RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 KDM2AQ9Y2K7 1162 aa25.53■■□□□ 1.68
IRF3-230ENST00000601809 DISP3Q9P2K9 1392 aa25.52■■□□□ 1.68
IRF3-230ENST00000601809 KIAA1210Q9ULL0 1709 aa25.51■■□□□ 1.67
IRF3-230ENST00000601809 FMN2Q9NZ56 1722 aa25.48■■□□□ 1.67
IRF3-230ENST00000601809 SIN3AQ96ST3 1273 aa25.46■■□□□ 1.67
IRF3-230ENST00000601809 SHPRHQ149N8 1683 aa25.45■■□□□ 1.67
IRF3-230ENST00000601809 ADGRB2O60241 1585 aa25.44■■□□□ 1.66
IRF3-230ENST00000601809 ARHGEF28Q8N1W1 1705 aaKnown RBP25.44■■□□□ 1.66
IRF3-230ENST00000601809 JCADQ9P266 1359 aa25.44■■□□□ 1.66
IRF3-230ENST00000601809 ORAI2Q96SN7 254 aa25.42■■□□□ 1.66
IRF3-230ENST00000601809 L3MBTL2Q969R5 705 aa25.41■■□□□ 1.66
IRF3-230ENST00000601809 PRAM1Q96QH2 718 aa25.41■■□□□ 1.66
IRF3-230ENST00000601809 ILDR2Q71H61 639 aa25.39■■□□□ 1.66
IRF3-230ENST00000601809 DDX17Q92841 729 aaKnown RBP25.39■■□□□ 1.66
IRF3-230ENST00000601809 TRAK1Q9UPV9 953 aa25.37■■□□□ 1.65
IRF3-230ENST00000601809 USP32Q8NFA0 1604 aa25.37■■□□□ 1.65
IRF3-230ENST00000601809 LRP6O75581 1613 aa25.36■■□□□ 1.65
IRF3-230ENST00000601809 RGPD8O14715 1765 aaPredicted RBP25.36■■□□□ 1.65
IRF3-230ENST00000601809 SOS2Q07890 1332 aaPredicted RBP25.36■■□□□ 1.65
IRF3-230ENST00000601809 TRPM1Q7Z4N2 1603 aa25.34■■□□□ 1.65
IRF3-230ENST00000601809 NBPF1Q3BBV0 1214 aa25.34■■□□□ 1.65
IRF3-230ENST00000601809 PXDNQ92626 1479 aa25.33■■□□□ 1.65
IRF3-230ENST00000601809 RGS17Q9UGC6 210 aaPredicted RBP25.32■■□□□ 1.64
IRF3-230ENST00000601809 KIF1AQ12756 1690 aa25.32■■□□□ 1.64
IRF3-230ENST00000601809 SPATA31A6Q5VVP1 1343 aa25.32■■□□□ 1.64
IRF3-230ENST00000601809 NEUROD1Q13562 356 aa25.31■■□□□ 1.64
IRF3-230ENST00000601809 SAFB2Q14151 953 aaKnown RBP eCLIP25.31■■□□□ 1.64
IRF3-230ENST00000601809 POGKQ9P215 609 aa25.3■■□□□ 1.64
IRF3-230ENST00000601809 PNPLA6Q8IY17 1366 aa25.3■■□□□ 1.64
IRF3-230ENST00000601809 NUTM2FA1L443 756 aa25.29■■□□□ 1.64
IRF3-230ENST00000601809 ESCO1Q5FWF5 840 aa25.29■■□□□ 1.64
IRF3-230ENST00000601809 ANKARQ7Z5J8 1434 aa25.29■■□□□ 1.64
IRF3-230ENST00000601809 LRRC59Q96AG4 307 aaKnown RBP25.28■■□□□ 1.64
IRF3-230ENST00000601809 COL22A1Q8NFW1 1626 aaPredicted RBP25.26■■□□□ 1.63
IRF3-230ENST00000601809 TULP4Q9NRJ4 1543 aa25.26■■□□□ 1.63
IRF3-230ENST00000601809 NPHP3Q7Z494 1330 aa25.25■■□□□ 1.63
IRF3-230ENST00000601809 MINK1Q8N4C8 1332 aaPredicted RBP25.24■■□□□ 1.63
IRF3-230ENST00000601809 PRR36Q9H6K5 1346 aa25.24■■□□□ 1.63
IRF3-230ENST00000601809 NBPF8Q3BBV2 869 aa25.23■■□□□ 1.63
IRF3-230ENST00000601809 HIRIP3Q9BW71 556 aaPredicted RBP25.23■■□□□ 1.63
IRF3-230ENST00000601809 WASLO00401 505 aaPredicted RBP25.22■■□□□ 1.63
IRF3-230ENST00000601809 FOXO3O43524 673 aa25.22■■□□□ 1.63
IRF3-230ENST00000601809 PHF23Q9BUL5 403 aaPredicted RBP25.21■■□□□ 1.63
IRF3-230ENST00000601809 GPRASP1Q5JY77 1395 aa25.2■■□□□ 1.63
IRF3-230ENST00000601809 ATP7BP35670 1465 aa25.2■■□□□ 1.62
IRF3-230ENST00000601809 PHF8Q9UPP1 1060 aa25.18■■□□□ 1.62
IRF3-230ENST00000601809 EIF3AQ14152 1382 aaKnown RBP25.18■■□□□ 1.62
IRF3-230ENST00000601809 TOPAZ1Q8N9V7 1692 aa25.17■■□□□ 1.62
IRF3-230ENST00000601809 QRICH2Q9H0J4 1663 aa25.17■■□□□ 1.62
IRF3-230ENST00000601809 XPCQ01831 940 aaPredicted RBP25.16■■□□□ 1.62
IRF3-230ENST00000601809 TRPM3Q9HCF6 1732 aaPredicted RBP25.15■■□□□ 1.62
IRF3-230ENST00000601809 ITSN1Q15811 1721 aa25.15■■□□□ 1.62
IRF3-230ENST00000601809 POTEAQ6S8J7 498 aa25.14■■□□□ 1.62
IRF3-230ENST00000601809 TONSLQ96HA7 1378 aa25.14■■□□□ 1.61
IRF3-230ENST00000601809 RALGAPBQ86X10 1494 aa25.14■■□□□ 1.61
IRF3-230ENST00000601809 SPATA31A3Q5VYP0 1347 aa25.12■■□□□ 1.61
IRF3-230ENST00000601809 CENPJQ9HC77 1338 aaPredicted RBP25.12■■□□□ 1.61
IRF3-230ENST00000601809 PCGF6Q9BYE7 350 aa25.12■■□□□ 1.61
IRF3-230ENST00000601809 ROCK2O75116 1388 aaKnown RBP25.12■■□□□ 1.61
IRF3-230ENST00000601809 NUTM2BA6NNL0 878 aaPredicted RBP25.11■■□□□ 1.61
IRF3-230ENST00000601809 NUTM2EB1AL46 878 aaPredicted RBP25.11■■□□□ 1.61
IRF3-230ENST00000601809 KRT28Q7Z3Y7 464 aa25.11■■□□□ 1.61
IRF3-230ENST00000601809 NUTM2AQ8IVF1 878 aaPredicted RBP25.11■■□□□ 1.61
IRF3-230ENST00000601809 SBNO1A3KN83 1393 aa25.1■■□□□ 1.61
IRF3-230ENST00000601809 CDK19Q9BWU1 502 aa25.1■■□□□ 1.61
IRF3-230ENST00000601809 PMFBP1Q8TBY8 1022 aa25.09■■□□□ 1.61
IRF3-230ENST00000601809 ALS2Q96Q42 1657 aa25.09■■□□□ 1.61
IRF3-230ENST00000601809 TNS3Q68CZ2 1445 aa25.09■■□□□ 1.61
IRF3-230ENST00000601809 MARF1Q9Y4F3 1742 aaKnown RBP25.09■■□□□ 1.61
IRF3-230ENST00000601809 NUDT16Q96DE0 195 aaKnown RBP25.08■■□□□ 1.61
IRF3-230ENST00000601809 ABCA3Q99758 1704 aa25.06■■□□□ 1.6
IRF3-230ENST00000601809 SOCS7O14512 581 aa25.06■■□□□ 1.6
IRF3-230ENST00000601809 MEX3CQ5U5Q3 659 aaKnown RBP25.05■■□□□ 1.6
IRF3-230ENST00000601809 CLSPNQ9HAW4 1339 aa25.05■■□□□ 1.6
IRF3-230ENST00000601809 POLR3AO14802 1390 aaPredicted RBP25.04■■□□□ 1.6
IRF3-230ENST00000601809 PSME1Q06323 249 aa25.02■■□□□ 1.6
IRF3-230ENST00000601809 CRYBG1Q9Y4K1 1723 aa25.02■■□□□ 1.6
IRF3-230ENST00000601809 PLEKHG3A1L390 1219 aa25.01■■□□□ 1.59
IRF3-230ENST00000601809 AFF2P51816 1311 aa25.01■■□□□ 1.59
IRF3-230ENST00000601809 SBNO2Q9Y2G9 1366 aa25.01■■□□□ 1.59
IRF3-230ENST00000601809 ZNF772Q68DY9 489 aaPredicted RBP25■■□□□ 1.59
IRF3-230ENST00000601809 CCDC61Q9Y6R9 512 aa25■■□□□ 1.59
IRF3-230ENST00000601809 ADAMTS2O95450 1211 aa24.99■■□□□ 1.59
IRF3-230ENST00000601809 ARHGEF10O15013 1369 aa24.98■■□□□ 1.59
IRF3-230ENST00000601809 C8orf37Q96NL8 207 aa24.98■■□□□ 1.59
IRF3-230ENST00000601809 FNBP4Q8N3X1 1017 aaPredicted RBP24.97■■□□□ 1.59
IRF3-230ENST00000601809 CARD11Q9BXL7 1154 aa24.97■■□□□ 1.59
IRF3-230ENST00000601809 CABP2Q9NPB3 220 aa24.97■■□□□ 1.59
IRF3-230ENST00000601809 ACEP12821 1306 aa24.95■■□□□ 1.58
IRF3-230ENST00000601809 NGDNQ8NEJ9 315 aaKnown RBP24.95■■□□□ 1.58
IRF3-230ENST00000601809 PPIP5K1Q6PFW1 1433 aa24.95■■□□□ 1.58
IRF3-230ENST00000601809 SRPK2P78362 688 aaKnown RBP24.93■■□□□ 1.58
IRF3-230ENST00000601809 TIMELESSQ9UNS1 1208 aa24.93■■□□□ 1.58
IRF3-230ENST00000601809 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.92■■□□□ 1.58
IRF3-230ENST00000601809 SLIT2O94813 1529 aa24.92■■□□□ 1.58
IRF3-230ENST00000601809 EVC2Q86UK5 1308 aa24.92■■□□□ 1.58
IRF3-230ENST00000601809 BCL9LQ86UU0 1499 aa24.92■■□□□ 1.58
IRF3-230ENST00000601809 CABLES1Q8TDN4 633 aa24.91■■□□□ 1.58
IRF3-230ENST00000601809 NGLY1Q96IV0 654 aa24.91■■□□□ 1.58
IRF3-230ENST00000601809 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms