RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 SENP2Q9HC62 589 aa7.29□□□□□ -1.24
SGMS1-207ENST00000602619 VSIG10Q8N0Z9 540 aa7.28□□□□□ -1.24
SGMS1-207ENST00000602619 HPS1Q92902 700 aa7.28□□□□□ -1.24
SGMS1-207ENST00000602619 MRGPRX2Q96LB1 330 aa7.28□□□□□ -1.24
SGMS1-207ENST00000602619 DAXXQ9UER7 740 aaPredicted RBP7.28□□□□□ -1.24
SGMS1-207ENST00000602619 LOC100996750A0A140TA64 210 aa7.27□□□□□ -1.25
SGMS1-207ENST00000602619 DDX11L8A8MPP1 907 aa7.27□□□□□ -1.25
SGMS1-207ENST00000602619 FECHP22830 423 aa7.27□□□□□ -1.25
SGMS1-207ENST00000602619 GCGRP47871 477 aa7.27□□□□□ -1.25
SGMS1-207ENST00000602619 HAP1P54257 671 aaPredicted RBP7.27□□□□□ -1.25
SGMS1-207ENST00000602619 RNF19BQ6ZMZ0 732 aa7.27□□□□□ -1.25
SGMS1-207ENST00000602619 KRTAP4-6Q9BYQ5 205 aa7.27□□□□□ -1.25
SGMS1-207ENST00000602619 LORP23490 312 aaPredicted RBP7.26□□□□□ -1.25
SGMS1-207ENST00000602619 TRIM32Q13049 653 aa7.26□□□□□ -1.25
SGMS1-207ENST00000602619 MSS51Q4VC12 460 aa7.26□□□□□ -1.25
SGMS1-207ENST00000602619 KIFC2Q96AC6 838 aa7.25□□□□□ -1.25
SGMS1-207ENST00000602619 HIC1Q14526 733 aa7.24□□□□□ -1.25
SGMS1-207ENST00000602619 NLRP7Q8WX94 980 aa7.24□□□□□ -1.25
SGMS1-207ENST00000602619 SEMA3EO15041 775 aa7.23□□□□□ -1.25
SGMS1-207ENST00000602619 KDM2AQ9Y2K7 1162 aa7.23□□□□□ -1.25
SGMS1-207ENST00000602619 FAM181BA6NEQ2 426 aa7.22□□□□□ -1.25
SGMS1-207ENST00000602619 GMPRP36959 345 aa7.22□□□□□ -1.25
SGMS1-207ENST00000602619 MMP16P51512 607 aa7.22□□□□□ -1.25
SGMS1-207ENST00000602619 SLC16A10Q8TF71 515 aa7.22□□□□□ -1.25
SGMS1-207ENST00000602619 NXF1Q9UBU9 619 aaKnown RBP7.22□□□□□ -1.25
SGMS1-207ENST00000602619 ZSCAN1Q8NBB4 408 aa7.21□□□□□ -1.26
SGMS1-207ENST00000602619 SKOR1P84550 965 aa7.2□□□□□ -1.26
SGMS1-207ENST00000602619 RC3H1Q5TC82 1133 aaKnown RBP7.2□□□□□ -1.26
SGMS1-207ENST00000602619 PHOX2BQ99453 314 aa7.2□□□□□ -1.26
SGMS1-207ENST00000602619 RBM26Q5T8P6 1007 aaKnown RBP7.19□□□□□ -1.26
SGMS1-207ENST00000602619 SULF1Q8IWU6 871 aa7.19□□□□□ -1.26
SGMS1-207ENST00000602619 REPIN1Q9BWE0 567 aaKnown RBP7.19□□□□□ -1.26
SGMS1-207ENST00000602619 GNPATO15228 680 aa7.18□□□□□ -1.26
SGMS1-207ENST00000602619 DXOO77932 396 aaKnown RBP7.17□□□□□ -1.26
SGMS1-207ENST00000602619 VEGFBP49765 207 aa7.17□□□□□ -1.26
SGMS1-207ENST00000602619 GRIPAP1Q4V328 841 aa7.17□□□□□ -1.26
SGMS1-207ENST00000602619 ALDH1A1P00352 501 aa7.16□□□□□ -1.26
SGMS1-207ENST00000602619 Q3C1V9 767 aa7.16□□□□□ -1.26
SGMS1-207ENST00000602619 TRIM46Q7Z4K8 759 aa7.16□□□□□ -1.26
SGMS1-207ENST00000602619 IRF7Q92985 503 aa7.16□□□□□ -1.26
SGMS1-207ENST00000602619 USB1Q9BQ65 265 aaKnown RBP7.16□□□□□ -1.26
SGMS1-207ENST00000602619 GPR37O15354 613 aa7.15□□□□□ -1.26
SGMS1-207ENST00000602619 BMP1P13497 986 aa7.15□□□□□ -1.26
SGMS1-207ENST00000602619 WNT7BP56706 349 aa7.15□□□□□ -1.26
SGMS1-207ENST00000602619 NPAS3Q8IXF0 933 aa7.15□□□□□ -1.26
SGMS1-207ENST00000602619 CCDC24Q8N4L8 307 aa7.15□□□□□ -1.26
SGMS1-207ENST00000602619 ERBB4Q15303 1308 aa7.15□□□□□ -1.26
SGMS1-207ENST00000602619 H3BM21 787 aa7.14□□□□□ -1.27
SGMS1-207ENST00000602619 SIAH2O43255 324 aa7.13□□□□□ -1.27
SGMS1-207ENST00000602619 SUZ12Q15022 739 aaKnown RBP7.12□□□□□ -1.27
SGMS1-207ENST00000602619 CAPN5O15484 640 aaPredicted RBP7.11□□□□□ -1.27
SGMS1-207ENST00000602619 TESPA1A2RU30 521 aaPredicted RBP7.1□□□□□ -1.27
SGMS1-207ENST00000602619 CD46P15529 392 aa7.1□□□□□ -1.27
SGMS1-207ENST00000602619 P3H3Q8IVL6 736 aa7.1□□□□□ -1.27
SGMS1-207ENST00000602619 HLA-CQ95604 372 aa7.1□□□□□ -1.27
SGMS1-207ENST00000602619 KDM4AO75164 1064 aa7.09□□□□□ -1.27
SGMS1-207ENST00000602619 PTCRAQ6ISU1 281 aaPredicted RBP7.09□□□□□ -1.27
SGMS1-207ENST00000602619 ZFP42Q96MM3 310 aa7.08□□□□□ -1.28
SGMS1-207ENST00000602619 WASF2Q9Y6W5 498 aa7.08□□□□□ -1.28
SGMS1-207ENST00000602619 EHBP1Q8NDI1 1231 aa7.07□□□□□ -1.28
SGMS1-207ENST00000602619 SMYD5Q6GMV2 418 aa7.06□□□□□ -1.28
SGMS1-207ENST00000602619 JUNDP17535 347 aa7.05□□□□□ -1.28
SGMS1-207ENST00000602619 SYMPKQ92797 1274 aaKnown RBP7.05□□□□□ -1.28
SGMS1-207ENST00000602619 SH3BP2P78314 561 aa7.04□□□□□ -1.28
SGMS1-207ENST00000602619 GUCA2AQ02747 115 aa7.04□□□□□ -1.28
SGMS1-207ENST00000602619 HOXA2O43364 376 aa7.03□□□□□ -1.28
SGMS1-207ENST00000602619 GSK3AP49840 483 aa7.03□□□□□ -1.28
SGMS1-207ENST00000602619 USP46P62068 366 aa7.03□□□□□ -1.28
SGMS1-207ENST00000602619 KCNMA1Q12791 1236 aa7.02□□□□□ -1.29
SGMS1-207ENST00000602619 KCTD17Q8N5Z5 321 aa7.02□□□□□ -1.29
SGMS1-207ENST00000602619 NUDT12Q9BQG2 462 aa7.02□□□□□ -1.29
SGMS1-207ENST00000602619 SOBPA7XYQ1 873 aa7.01□□□□□ -1.29
SGMS1-207ENST00000602619 VSIG8P0DPA2 414 aa7.01□□□□□ -1.29
SGMS1-207ENST00000602619 MRPL14Q6P1L8 145 aaKnown RBP7□□□□□ -1.29
SGMS1-207ENST00000602619 PURBQ96QR8 312 aaKnown RBP7□□□□□ -1.29
SGMS1-207ENST00000602619 TLL2Q9Y6L7 1015 aa6.99□□□□□ -1.29
SGMS1-207ENST00000602619 RETREG3Q86VR2 466 aa6.98□□□□□ -1.29
SGMS1-207ENST00000602619 GPIHBP1Q8IV16 184 aa6.98□□□□□ -1.29
SGMS1-207ENST00000602619 BCANQ96GW7 911 aa6.98□□□□□ -1.29
SGMS1-207ENST00000602619 MDM2Q00987 491 aaPredicted RBP6.97□□□□□ -1.29
SGMS1-207ENST00000602619 NNTQ13423 1086 aa6.97□□□□□ -1.29
SGMS1-207ENST00000602619 SCARF1Q14162 830 aa6.97□□□□□ -1.29
SGMS1-207ENST00000602619 BAP1Q92560 729 aa6.97□□□□□ -1.29
SGMS1-207ENST00000602619 TIMP2P16035 220 aa6.96□□□□□ -1.3
SGMS1-207ENST00000602619 LINC01559Q495D7 138 aa6.96□□□□□ -1.3
SGMS1-207ENST00000602619 KLF16Q9BXK1 252 aaPredicted RBP6.96□□□□□ -1.3
SGMS1-207ENST00000602619 UNC93B1Q9H1C4 597 aa6.96□□□□□ -1.3
SGMS1-207ENST00000602619 PLEKHG3A1L390 1219 aa6.95□□□□□ -1.3
SGMS1-207ENST00000602619 CCNYL3P0C7X3 344 aa6.95□□□□□ -1.3
SGMS1-207ENST00000602619 MPNDQ8N594 471 aa6.95□□□□□ -1.3
SGMS1-207ENST00000602619 EVA1BQ9NVM1 165 aa6.95□□□□□ -1.3
SGMS1-207ENST00000602619 PCDHGC3Q9UN70 934 aa6.95□□□□□ -1.3
SGMS1-207ENST00000602619 IRF6O14896 467 aa6.94□□□□□ -1.3
SGMS1-207ENST00000602619 MS4A1P11836 297 aa6.94□□□□□ -1.3
SGMS1-207ENST00000602619 VARSP26640 1264 aaKnown RBP6.94□□□□□ -1.3
SGMS1-207ENST00000602619 WDR4P57081 412 aaKnown RBP6.94□□□□□ -1.3
SGMS1-207ENST00000602619 MAP2K5Q13163 448 aa6.94□□□□□ -1.3
SGMS1-207ENST00000602619 TMEM151AQ8N4L1 468 aa6.94□□□□□ -1.3
SGMS1-207ENST00000602619 PPFIA3O75145 1194 aa6.93□□□□□ -1.3
SGMS1-207ENST00000602619 RASSF7Q02833 373 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms