RNA–Protein interactions for RNA: ENST00000602509.5

PPFIA3-205, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-205ENST00000602509 KDM2AQ9Y2K7 1162 aa38.42■■■■□ 3.74
PPFIA3-205ENST00000602509 DCAF11Q8TEB1 546 aa38.41■■■■□ 3.74
PPFIA3-205ENST00000602509 NHSL1Q5SYE7 1610 aa38.41■■■■□ 3.74
PPFIA3-205ENST00000602509 SIRT1Q96EB6 747 aa38.4■■■■□ 3.74
PPFIA3-205ENST00000602509 PLEKHH1Q9ULM0 1364 aa38.4■■■■□ 3.74
PPFIA3-205ENST00000602509 SHPRHQ149N8 1683 aa38.39■■■■□ 3.74
PPFIA3-205ENST00000602509 NUTM2BA6NNL0 878 aaPredicted RBP38.39■■■■□ 3.74
PPFIA3-205ENST00000602509 NUTM2EB1AL46 878 aaPredicted RBP38.39■■■■□ 3.74
PPFIA3-205ENST00000602509 POTEAQ6S8J7 498 aa38.39■■■■□ 3.74
PPFIA3-205ENST00000602509 NUTM2AQ8IVF1 878 aaPredicted RBP38.39■■■■□ 3.74
PPFIA3-205ENST00000602509 CDC42BPGQ6DT37 1551 aa38.38■■■■□ 3.73
PPFIA3-205ENST00000602509 LRP6O75581 1613 aa38.38■■■■□ 3.73
PPFIA3-205ENST00000602509 ESCO1Q5FWF5 840 aa38.37■■■■□ 3.73
PPFIA3-205ENST00000602509 STAC3Q96MF2 364 aa38.36■■■■□ 3.73
PPFIA3-205ENST00000602509 LAMC1P11047 1609 aa38.36■■■■□ 3.73
PPFIA3-205ENST00000602509 KNDC1Q76NI1 1749 aa38.35■■■■□ 3.73
PPFIA3-205ENST00000602509 NUTM2FA1L443 756 aa38.32■■■■□ 3.72
PPFIA3-205ENST00000602509 SOS2Q07890 1332 aaPredicted RBP38.3■■■■□ 3.72
PPFIA3-205ENST00000602509 PRAM1Q96QH2 718 aa38.29■■■■□ 3.72
PPFIA3-205ENST00000602509 PNPLA6Q8IY17 1366 aa38.29■■■■□ 3.72
PPFIA3-205ENST00000602509 POGKQ9P215 609 aa38.28■■■■□ 3.72
PPFIA3-205ENST00000602509 NPHP3Q7Z494 1330 aa38.27■■■■□ 3.72
PPFIA3-205ENST00000602509 SAFB2Q14151 953 aaKnown RBP eCLIP38.26■■■■□ 3.72
PPFIA3-205ENST00000602509 ZNF772Q68DY9 489 aaPredicted RBP38.26■■■■□ 3.72
PPFIA3-205ENST00000602509 FOXO3O43524 673 aa38.22■■■■□ 3.71
PPFIA3-205ENST00000602509 TRAK1Q9UPV9 953 aa38.22■■■■□ 3.71
PPFIA3-205ENST00000602509 ADGRB1O14514 1584 aa38.19■■■■□ 3.7
PPFIA3-205ENST00000602509 DLC1Q96QB1 1528 aa38.18■■■■□ 3.7
PPFIA3-205ENST00000602509 XPCQ01831 940 aaPredicted RBP38.16■■■■□ 3.7
PPFIA3-205ENST00000602509 C8orf37Q96NL8 207 aa38.15■■■■□ 3.7
PPFIA3-205ENST00000602509 AFF2P51816 1311 aa38.13■■■■□ 3.7
PPFIA3-205ENST00000602509 ADAMTS2O95450 1211 aa38.13■■■■□ 3.69
PPFIA3-205ENST00000602509 FMN2Q9NZ56 1722 aa38.12■■■■□ 3.69
PPFIA3-205ENST00000602509 PXDNQ92626 1479 aa38.1■■■■□ 3.69
PPFIA3-205ENST00000602509 PHF8Q9UPP1 1060 aa38.08■■■■□ 3.69
PPFIA3-205ENST00000602509 HIRIP3Q9BW71 556 aaPredicted RBP38.07■■■■□ 3.68
PPFIA3-205ENST00000602509 NGLY1Q96IV0 654 aa38.06■■■■□ 3.68
PPFIA3-205ENST00000602509 MINK1Q8N4C8 1332 aaPredicted RBP38.06■■■■□ 3.68
PPFIA3-205ENST00000602509 RXRBP28702 533 aa38.04■■■■□ 3.68
PPFIA3-205ENST00000602509 KRT28Q7Z3Y7 464 aa38.04■■■■□ 3.68
PPFIA3-205ENST00000602509 KIF1AQ12756 1690 aa38.02■■■■□ 3.68
PPFIA3-205ENST00000602509 PSME1Q06323 249 aa38■■■■□ 3.67
PPFIA3-205ENST00000602509 ANKARQ7Z5J8 1434 aa37.99■■■■□ 3.67
PPFIA3-205ENST00000602509 EIF3AQ14152 1382 aaKnown RBP37.98■■■■□ 3.67
PPFIA3-205ENST00000602509 ADGRB2O60241 1585 aa37.97■■■■□ 3.67
PPFIA3-205ENST00000602509 SPATA31A3Q5VYP0 1347 aa37.97■■■■□ 3.67
PPFIA3-205ENST00000602509 QTRT2Q9H974 415 aaKnown RBP37.97■■■■□ 3.67
PPFIA3-205ENST00000602509 COL22A1Q8NFW1 1626 aaPredicted RBP37.97■■■■□ 3.67
PPFIA3-205ENST00000602509 WASLO00401 505 aaPredicted RBP37.96■■■■□ 3.67
PPFIA3-205ENST00000602509 PMFBP1Q8TBY8 1022 aa37.94■■■■□ 3.66
PPFIA3-205ENST00000602509 SIN3AQ96ST3 1273 aa37.92■■■■□ 3.66
PPFIA3-205ENST00000602509 USP21Q9UK80 565 aa37.91■■■■□ 3.66
PPFIA3-205ENST00000602509 NEUROD1Q13562 356 aa37.9■■■■□ 3.66
PPFIA3-205ENST00000602509 NBPF1Q3BBV0 1214 aa37.9■■■■□ 3.66
PPFIA3-205ENST00000602509 L3MBTL2Q969R5 705 aa37.9■■■■□ 3.66
PPFIA3-205ENST00000602509 RGPD8O14715 1765 aaPredicted RBP37.88■■■■□ 3.66
PPFIA3-205ENST00000602509 RBM6P78332 1123 aaKnown RBP37.88■■■■□ 3.65
PPFIA3-205ENST00000602509 LMOD2Q6P5Q4 547 aa37.87■■■■□ 3.65
PPFIA3-205ENST00000602509 FNBP4Q8N3X1 1017 aaPredicted RBP37.87■■■■□ 3.65
PPFIA3-205ENST00000602509 TNS3Q68CZ2 1445 aa37.87■■■■□ 3.65
PPFIA3-205ENST00000602509 PRR36Q9H6K5 1346 aa37.87■■■■□ 3.65
PPFIA3-205ENST00000602509 SBNO1A3KN83 1393 aa37.86■■■■□ 3.65
PPFIA3-205ENST00000602509 KIAA1210Q9ULL0 1709 aa37.86■■■■□ 3.65
PPFIA3-205ENST00000602509 TULP4Q9NRJ4 1543 aa37.86■■■■□ 3.65
PPFIA3-205ENST00000602509 USP32Q8NFA0 1604 aa37.85■■■■□ 3.65
PPFIA3-205ENST00000602509 HAP1P54257 671 aaPredicted RBP37.84■■■■□ 3.65
PPFIA3-205ENST00000602509 ARHGEF28Q8N1W1 1705 aaKnown RBP37.84■■■■□ 3.65
PPFIA3-205ENST00000602509 CDK12Q9NYV4 1490 aaPredicted RBP37.84■■■■□ 3.65
PPFIA3-205ENST00000602509 TRPC5Q9UL62 973 aaPredicted RBP37.83■■■■□ 3.65
PPFIA3-205ENST00000602509 GPRASP1Q5JY77 1395 aa37.82■■■■□ 3.65
PPFIA3-205ENST00000602509 ARHGEF10O15013 1369 aa37.8■■■■□ 3.64
PPFIA3-205ENST00000602509 PLEKHG5O94827 1062 aa37.8■■■■□ 3.64
PPFIA3-205ENST00000602509 NGDNQ8NEJ9 315 aaKnown RBP37.8■■■■□ 3.64
PPFIA3-205ENST00000602509 NUDT16Q96DE0 195 aaKnown RBP37.79■■■■□ 3.64
PPFIA3-205ENST00000602509 CDK19Q9BWU1 502 aa37.79■■■■□ 3.64
PPFIA3-205ENST00000602509 TRIM26Q12899 539 aaPredicted RBP37.77■■■■□ 3.64
PPFIA3-205ENST00000602509 CABLES1Q8TDN4 633 aa37.75■■■■□ 3.63
PPFIA3-205ENST00000602509 CENPJQ9HC77 1338 aaPredicted RBP37.72■■■■□ 3.63
PPFIA3-205ENST00000602509 RGS12O14924 1447 aa37.7■■■■□ 3.63
PPFIA3-205ENST00000602509 ATRNO75882 1429 aa37.7■■■■□ 3.63
PPFIA3-205ENST00000602509 ATP7BP35670 1465 aa37.7■■■■□ 3.63
PPFIA3-205ENST00000602509 BCL9LQ86UU0 1499 aa37.7■■■■□ 3.63
PPFIA3-205ENST00000602509 PAK3O75914 559 aaPredicted RBP37.69■■■■□ 3.62
PPFIA3-205ENST00000602509 CCDC61Q9Y6R9 512 aa37.67■■■■□ 3.62
PPFIA3-205ENST00000602509 MARF1Q9Y4F3 1742 aaKnown RBP37.66■■■■□ 3.62
PPFIA3-205ENST00000602509 UNC5CLQ8IV45 518 aa37.65■■■■□ 3.62
PPFIA3-205ENST00000602509 UPF1Q92900 1129 aaKnown RBP eCLIP37.65■■■■□ 3.62
PPFIA3-205ENST00000602509 SRPK2P78362 688 aaKnown RBP37.64■■■■□ 3.62
PPFIA3-205ENST00000602509 ROCK2O75116 1388 aaKnown RBP37.63■■■■□ 3.61
PPFIA3-205ENST00000602509 GJD4Q96KN9 370 aaPredicted RBP37.61■■■■□ 3.61
PPFIA3-205ENST00000602509 SLIT2O94813 1529 aa37.61■■■■□ 3.61
PPFIA3-205ENST00000602509 ITSN1Q15811 1721 aa37.6■■■■□ 3.61
PPFIA3-205ENST00000602509 TRPM3Q9HCF6 1732 aaPredicted RBP37.6■■■■□ 3.61
PPFIA3-205ENST00000602509 ACEP12821 1306 aa37.59■■■■□ 3.61
PPFIA3-205ENST00000602509 PLEKHG3A1L390 1219 aa37.58■■■■□ 3.61
PPFIA3-205ENST00000602509 NBPF8Q3BBV2 869 aa37.56■■■■□ 3.6
PPFIA3-205ENST00000602509 CABP2Q9NPB3 220 aa37.56■■■■□ 3.6
PPFIA3-205ENST00000602509 POLR3AO14802 1390 aaPredicted RBP37.55■■■■□ 3.6
PPFIA3-205ENST00000602509 TRPM1Q7Z4N2 1603 aa37.54■■■■□ 3.6
PPFIA3-205ENST00000602509 FAM83GA6ND36 823 aa37.54■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms