038 SPATA31A6Q5VVP1 1343 aa23■■□□□ 1.27
CHCHD2P3-201ENST00000603038 DHX57Q6P158 1386 aaKnown RBP23■■□□□ 1.27
CHCHD2P3-201ENST00000603038 LRRC59Q96AG4 307 aaKnown RBP22.99■■□□□ 1.27
CHCHD2P3-201ENST00000603038 SHPRHQ149N8 1683 aa22.98■■□□□ 1.27
CHCHD2P3-201ENST00000603038 KNDC1Q76NI1 1749 aa22.97■■□□□ 1.27
CHCHD2P3-201ENST00000603038 ESCO1Q5FWF5 840 aa22.97■■□□□ 1.27
CHCHD2P3-201ENST00000603038 SIRT1Q96EB6 747 aa22.97■■□□□ 1.27
CHCHD2P3-201ENST00000603038 SAFB2Q14151 953 aaKnown RBP eCLIP22.96■■□□□ 1.27
CHCHD2P3-201ENST00000603038 SOS2Q07890 1332 aaPredicted RBP22.95■■□□□ 1.26
CHCHD2P3-201ENST00000603038 MEX3CQ5U5Q3 659 aaKnown RBP22.94■■□□□ 1.26
CHCHD2P3-201ENST00000603038 PRAM1Q96QH2 718 aa22.94■■□□□ 1.26
CHCHD2P3-201ENST00000603038 CDC42BPGQ6DT37 1551 aa22.93■■□□□ 1.26
CHCHD2P3-201ENST00000603038 PNPLA6Q8IY17 1366 aa22.92■■□□□ 1.26
CHCHD2P3-201ENST00000603038 TRAK1Q9UPV9 953 aa22.92■■□□□ 1.26
CHCHD2P3-201ENST00000603038 FOXO3O43524 673 aa22.91■■□□□ 1.26
CHCHD2P3-201ENST00000603038 XPCQ01831 940 aaPredicted RBP22.91■■□□□ 1.26
CHCHD2P3-201ENST00000603038 LAMC1P11047 1609 aa22.9■■□□□ 1.26
CHCHD2P3-201ENST00000603038 ADGRB1O14514 1584 aa22.9■■□□□ 1.26
CHCHD2P3-201ENST00000603038 POGKQ9P215 609 aa22.88■■□□□ 1.25
CHCHD2P3-201ENST00000603038 STAC3Q96MF2 364 aa22.87■■□□□ 1.25
CHCHD2P3-201ENST00000603038 FMN2Q9NZ56 1722 aa22.86■■□□□ 1.25
CHCHD2P3-201ENST00000603038 RGPD8O14715 1765 aaPredicted RBP22.86■■□□□ 1.25
CHCHD2P3-201ENST00000603038 NPHP3Q7Z494 1330 aa22.84■■□□□ 1.25
CHCHD2P3-201ENST00000603038 ADAMTS2O95450 1211 aa22.84■■□□□ 1.25
CHCHD2P3-201ENST00000603038 SIN3AQ96ST3 1273 aa22.84■■□□□ 1.25
CHCHD2P3-201ENST00000603038 HIRIP3Q9BW71 556 aaPredicted RBP22.84■■□□□ 1.25
CHCHD2P3-201ENST00000603038 DLC1Q96QB1 1528 aa22.83■■□□□ 1.25
CHCHD2P3-201ENST00000603038 PXDNQ92626 1479 aa22.83■■□□□ 1.25
CHCHD2P3-201ENST00000603038 AFF2P51816 1311 aa22.82■■□□□ 1.24
CHCHD2P3-201ENST00000603038 ZNF772Q68DY9 489 aaPredicted RBP22.82■■□□□ 1.24
CHCHD2P3-201ENST00000603038 C8orf37Q96NL8 207 aa22.82■■□□□ 1.24
CHCHD2P3-201ENST00000603038 MINK1Q8N4C8 1332 aaPredicted RBP22.82■■□□□ 1.24
CHCHD2P3-201ENST00000603038 NBPF1Q3BBV0 1214 aa22.8■■□□□ 1.24
CHCHD2P3-201ENST00000603038 PHF8Q9UPP1 1060 aa22.8■■□□□ 1.24
CHCHD2P3-201ENST00000603038 KRT28Q7Z3Y7 464 aa22.79■■□□□ 1.24
CHCHD2P3-201ENST00000603038 PMFBP1Q8TBY8 1022 aa22.77■■□□□ 1.24
CHCHD2P3-201ENST00000603038 NGLY1Q96IV0 654 aa22.77■■□□□ 1.24
CHCHD2P3-201ENST00000603038 L3MBTL2Q969R5 705 aa22.76■■□□□ 1.23
CHCHD2P3-201ENST00000603038 PRR36Q9H6K5 1346 aa22.76■■□□□ 1.23
CHCHD2P3-201ENST00000603038 NEUROD1Q13562 356 aa22.75■■□□□ 1.23
CHCHD2P3-201ENST00000603038 USP32Q8NFA0 1604 aa22.75■■□□□ 1.23
CHCHD2P3-201ENST00000603038 WASLO00401 505 aaPredicted RBP22.74■■□□□ 1.23
CHCHD2P3-201ENST00000603038 SPATA31A3Q5VYP0 1347 aa22.74■■□□□ 1.23
CHCHD2P3-201ENST00000603038 RXRBP28702 533 aa22.73■■□□□ 1.23
CHCHD2P3-201ENST00000603038 QTRT2Q9H974 415 aaKnown RBP22.73■■□□□ 1.23
CHCHD2P3-201ENST00000603038 COL22A1Q8NFW1 1626 aaPredicted RBP22.72■■□□□ 1.23
CHCHD2P3-201ENST00000603038 ADGRB2O60241 1585 aa22.71■■□□□ 1.23
CHCHD2P3-201ENST00000603038 KIF1AQ12756 1690 aa22.71■■□□□ 1.23
CHCHD2P3-201ENST00000603038 ARHGEF28Q8N1W1 1705 aaKnown RBP22.71■■□□□ 1.23
CHCHD2P3-201ENST00000603038 PLEKHG5O94827 1062 aa22.7■■□□□ 1.22
CHCHD2P3-201ENST00000603038 PSME1Q06323 249 aa22.7■■□□□ 1.22
CHCHD2P3-201ENST00000603038 ANKARQ7Z5J8 1434 aa22.69■■□□□ 1.22
CHCHD2P3-201ENST00000603038 FNBP4Q8N3X1 1017 aaPredicted RBP22.68■■□□□ 1.22
CHCHD2P3-201ENST00000603038 CABLES1Q8TDN4 633 aa22.68■■□□□ 1.22
CHCHD2P3-201ENST00000603038 USP21Q9UK80 565 aa22.67■■□□□ 1.22
CHCHD2P3-201ENST00000603038 KIAA1210Q9ULL0 1709 aa22.67■■□□□ 1.22
CHCHD2P3-201ENST00000603038 CDK19Q9BWU1 502 aa22.66■■□□□ 1.22
CHCHD2P3-201ENST00000603038 LMOD2Q6P5Q4 547 aa22.65■■□□□ 1.22
CHCHD2P3-201ENST00000603038 NUDT16Q96DE0 195 aaKnown RBP22.65■■□□□ 1.22
CHCHD2P3-201ENST00000603038 RBM6P78332 1123 aaKnown RBP22.64■■□□□ 1.21
CHCHD2P3-201ENST00000603038 TULP4Q9NRJ4 1543 aa22.63■■□□□ 1.21
CHCHD2P3-201ENST00000603038 TRIM26Q12899 539 aaPredicted RBP22.63■■□□□ 1.21
CHCHD2P3-201ENST00000603038 TNS3Q68CZ2 1445 aa22.63■■□□□ 1.21
CHCHD2P3-201ENST00000603038 SBNO1A3KN83 1393 aa22.63■■□□□ 1.21
CHCHD2P3-201ENST00000603038 MARF1Q9Y4F3 1742 aaKnown RBP22.6■■□□□ 1.21
CHCHD2P3-201ENST00000603038 NBPF8Q3BBV2 869 aa22.6■■□□□ 1.21
CHCHD2P3-201ENST00000603038 NGDNQ8NEJ9 315 aaKnown RBP22.6■■□□□ 1.21
CHCHD2P3-201ENST00000603038 EIF3AQ14152 1382 aaKnown RBP22.6■■□□□ 1.21
CHCHD2P3-201ENST00000603038 BCL9LQ86UU0 1499 aa22.6■■□□□ 1.21
CHCHD2P3-201ENST00000603038 TRPC5Q9UL62 973 aaPredicted RBP22.59■■□□□ 1.21
CHCHD2P3-201ENST00000603038 ATP7BP35670 1465 aa22.58■■□□□ 1.2
CHCHD2P3-201ENST00000603038 RGS12O14924 1447 aa22.57■■□□□ 1.2
CHCHD2P3-201ENST00000603038 ATRNO75882 1429 aa22.57■■□□□ 1.2
CHCHD2P3-201ENST00000603038 UPF1Q92900 1129 aaKnown RBP eCLIP22.57■■□□□ 1.2
CHCHD2P3-201ENST00000603038 CDK12Q9NYV4 1490 aaPredicted RBP22.57■■□□□ 1.2
CHCHD2P3-201ENST00000603038 TRPM3Q9HCF6 1732 aaPredicted RBP22.57■■□□□ 1.2
CHCHD2P3-201ENST00000603038 CENPJQ9HC77 1338 aaPredicted RBP22.57■■□□□ 1.2
CHCHD2P3-201ENST00000603038 GPRASP1Q5JY77 1395 aa22.56■■□□□ 1.2
CHCHD2P3-201ENST00000603038 HAP1P54257 671 aaPredicted RBP22.56■■□□□ 1.2
CHCHD2P3-201ENST00000603038 PAK3O75914 559 aaPredicted RBP22.55■■□□□ 1.2
CHCHD2P3-201ENST00000603038 ARHGEF10O15013 1369 aa22.54■■□□□ 1.2
CHCHD2P3-201ENST00000603038 FAM83GA6ND36 823 aa22.54■■□□□ 1.2
CHCHD2P3-201ENST00000603038 CABP2Q9NPB3 220 aa22.54■■□□□ 1.2
CHCHD2P3-201ENST00000603038 CCDC61Q9Y6R9 512 aa22.54■■□□□ 1.2
CHCHD2P3-201ENST00000603038 UNC5CLQ8IV45 518 aa22.53■■□□□ 1.2
CHCHD2P3-201ENST00000603038 ACEP12821 1306 aa22.53■■□□□ 1.2
CHCHD2P3-201ENST00000603038 TRPM1Q7Z4N2 1603 aa22.53■■□□□ 1.2
CHCHD2P3-201ENST00000603038 SLIT2O94813 1529 aa22.52■■□□□ 1.2
CHCHD2P3-201ENST00000603038 PLEKHG3A1L390 1219 aa22.52■■□□□ 1.2
CHCHD2P3-201ENST00000603038 ALS2Q96Q42 1657 aa22.52■■□□□ 1.2
CHCHD2P3-201ENST00000603038 SRPK2P78362 688 aaKnown RBP22.51■■□□□ 1.19
CHCHD2P3-201ENST00000603038 GJD4Q96KN9 370 aaPredicted RBP22.51■■□□□ 1.19
CHCHD2P3-201ENST00000603038 ABCA3Q99758 1704 aa22.5■■□□□ 1.19
CHCHD2P3-201ENST00000603038 NUTM2GQ5VZR2 741 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms