RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 COL22A1Q8NFW1 1626 aaPredicted RBP20.19■□□□□ 0.82
SUPT5H-220ENST00000601978 SLC4A1APQ9BWU0 796 aaKnown RBP20.18■□□□□ 0.82
SUPT5H-220ENST00000601978 ATRNO75882 1429 aa20.18■□□□□ 0.82
SUPT5H-220ENST00000601978 MYOM2P54296 1465 aa20.18■□□□□ 0.82
SUPT5H-220ENST00000601978 PPLO60437 1756 aa20.17■□□□□ 0.82
SUPT5H-220ENST00000601978 CDC42BPGQ6DT37 1551 aa20.16■□□□□ 0.82
SUPT5H-220ENST00000601978 ESCO1Q5FWF5 840 aa20.15■□□□□ 0.82
SUPT5H-220ENST00000601978 PXDNQ92626 1479 aa20.14■□□□□ 0.81
SUPT5H-220ENST00000601978 BCL9LQ86UU0 1499 aa20.12■□□□□ 0.81
SUPT5H-220ENST00000601978 TECPR2O15040 1411 aa20.12■□□□□ 0.81
SUPT5H-220ENST00000601978 LRPPRCP42704 1394 aaKnown RBP20.12■□□□□ 0.81
SUPT5H-220ENST00000601978 ADGRF5Q8IZF2 1346 aa20.11■□□□□ 0.81
SUPT5H-220ENST00000601978 FOXO3O43524 673 aa20.11■□□□□ 0.81
SUPT5H-220ENST00000601978 FOXD1Q16676 465 aa20.1■□□□□ 0.81
SUPT5H-220ENST00000601978 CCDC125Q86Z20 511 aa20.1■□□□□ 0.81
SUPT5H-220ENST00000601978 ABCC11Q96J66 1382 aa20.09■□□□□ 0.81
SUPT5H-220ENST00000601978 ANKRD30BQ9BXX2 1392 aa20.08■□□□□ 0.81
SUPT5H-220ENST00000601978 WAPLQ7Z5K2 1190 aa20.08■□□□□ 0.81
SUPT5H-220ENST00000601978 GJD4Q96KN9 370 aaPredicted RBP20.08■□□□□ 0.81
SUPT5H-220ENST00000601978 CCDC144AA2RUR9 1427 aa20.07■□□□□ 0.8
SUPT5H-220ENST00000601978 SPATA31E1Q6ZUB1 1445 aa20.07■□□□□ 0.8
SUPT5H-220ENST00000601978 MARF1Q9Y4F3 1742 aaKnown RBP20.07■□□□□ 0.8
SUPT5H-220ENST00000601978 XPCQ01831 940 aaPredicted RBP20.06■□□□□ 0.8
SUPT5H-220ENST00000601978 STK26Q9P289 416 aa20.06■□□□□ 0.8
SUPT5H-220ENST00000601978 ZRANB1Q9UGI0 708 aa20.06■□□□□ 0.8
SUPT5H-220ENST00000601978 RGL3Q3MIN7 710 aa20.04■□□□□ 0.8
SUPT5H-220ENST00000601978 SIRT1Q96EB6 747 aa20.04■□□□□ 0.8
SUPT5H-220ENST00000601978 SPATA31A3Q5VYP0 1347 aa20.03■□□□□ 0.8
SUPT5H-220ENST00000601978 TMEM132EQ6IEE7 984 aa20.03■□□□□ 0.8
SUPT5H-220ENST00000601978 UNC5CLQ8IV45 518 aa20.03■□□□□ 0.8
SUPT5H-220ENST00000601978 SLIT2O94813 1529 aa20.02■□□□□ 0.8
SUPT5H-220ENST00000601978 NUTM2FA1L443 756 aa20.02■□□□□ 0.8
SUPT5H-220ENST00000601978 PLEKHH1Q9ULM0 1364 aa20.02■□□□□ 0.8
SUPT5H-220ENST00000601978 KNDC1Q76NI1 1749 aa20.02■□□□□ 0.79
SUPT5H-220ENST00000601978 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.02■□□□□ 0.79
SUPT5H-220ENST00000601978 PIK3C2GO75747 1445 aa20.02■□□□□ 0.79
SUPT5H-220ENST00000601978 IFT172Q9UG01 1749 aa20■□□□□ 0.79
SUPT5H-220ENST00000601978 MPHOSPH9Q99550 1183 aa20■□□□□ 0.79
SUPT5H-220ENST00000601978 YTHDC2Q9H6S0 1430 aaKnown RBP20■□□□□ 0.79
SUPT5H-220ENST00000601978 KRT28Q7Z3Y7 464 aa19.99■□□□□ 0.79
SUPT5H-220ENST00000601978 KIF1AQ12756 1690 aa19.99■□□□□ 0.79
SUPT5H-220ENST00000601978 FMN2Q9NZ56 1722 aa19.99■□□□□ 0.79
SUPT5H-220ENST00000601978 RALGAPBQ86X10 1494 aa19.99■□□□□ 0.79
SUPT5H-220ENST00000601978 C14orf93Q9H972 538 aaKnown RBP19.97■□□□□ 0.79
SUPT5H-220ENST00000601978 GLI3P10071 1580 aa19.96■□□□□ 0.79
SUPT5H-220ENST00000601978 SRCAPQ6ZRS2 3230 aa19.96■□□□□ 0.79
SUPT5H-220ENST00000601978 EP400Q96L91 3159 aa19.95■□□□□ 0.78
SUPT5H-220ENST00000601978 BLMP54132 1417 aaPredicted RBP19.95■□□□□ 0.78
SUPT5H-220ENST00000601978 PSME1Q06323 249 aa19.95■□□□□ 0.78
SUPT5H-220ENST00000601978 PHF8Q9UPP1 1060 aa19.95■□□□□ 0.78
SUPT5H-220ENST00000601978 USP32Q8NFA0 1604 aa19.94■□□□□ 0.78
SUPT5H-220ENST00000601978 SBNO1A3KN83 1393 aa19.94■□□□□ 0.78
SUPT5H-220ENST00000601978 TNS3Q68CZ2 1445 aa19.93■□□□□ 0.78
SUPT5H-220ENST00000601978 ONECUT3O60422 494 aaPredicted RBP19.93■□□□□ 0.78
SUPT5H-220ENST00000601978 VPS72Q15906 364 aa19.93■□□□□ 0.78
SUPT5H-220ENST00000601978 ACIN1Q9UKV3 1341 aaKnown RBP19.93■□□□□ 0.78
SUPT5H-220ENST00000601978 DHX57Q6P158 1386 aaKnown RBP19.92■□□□□ 0.78
SUPT5H-220ENST00000601978 NRXN1Q9ULB1 1477 aa19.92■□□□□ 0.78
SUPT5H-220ENST00000601978 HAP1P54257 671 aaPredicted RBP19.9■□□□□ 0.78
SUPT5H-220ENST00000601978 SEPT12Q8IYM1 358 aa19.9■□□□□ 0.78
SUPT5H-220ENST00000601978 ARHGEF10O15013 1369 aa19.89■□□□□ 0.77
SUPT5H-220ENST00000601978 CFAP70Q5T0N1 1121 aa19.89■□□□□ 0.77
SUPT5H-220ENST00000601978 BRWD3Q6RI45 1802 aa19.88■□□□□ 0.77
SUPT5H-220ENST00000601978 RGPD8O14715 1765 aaPredicted RBP19.88■□□□□ 0.77
SUPT5H-220ENST00000601978 NWD2Q9ULI1 1742 aa19.88■□□□□ 0.77
SUPT5H-220ENST00000601978 CABLES1Q8TDN4 633 aa19.88■□□□□ 0.77
SUPT5H-220ENST00000601978 PRAM1Q96QH2 718 aa19.87■□□□□ 0.77
SUPT5H-220ENST00000601978 ANKARQ7Z5J8 1434 aa19.86■□□□□ 0.77
SUPT5H-220ENST00000601978 SF3B2Q13435 895 aaKnown RBP19.86■□□□□ 0.77
SUPT5H-220ENST00000601978 DEFB132Q7Z7B7 95 aa19.86■□□□□ 0.77
SUPT5H-220ENST00000601978 FAM83GA6ND36 823 aa19.85■□□□□ 0.77
SUPT5H-220ENST00000601978 DLC1Q96QB1 1528 aa19.85■□□□□ 0.77
SUPT5H-220ENST00000601978 KRT27Q7Z3Y8 459 aa19.84■□□□□ 0.77
SUPT5H-220ENST00000601978 SAFB2Q14151 953 aaKnown RBP eCLIP19.83■□□□□ 0.77
SUPT5H-220ENST00000601978 LMOD2Q6P5Q4 547 aa19.83■□□□□ 0.77
SUPT5H-220ENST00000601978 CCDC9Q9Y3X0 531 aaKnown RBP19.83■□□□□ 0.77
SUPT5H-220ENST00000601978 PLCH1Q4KWH8 1693 aa19.83■□□□□ 0.76
SUPT5H-220ENST00000601978 POGKQ9P215 609 aa19.82■□□□□ 0.76
SUPT5H-220ENST00000601978 ABCA3Q99758 1704 aa19.82■□□□□ 0.76
SUPT5H-220ENST00000601978 PMFBP1Q8TBY8 1022 aa19.81■□□□□ 0.76
SUPT5H-220ENST00000601978 ADGRB2O60241 1585 aa19.8■□□□□ 0.76
SUPT5H-220ENST00000601978 PLEKHG5O94827 1062 aa19.78■□□□□ 0.76
SUPT5H-220ENST00000601978 EIF3AQ14152 1382 aaKnown RBP19.77■□□□□ 0.76
SUPT5H-220ENST00000601978 GPRASP1Q5JY77 1395 aa19.77■□□□□ 0.76
SUPT5H-220ENST00000601978 ADGRB1O14514 1584 aa19.77■□□□□ 0.76
SUPT5H-220ENST00000601978 TRPM3Q9HCF6 1732 aaPredicted RBP19.76■□□□□ 0.75
SUPT5H-220ENST00000601978 BAG6P46379 1132 aa19.76■□□□□ 0.75
SUPT5H-220ENST00000601978 BTG4Q9NY30 223 aa19.76■□□□□ 0.75
SUPT5H-220ENST00000601978 FAM98CQ17RN3 349 aaKnown RBP19.75■□□□□ 0.75
SUPT5H-220ENST00000601978 TRAK1Q9UPV9 953 aa19.75■□□□□ 0.75
SUPT5H-220ENST00000601978 NRAPQ86VF7 1730 aa19.75■□□□□ 0.75
SUPT5H-220ENST00000601978 PRR36Q9H6K5 1346 aa19.75■□□□□ 0.75
SUPT5H-220ENST00000601978 ALS2Q96Q42 1657 aa19.75■□□□□ 0.75
SUPT5H-220ENST00000601978 LRP5O75197 1615 aa19.74■□□□□ 0.75
SUPT5H-220ENST00000601978 STAC3Q96MF2 364 aa19.74■□□□□ 0.75
SUPT5H-220ENST00000601978 COL14A1Q05707 1796 aaKnown RBP19.73■□□□□ 0.75
SUPT5H-220ENST00000601978 WASLO00401 505 aaPredicted RBP19.73■□□□□ 0.75
SUPT5H-220ENST00000601978 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
SUPT5H-220ENST00000601978 SPATA31A5Q5VU36 1347 aa19.73■□□□□ 0.75
SUPT5H-220ENST00000601978 SPATA31A7Q8IWB4 1347 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms