RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 MPHOSPH9Q99550 1183 aa30.18■■■□□ 2.42
PPFIA3-204ENST00000602492 SPATA31E1Q6ZUB1 1445 aa30.18■■■□□ 2.42
PPFIA3-204ENST00000602492 CDC42BPGQ6DT37 1551 aa30.18■■■□□ 2.42
PPFIA3-204ENST00000602492 ANKRD30BQ9BXX2 1392 aa30.17■■■□□ 2.42
PPFIA3-204ENST00000602492 STK26Q9P289 416 aa30.15■■■□□ 2.42
PPFIA3-204ENST00000602492 RGS12O14924 1447 aa30.14■■■□□ 2.42
PPFIA3-204ENST00000602492 ESCO1Q5FWF5 840 aa30.14■■■□□ 2.42
PPFIA3-204ENST00000602492 NPHP3Q7Z494 1330 aa30.14■■■□□ 2.42
PPFIA3-204ENST00000602492 TECPR2O15040 1411 aa30.13■■■□□ 2.41
PPFIA3-204ENST00000602492 LRPPRCP42704 1394 aaKnown RBP30.13■■■□□ 2.41
PPFIA3-204ENST00000602492 IFT172Q9UG01 1749 aa30.1■■■□□ 2.41
PPFIA3-204ENST00000602492 WAPLQ7Z5K2 1190 aa30.09■■■□□ 2.41
PPFIA3-204ENST00000602492 ABCC11Q96J66 1382 aa30.09■■■□□ 2.41
PPFIA3-204ENST00000602492 USP21Q9UK80 565 aa30.09■■■□□ 2.41
PPFIA3-204ENST00000602492 COL22A1Q8NFW1 1626 aaPredicted RBP30.08■■■□□ 2.41
PPFIA3-204ENST00000602492 PIK3C2GO75747 1445 aa30.08■■■□□ 2.41
PPFIA3-204ENST00000602492 TMEM132EQ6IEE7 984 aa30.07■■■□□ 2.4
PPFIA3-204ENST00000602492 PXDNQ92626 1479 aa30.06■■■□□ 2.4
PPFIA3-204ENST00000602492 FOXO3O43524 673 aa30.05■■■□□ 2.4
PPFIA3-204ENST00000602492 FNBP4Q8N3X1 1017 aaPredicted RBP30.05■■■□□ 2.4
PPFIA3-204ENST00000602492 TRPC5Q9UL62 973 aaPredicted RBP30.05■■■□□ 2.4
PPFIA3-204ENST00000602492 MYOM2P54296 1465 aa30.05■■■□□ 2.4
PPFIA3-204ENST00000602492 KNDC1Q76NI1 1749 aa30.05■■■□□ 2.4
PPFIA3-204ENST00000602492 ACIN1Q9UKV3 1341 aaKnown RBP30.04■■■□□ 2.4
PPFIA3-204ENST00000602492 NUTM2FA1L443 756 aa30.04■■■□□ 2.4
PPFIA3-204ENST00000602492 PLEKHH1Q9ULM0 1364 aa30.03■■■□□ 2.4
PPFIA3-204ENST00000602492 XPCQ01831 940 aaPredicted RBP30.03■■■□□ 2.4
PPFIA3-204ENST00000602492 YTHDC2Q9H6S0 1430 aaKnown RBP30.02■■■□□ 2.4
PPFIA3-204ENST00000602492 ATRNO75882 1429 aa29.98■■■□□ 2.39
PPFIA3-204ENST00000602492 FMN2Q9NZ56 1722 aa29.96■■■□□ 2.39
PPFIA3-204ENST00000602492 ATAD2Q6PL18 1390 aa29.96■■■□□ 2.39
PPFIA3-204ENST00000602492 SIRT1Q96EB6 747 aa29.96■■■□□ 2.39
PPFIA3-204ENST00000602492 C14orf93Q9H972 538 aaKnown RBP29.96■■■□□ 2.39
PPFIA3-204ENST00000602492 KIF1AQ12756 1690 aa29.93■■■□□ 2.38
PPFIA3-204ENST00000602492 NRXN1Q9ULB1 1477 aa29.93■■■□□ 2.38
PPFIA3-204ENST00000602492 DHX57Q6P158 1386 aaKnown RBP29.91■■■□□ 2.38
PPFIA3-204ENST00000602492 MARF1Q9Y4F3 1742 aaKnown RBP29.91■■■□□ 2.38
PPFIA3-204ENST00000602492 BCL9LQ86UU0 1499 aa29.91■■■□□ 2.38
PPFIA3-204ENST00000602492 SPATA31A3Q5VYP0 1347 aa29.91■■■□□ 2.38
PPFIA3-204ENST00000602492 CFAP70Q5T0N1 1121 aa29.9■■■□□ 2.38
PPFIA3-204ENST00000602492 KRT28Q7Z3Y7 464 aa29.88■■■□□ 2.37
PPFIA3-204ENST00000602492 PHF8Q9UPP1 1060 aa29.86■■■□□ 2.37
PPFIA3-204ENST00000602492 GJD4Q96KN9 370 aaPredicted RBP29.84■■■□□ 2.37
PPFIA3-204ENST00000602492 PRAM1Q96QH2 718 aa29.84■■■□□ 2.37
PPFIA3-204ENST00000602492 RAB3GAP2Q9H2M9 1393 aa29.84■■■□□ 2.37
PPFIA3-204ENST00000602492 SAFB2Q14151 953 aaKnown RBP eCLIP29.83■■■□□ 2.37
PPFIA3-204ENST00000602492 PSME1Q06323 249 aa29.82■■■□□ 2.36
PPFIA3-204ENST00000602492 TNS3Q68CZ2 1445 aa29.81■■■□□ 2.36
PPFIA3-204ENST00000602492 UNC5CLQ8IV45 518 aa29.81■■■□□ 2.36
PPFIA3-204ENST00000602492 EP400Q96L91 3159 aa29.81■■■□□ 2.36
PPFIA3-204ENST00000602492 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.8■■■□□ 2.36
PPFIA3-204ENST00000602492 POGKQ9P215 609 aa29.8■■■□□ 2.36
PPFIA3-204ENST00000602492 SLIT2O94813 1529 aa29.8■■■□□ 2.36
PPFIA3-204ENST00000602492 RGPD8O14715 1765 aaPredicted RBP29.8■■■□□ 2.36
PPFIA3-204ENST00000602492 HAP1P54257 671 aaPredicted RBP29.79■■■□□ 2.36
PPFIA3-204ENST00000602492 DLC1Q96QB1 1528 aa29.79■■■□□ 2.36
PPFIA3-204ENST00000602492 USP32Q8NFA0 1604 aa29.78■■■□□ 2.36
PPFIA3-204ENST00000602492 SBNO1A3KN83 1393 aa29.76■■■□□ 2.35
PPFIA3-204ENST00000602492 RALGAPBQ86X10 1494 aa29.75■■■□□ 2.35
PPFIA3-204ENST00000602492 ANKARQ7Z5J8 1434 aa29.74■■■□□ 2.35
PPFIA3-204ENST00000602492 LMOD2Q6P5Q4 547 aa29.73■■■□□ 2.35
PPFIA3-204ENST00000602492 CCDC125Q86Z20 511 aa29.73■■■□□ 2.35
PPFIA3-204ENST00000602492 CABLES1Q8TDN4 633 aa29.73■■■□□ 2.35
PPFIA3-204ENST00000602492 ARHGEF10O15013 1369 aa29.73■■■□□ 2.35
PPFIA3-204ENST00000602492 SRCAPQ6ZRS2 3230 aa29.73■■■□□ 2.35
PPFIA3-204ENST00000602492 ADGRB1O14514 1584 aa29.73■■■□□ 2.35
PPFIA3-204ENST00000602492 GLI3P10071 1580 aa29.72■■■□□ 2.35
PPFIA3-204ENST00000602492 PLEKHG5O94827 1062 aa29.71■■■□□ 2.35
PPFIA3-204ENST00000602492 TRAK1Q9UPV9 953 aa29.71■■■□□ 2.35
PPFIA3-204ENST00000602492 ADGRB2O60241 1585 aa29.71■■■□□ 2.35
PPFIA3-204ENST00000602492 PMFBP1Q8TBY8 1022 aa29.7■■■□□ 2.35
PPFIA3-204ENST00000602492 KDM2AQ9Y2K7 1162 aa29.68■■■□□ 2.34
PPFIA3-204ENST00000602492 HIRIP3Q9BW71 556 aaPredicted RBP29.67■■■□□ 2.34
PPFIA3-204ENST00000602492 EIF3AQ14152 1382 aaKnown RBP29.66■■■□□ 2.34
PPFIA3-204ENST00000602492 VPS72Q15906 364 aa29.66■■■□□ 2.34
PPFIA3-204ENST00000602492 DCAF11Q8TEB1 546 aa29.66■■■□□ 2.34
PPFIA3-204ENST00000602492 ZRANB1Q9UGI0 708 aa29.66■■■□□ 2.34
PPFIA3-204ENST00000602492 MINK1Q8N4C8 1332 aaPredicted RBP29.65■■■□□ 2.34
PPFIA3-204ENST00000602492 ABCA3Q99758 1704 aa29.65■■■□□ 2.34
PPFIA3-204ENST00000602492 STAC3Q96MF2 364 aa29.64■■■□□ 2.34
PPFIA3-204ENST00000602492 PLCH1Q4KWH8 1693 aa29.63■■■□□ 2.33
PPFIA3-204ENST00000602492 NWD2Q9ULI1 1742 aa29.63■■■□□ 2.33
PPFIA3-204ENST00000602492 CCDC9Q9Y3X0 531 aaKnown RBP29.63■■■□□ 2.33
PPFIA3-204ENST00000602492 GPRASP1Q5JY77 1395 aa29.62■■■□□ 2.33
PPFIA3-204ENST00000602492 SEPT12Q8IYM1 358 aa29.61■■■□□ 2.33
PPFIA3-204ENST00000602492 PRR36Q9H6K5 1346 aa29.6■■■□□ 2.33
PPFIA3-204ENST00000602492 BLMP54132 1417 aaPredicted RBP29.6■■■□□ 2.33
PPFIA3-204ENST00000602492 TULP4Q9NRJ4 1543 aa29.6■■■□□ 2.33
PPFIA3-204ENST00000602492 WASLO00401 505 aaPredicted RBP29.59■■■□□ 2.33
PPFIA3-204ENST00000602492 FAM83GA6ND36 823 aa29.58■■■□□ 2.33
PPFIA3-204ENST00000602492 HRCP23327 699 aa29.58■■■□□ 2.33
PPFIA3-204ENST00000602492 TRPM3Q9HCF6 1732 aaPredicted RBP29.58■■■□□ 2.33
PPFIA3-204ENST00000602492 BRWD3Q6RI45 1802 aa29.57■■■□□ 2.32
PPFIA3-204ENST00000602492 ONECUT3O60422 494 aaPredicted RBP29.55■■■□□ 2.32
PPFIA3-204ENST00000602492 NGDNQ8NEJ9 315 aaKnown RBP29.54■■■□□ 2.32
PPFIA3-204ENST00000602492 ALS2Q96Q42 1657 aa29.53■■■□□ 2.32
PPFIA3-204ENST00000602492 SF3B2Q13435 895 aaKnown RBP29.52■■■□□ 2.32
PPFIA3-204ENST00000602492 KRT27Q7Z3Y8 459 aa29.52■■■□□ 2.32
PPFIA3-204ENST00000602492 BTG4Q9NY30 223 aa29.51■■■□□ 2.31
PPFIA3-204ENST00000602492 A0A0G2JS52 829 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms