RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 NEUROD1Q13562 356 aa19.48■□□□□ 0.71
ARHGEF1-222ENST00000600517 JCADQ9P266 1359 aa19.47■□□□□ 0.71
ARHGEF1-222ENST00000600517 POGKQ9P215 609 aa19.47■□□□□ 0.71
ARHGEF1-222ENST00000600517 TRAK1Q9UPV9 953 aa19.47■□□□□ 0.71
ARHGEF1-222ENST00000600517 DLC1Q96QB1 1528 aa19.46■□□□□ 0.71
ARHGEF1-222ENST00000600517 PHLPP1O60346 1717 aa19.46■□□□□ 0.71
ARHGEF1-222ENST00000600517 MED1Q15648 1581 aaPredicted RBP19.46■□□□□ 0.71
ARHGEF1-222ENST00000600517 CDC42BPGQ6DT37 1551 aa19.46■□□□□ 0.71
ARHGEF1-222ENST00000600517 COL16A1Q07092 1604 aaPredicted RBP19.45■□□□□ 0.7
ARHGEF1-222ENST00000600517 SAFB2Q14151 953 aaKnown RBP eCLIP19.43■□□□□ 0.7
ARHGEF1-222ENST00000600517 ESCO1Q5FWF5 840 aa19.43■□□□□ 0.7
ARHGEF1-222ENST00000600517 DDX17Q92841 729 aaKnown RBP19.43■□□□□ 0.7
ARHGEF1-222ENST00000600517 LRRC59Q96AG4 307 aaKnown RBP19.43■□□□□ 0.7
ARHGEF1-222ENST00000600517 NUTM2FA1L443 756 aa19.42■□□□□ 0.7
ARHGEF1-222ENST00000600517 NBPF1Q3BBV0 1214 aa19.42■□□□□ 0.7
ARHGEF1-222ENST00000600517 ILDR2Q71H61 639 aa19.4■□□□□ 0.7
ARHGEF1-222ENST00000600517 SOS2Q07890 1332 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF1-222ENST00000600517 SPATA31A6Q5VVP1 1343 aa19.4■□□□□ 0.7
ARHGEF1-222ENST00000600517 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
ARHGEF1-222ENST00000600517 NHSL1Q5SYE7 1610 aa19.39■□□□□ 0.69
ARHGEF1-222ENST00000600517 KIAA1210Q9ULL0 1709 aa19.37■□□□□ 0.69
ARHGEF1-222ENST00000600517 FOXO3O43524 673 aa19.37■□□□□ 0.69
ARHGEF1-222ENST00000600517 NPHP3Q7Z494 1330 aa19.36■□□□□ 0.69
ARHGEF1-222ENST00000600517 MINK1Q8N4C8 1332 aaPredicted RBP19.36■□□□□ 0.69
ARHGEF1-222ENST00000600517 HIRIP3Q9BW71 556 aaPredicted RBP19.36■□□□□ 0.69
ARHGEF1-222ENST00000600517 FMN2Q9NZ56 1722 aa19.35■□□□□ 0.69
ARHGEF1-222ENST00000600517 WASLO00401 505 aaPredicted RBP19.34■□□□□ 0.69
ARHGEF1-222ENST00000600517 RGS17Q9UGC6 210 aaPredicted RBP19.34■□□□□ 0.69
ARHGEF1-222ENST00000600517 PCGF6Q9BYE7 350 aa19.33■□□□□ 0.68
ARHGEF1-222ENST00000600517 PHF8Q9UPP1 1060 aa19.33■□□□□ 0.68
ARHGEF1-222ENST00000600517 SHPRHQ149N8 1683 aa19.33■□□□□ 0.68
ARHGEF1-222ENST00000600517 ANKARQ7Z5J8 1434 aa19.33■□□□□ 0.68
ARHGEF1-222ENST00000600517 PNPLA6Q8IY17 1366 aa19.32■□□□□ 0.68
ARHGEF1-222ENST00000600517 ADGRB2O60241 1585 aa19.32■□□□□ 0.68
ARHGEF1-222ENST00000600517 NBPF8Q3BBV2 869 aa19.31■□□□□ 0.68
ARHGEF1-222ENST00000600517 LRP6O75581 1613 aa19.3■□□□□ 0.68
ARHGEF1-222ENST00000600517 NUTM2BA6NNL0 878 aaPredicted RBP19.3■□□□□ 0.68
ARHGEF1-222ENST00000600517 NUTM2EB1AL46 878 aaPredicted RBP19.3■□□□□ 0.68
ARHGEF1-222ENST00000600517 NUTM2AQ8IVF1 878 aaPredicted RBP19.3■□□□□ 0.68
ARHGEF1-222ENST00000600517 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
ARHGEF1-222ENST00000600517 TONSLQ96HA7 1378 aa19.3■□□□□ 0.68
ARHGEF1-222ENST00000600517 PXDNQ92626 1479 aa19.29■□□□□ 0.68
ARHGEF1-222ENST00000600517 XPCQ01831 940 aaPredicted RBP19.29■□□□□ 0.68
ARHGEF1-222ENST00000600517 ARHGEF28Q8N1W1 1705 aaKnown RBP19.28■□□□□ 0.68
ARHGEF1-222ENST00000600517 PRR36Q9H6K5 1346 aa19.28■□□□□ 0.68
ARHGEF1-222ENST00000600517 KRT28Q7Z3Y7 464 aa19.28■□□□□ 0.68
ARHGEF1-222ENST00000600517 CENPJQ9HC77 1338 aaPredicted RBP19.27■□□□□ 0.68
ARHGEF1-222ENST00000600517 MEX3CQ5U5Q3 659 aaKnown RBP19.27■□□□□ 0.68
ARHGEF1-222ENST00000600517 CDK19Q9BWU1 502 aa19.27■□□□□ 0.68
ARHGEF1-222ENST00000600517 PSME1Q06323 249 aa19.26■□□□□ 0.67
ARHGEF1-222ENST00000600517 PMFBP1Q8TBY8 1022 aa19.26■□□□□ 0.67
ARHGEF1-222ENST00000600517 ROCK2O75116 1388 aaKnown RBP19.26■□□□□ 0.67
ARHGEF1-222ENST00000600517 KIF1AQ12756 1690 aa19.25■□□□□ 0.67
ARHGEF1-222ENST00000600517 NUDT16Q96DE0 195 aaKnown RBP19.25■□□□□ 0.67
ARHGEF1-222ENST00000600517 TRPM1Q7Z4N2 1603 aa19.25■□□□□ 0.67
ARHGEF1-222ENST00000600517 USP32Q8NFA0 1604 aa19.25■□□□□ 0.67
ARHGEF1-222ENST00000600517 TULP4Q9NRJ4 1543 aa19.25■□□□□ 0.67
ARHGEF1-222ENST00000600517 SPATA31A3Q5VYP0 1347 aa19.25■□□□□ 0.67
ARHGEF1-222ENST00000600517 POTEAQ6S8J7 498 aa19.24■□□□□ 0.67
ARHGEF1-222ENST00000600517 GPRASP1Q5JY77 1395 aa19.23■□□□□ 0.67
ARHGEF1-222ENST00000600517 RGPD8O14715 1765 aaPredicted RBP19.22■□□□□ 0.67
ARHGEF1-222ENST00000600517 CLSPNQ9HAW4 1339 aa19.22■□□□□ 0.67
ARHGEF1-222ENST00000600517 SOCS7O14512 581 aa19.21■□□□□ 0.67
ARHGEF1-222ENST00000600517 SBNO1A3KN83 1393 aa19.2■□□□□ 0.66
ARHGEF1-222ENST00000600517 ZNF772Q68DY9 489 aaPredicted RBP19.2■□□□□ 0.66
ARHGEF1-222ENST00000600517 CCDC61Q9Y6R9 512 aa19.2■□□□□ 0.66
ARHGEF1-222ENST00000600517 ADAMTS2O95450 1211 aa19.19■□□□□ 0.66
ARHGEF1-222ENST00000600517 NGDNQ8NEJ9 315 aaKnown RBP19.19■□□□□ 0.66
ARHGEF1-222ENST00000600517 CARD11Q9BXL7 1154 aa19.19■□□□□ 0.66
ARHGEF1-222ENST00000600517 ATP7BP35670 1465 aa19.19■□□□□ 0.66
ARHGEF1-222ENST00000600517 COL22A1Q8NFW1 1626 aaPredicted RBP19.18■□□□□ 0.66
ARHGEF1-222ENST00000600517 PLEKHG3A1L390 1219 aa19.18■□□□□ 0.66
ARHGEF1-222ENST00000600517 TIMELESSQ9UNS1 1208 aa19.18■□□□□ 0.66
ARHGEF1-222ENST00000600517 SRPK2P78362 688 aaKnown RBP19.17■□□□□ 0.66
ARHGEF1-222ENST00000600517 C8orf37Q96NL8 207 aa19.17■□□□□ 0.66
ARHGEF1-222ENST00000600517 AFF2P51816 1311 aa19.17■□□□□ 0.66
ARHGEF1-222ENST00000600517 TNS3Q68CZ2 1445 aa19.17■□□□□ 0.66
ARHGEF1-222ENST00000600517 RALGAPBQ86X10 1494 aa19.16■□□□□ 0.66
ARHGEF1-222ENST00000600517 NGLY1Q96IV0 654 aa19.16■□□□□ 0.66
ARHGEF1-222ENST00000600517 CABP2Q9NPB3 220 aa19.16■□□□□ 0.66
ARHGEF1-222ENST00000600517 EVC2Q86UK5 1308 aa19.15■□□□□ 0.66
ARHGEF1-222ENST00000600517 POLR3AO14802 1390 aaPredicted RBP19.14■□□□□ 0.65
ARHGEF1-222ENST00000600517 ARHGEF10O15013 1369 aa19.14■□□□□ 0.65
ARHGEF1-222ENST00000600517 LMOD2Q6P5Q4 547 aa19.13■□□□□ 0.65
ARHGEF1-222ENST00000600517 FNBP4Q8N3X1 1017 aaPredicted RBP19.13■□□□□ 0.65
ARHGEF1-222ENST00000600517 ACEP12821 1306 aa19.13■□□□□ 0.65
ARHGEF1-222ENST00000600517 QRICH2Q9H0J4 1663 aa19.11■□□□□ 0.65
ARHGEF1-222ENST00000600517 CABLES1Q8TDN4 633 aa19.11■□□□□ 0.65
ARHGEF1-222ENST00000600517 CCER1Q8TC90 406 aaPredicted RBP19.1■□□□□ 0.65
ARHGEF1-222ENST00000600517 QTRT2Q9H974 415 aaKnown RBP19.1■□□□□ 0.65
ARHGEF1-222ENST00000600517 CABP1Q9NZU7 370 aa19.1■□□□□ 0.65
ARHGEF1-222ENST00000600517 SBNO2Q9Y2G9 1366 aa19.09■□□□□ 0.65
ARHGEF1-222ENST00000600517 PAK3O75914 559 aaPredicted RBP19.09■□□□□ 0.65
ARHGEF1-222ENST00000600517 RXRBP28702 533 aa19.09■□□□□ 0.65
ARHGEF1-222ENST00000600517 PPIP5K1Q6PFW1 1433 aa19.08■□□□□ 0.65
ARHGEF1-222ENST00000600517 ITSN1Q15811 1721 aa19.08■□□□□ 0.65
ARHGEF1-222ENST00000600517 USP21Q9UK80 565 aa19.08■□□□□ 0.64
ARHGEF1-222ENST00000600517 TRPM3Q9HCF6 1732 aaPredicted RBP19.08■□□□□ 0.64
ARHGEF1-222ENST00000600517 TOPAZ1Q8N9V7 1692 aa19.08■□□□□ 0.64
ARHGEF1-222ENST00000600517 HAP1P54257 671 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms