RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 ADGRF5Q8IZF2 1346 aa25.71■■□□□ 1.71
SMG9-210ENST00000600097 ESCO1Q5FWF5 840 aa25.71■■□□□ 1.71
SMG9-210ENST00000600097 ANKRD30BQ9BXX2 1392 aa25.7■■□□□ 1.71
SMG9-210ENST00000600097 CDC42BPGQ6DT37 1551 aa25.7■■□□□ 1.71
SMG9-210ENST00000600097 USP21Q9UK80 565 aa25.7■■□□□ 1.7
SMG9-210ENST00000600097 RGL3Q3MIN7 710 aa25.69■■□□□ 1.7
SMG9-210ENST00000600097 FNBP4Q8N3X1 1017 aaPredicted RBP25.68■■□□□ 1.7
SMG9-210ENST00000600097 TRPC5Q9UL62 973 aaPredicted RBP25.68■■□□□ 1.7
SMG9-210ENST00000600097 TECPR2O15040 1411 aa25.67■■□□□ 1.7
SMG9-210ENST00000600097 SPATA31E1Q6ZUB1 1445 aa25.67■■□□□ 1.7
SMG9-210ENST00000600097 MPHOSPH9Q99550 1183 aa25.66■■□□□ 1.7
SMG9-210ENST00000600097 STK26Q9P289 416 aa25.66■■□□□ 1.7
SMG9-210ENST00000600097 LRPPRCP42704 1394 aaKnown RBP25.66■■□□□ 1.7
SMG9-210ENST00000600097 COL22A1Q8NFW1 1626 aaPredicted RBP25.65■■□□□ 1.7
SMG9-210ENST00000600097 ABCC11Q96J66 1382 aa25.65■■□□□ 1.7
SMG9-210ENST00000600097 FOXO3O43524 673 aa25.64■■□□□ 1.7
SMG9-210ENST00000600097 WAPLQ7Z5K2 1190 aa25.63■■□□□ 1.69
SMG9-210ENST00000600097 MYOM2P54296 1465 aa25.63■■□□□ 1.69
SMG9-210ENST00000600097 PXDNQ92626 1479 aa25.62■■□□□ 1.69
SMG9-210ENST00000600097 ATAD2Q6PL18 1390 aa25.61■■□□□ 1.69
SMG9-210ENST00000600097 ACIN1Q9UKV3 1341 aaKnown RBP25.61■■□□□ 1.69
SMG9-210ENST00000600097 PIK3C2GO75747 1445 aa25.6■■□□□ 1.69
SMG9-210ENST00000600097 ATRNO75882 1429 aa25.6■■□□□ 1.69
SMG9-210ENST00000600097 TMEM132EQ6IEE7 984 aa25.59■■□□□ 1.69
SMG9-210ENST00000600097 NUTM2FA1L443 756 aa25.58■■□□□ 1.69
SMG9-210ENST00000600097 XPCQ01831 940 aaPredicted RBP25.58■■□□□ 1.69
SMG9-210ENST00000600097 IFT172Q9UG01 1749 aa25.57■■□□□ 1.68
SMG9-210ENST00000600097 SIRT1Q96EB6 747 aa25.56■■□□□ 1.68
SMG9-210ENST00000600097 PLEKHH1Q9ULM0 1364 aa25.56■■□□□ 1.68
SMG9-210ENST00000600097 YTHDC2Q9H6S0 1430 aaKnown RBP25.55■■□□□ 1.68
SMG9-210ENST00000600097 KNDC1Q76NI1 1749 aa25.54■■□□□ 1.68
SMG9-210ENST00000600097 BCL9LQ86UU0 1499 aa25.54■■□□□ 1.68
SMG9-210ENST00000600097 C14orf93Q9H972 538 aaKnown RBP25.52■■□□□ 1.68
SMG9-210ENST00000600097 SPATA31A3Q5VYP0 1347 aa25.51■■□□□ 1.67
SMG9-210ENST00000600097 GJD4Q96KN9 370 aaPredicted RBP25.5■■□□□ 1.67
SMG9-210ENST00000600097 FMN2Q9NZ56 1722 aa25.49■■□□□ 1.67
SMG9-210ENST00000600097 DHX57Q6P158 1386 aaKnown RBP25.48■■□□□ 1.67
SMG9-210ENST00000600097 KRT28Q7Z3Y7 464 aa25.48■■□□□ 1.67
SMG9-210ENST00000600097 KIF1AQ12756 1690 aa25.48■■□□□ 1.67
SMG9-210ENST00000600097 MARF1Q9Y4F3 1742 aaKnown RBP25.47■■□□□ 1.67
SMG9-210ENST00000600097 CCDC125Q86Z20 511 aa25.47■■□□□ 1.67
SMG9-210ENST00000600097 NRXN1Q9ULB1 1477 aa25.47■■□□□ 1.67
SMG9-210ENST00000600097 PSME1Q06323 249 aa25.45■■□□□ 1.66
SMG9-210ENST00000600097 CFAP70Q5T0N1 1121 aa25.45■■□□□ 1.66
SMG9-210ENST00000600097 UNC5CLQ8IV45 518 aa25.45■■□□□ 1.66
SMG9-210ENST00000600097 PHF8Q9UPP1 1060 aa25.45■■□□□ 1.66
SMG9-210ENST00000600097 SLIT2O94813 1529 aa25.42■■□□□ 1.66
SMG9-210ENST00000600097 TNS3Q68CZ2 1445 aa25.41■■□□□ 1.66
SMG9-210ENST00000600097 HAP1P54257 671 aaPredicted RBP25.41■■□□□ 1.66
SMG9-210ENST00000600097 PRAM1Q96QH2 718 aa25.41■■□□□ 1.66
SMG9-210ENST00000600097 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.4■■□□□ 1.66
SMG9-210ENST00000600097 ZRANB1Q9UGI0 708 aa25.39■■□□□ 1.66
SMG9-210ENST00000600097 SBNO1A3KN83 1393 aa25.38■■□□□ 1.65
SMG9-210ENST00000600097 RALGAPBQ86X10 1494 aa25.38■■□□□ 1.65
SMG9-210ENST00000600097 USP32Q8NFA0 1604 aa25.37■■□□□ 1.65
SMG9-210ENST00000600097 SAFB2Q14151 953 aaKnown RBP eCLIP25.37■■□□□ 1.65
SMG9-210ENST00000600097 POGKQ9P215 609 aa25.37■■□□□ 1.65
SMG9-210ENST00000600097 ARHGEF10O15013 1369 aa25.36■■□□□ 1.65
SMG9-210ENST00000600097 EP400Q96L91 3159 aa25.36■■□□□ 1.65
SMG9-210ENST00000600097 DLC1Q96QB1 1528 aa25.36■■□□□ 1.65
SMG9-210ENST00000600097 ANKARQ7Z5J8 1434 aa25.35■■□□□ 1.65
SMG9-210ENST00000600097 CABLES1Q8TDN4 633 aa25.34■■□□□ 1.65
SMG9-210ENST00000600097 GLI3P10071 1580 aa25.34■■□□□ 1.65
SMG9-210ENST00000600097 VPS72Q15906 364 aa25.33■■□□□ 1.65
SMG9-210ENST00000600097 LMOD2Q6P5Q4 547 aa25.33■■□□□ 1.65
SMG9-210ENST00000600097 RAB3GAP2Q9H2M9 1393 aa25.32■■□□□ 1.64
SMG9-210ENST00000600097 RGPD8O14715 1765 aaPredicted RBP25.31■■□□□ 1.64
SMG9-210ENST00000600097 BLMP54132 1417 aaPredicted RBP25.3■■□□□ 1.64
SMG9-210ENST00000600097 PMFBP1Q8TBY8 1022 aa25.3■■□□□ 1.64
SMG9-210ENST00000600097 SRCAPQ6ZRS2 3230 aa25.3■■□□□ 1.64
SMG9-210ENST00000600097 SEPT12Q8IYM1 358 aa25.29■■□□□ 1.64
SMG9-210ENST00000600097 EIF3AQ14152 1382 aaKnown RBP25.29■■□□□ 1.64
SMG9-210ENST00000600097 ADGRB1O14514 1584 aa25.28■■□□□ 1.64
SMG9-210ENST00000600097 ADGRB2O60241 1585 aa25.28■■□□□ 1.64
SMG9-210ENST00000600097 PLEKHG5O94827 1062 aa25.28■■□□□ 1.64
SMG9-210ENST00000600097 TRAK1Q9UPV9 953 aa25.28■■□□□ 1.64
SMG9-210ENST00000600097 ONECUT3O60422 494 aaPredicted RBP25.27■■□□□ 1.64
SMG9-210ENST00000600097 STAC3Q96MF2 364 aa25.27■■□□□ 1.64
SMG9-210ENST00000600097 CCDC9Q9Y3X0 531 aaKnown RBP25.27■■□□□ 1.64
SMG9-210ENST00000600097 NWD2Q9ULI1 1742 aa25.26■■□□□ 1.63
SMG9-210ENST00000600097 HIRIP3Q9BW71 556 aaPredicted RBP25.25■■□□□ 1.63
SMG9-210ENST00000600097 GPRASP1Q5JY77 1395 aa25.25■■□□□ 1.63
SMG9-210ENST00000600097 FAM83GA6ND36 823 aa25.24■■□□□ 1.63
SMG9-210ENST00000600097 SF3B2Q13435 895 aaKnown RBP25.24■■□□□ 1.63
SMG9-210ENST00000600097 DCAF11Q8TEB1 546 aa25.24■■□□□ 1.63
SMG9-210ENST00000600097 MINK1Q8N4C8 1332 aaPredicted RBP25.23■■□□□ 1.63
SMG9-210ENST00000600097 KDM2AQ9Y2K7 1162 aa25.23■■□□□ 1.63
SMG9-210ENST00000600097 PLCH1Q4KWH8 1693 aa25.23■■□□□ 1.63
SMG9-210ENST00000600097 ABCA3Q99758 1704 aa25.21■■□□□ 1.63
SMG9-210ENST00000600097 WASLO00401 505 aaPredicted RBP25.21■■□□□ 1.63
SMG9-210ENST00000600097 KRT27Q7Z3Y8 459 aa25.21■■□□□ 1.63
SMG9-210ENST00000600097 PRR36Q9H6K5 1346 aa25.2■■□□□ 1.62
SMG9-210ENST00000600097 TULP4Q9NRJ4 1543 aa25.2■■□□□ 1.62
SMG9-210ENST00000600097 BRWD3Q6RI45 1802 aa25.19■■□□□ 1.62
SMG9-210ENST00000600097 DEFB132Q7Z7B7 95 aa25.18■■□□□ 1.62
SMG9-210ENST00000600097 BTG4Q9NY30 223 aa25.18■■□□□ 1.62
SMG9-210ENST00000600097 HRCP23327 699 aa25.17■■□□□ 1.62
SMG9-210ENST00000600097 NGDNQ8NEJ9 315 aaKnown RBP25.17■■□□□ 1.62
SMG9-210ENST00000600097 TRPM3Q9HCF6 1732 aaPredicted RBP25.17■■□□□ 1.62
SMG9-210ENST00000600097 A0A0G2JS52 829 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms