RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 PLEKHH1Q9ULM0 1364 aa11.65□□□□□ -0.55
CHMP2A-205ENST00000600006 DCAF11Q8TEB1 546 aa11.64□□□□□ -0.55
CHMP2A-205ENST00000600006 SIRT1Q96EB6 747 aa11.63□□□□□ -0.55
CHMP2A-205ENST00000600006 STK26Q9P289 416 aa11.63□□□□□ -0.55
CHMP2A-205ENST00000600006 JCADQ9P266 1359 aa11.63□□□□□ -0.55
CHMP2A-205ENST00000600006 TRIM26Q12899 539 aaPredicted RBP11.62□□□□□ -0.55
CHMP2A-205ENST00000600006 KIF1AQ12756 1690 aa11.62□□□□□ -0.55
CHMP2A-205ENST00000600006 WAPLQ7Z5K2 1190 aa11.61□□□□□ -0.55
CHMP2A-205ENST00000600006 KDM2AQ9Y2K7 1162 aa11.61□□□□□ -0.55
CHMP2A-205ENST00000600006 RGPD8O14715 1765 aaPredicted RBP11.6□□□□□ -0.55
CHMP2A-205ENST00000600006 USP32Q8NFA0 1604 aa11.6□□□□□ -0.55
CHMP2A-205ENST00000600006 LRP6O75581 1613 aa11.59□□□□□ -0.55
CHMP2A-205ENST00000600006 TRPM1Q7Z4N2 1603 aa11.59□□□□□ -0.55
CHMP2A-205ENST00000600006 SPATA31A6Q5VVP1 1343 aa11.58□□□□□ -0.56
CHMP2A-205ENST00000600006 COL22A1Q8NFW1 1626 aaPredicted RBP11.57□□□□□ -0.56
CHMP2A-205ENST00000600006 ILDR2Q71H61 639 aa11.57□□□□□ -0.56
CHMP2A-205ENST00000600006 PRAM1Q96QH2 718 aa11.57□□□□□ -0.56
CHMP2A-205ENST00000600006 ORAI2Q96SN7 254 aa11.57□□□□□ -0.56
CHMP2A-205ENST00000600006 PXDNQ92626 1479 aa11.57□□□□□ -0.56
CHMP2A-205ENST00000600006 ANKARQ7Z5J8 1434 aa11.56□□□□□ -0.56
CHMP2A-205ENST00000600006 PHF23Q9BUL5 403 aaPredicted RBP11.56□□□□□ -0.56
CHMP2A-205ENST00000600006 SOS2Q07890 1332 aaPredicted RBP11.56□□□□□ -0.56
CHMP2A-205ENST00000600006 TULP4Q9NRJ4 1543 aa11.55□□□□□ -0.56
CHMP2A-205ENST00000600006 PNPLA6Q8IY17 1366 aa11.55□□□□□ -0.56
CHMP2A-205ENST00000600006 ITSN1Q15811 1721 aa11.55□□□□□ -0.56
CHMP2A-205ENST00000600006 DDX17Q92841 729 aaKnown RBP11.55□□□□□ -0.56
CHMP2A-205ENST00000600006 SIN3AQ96ST3 1273 aa11.55□□□□□ -0.56
CHMP2A-205ENST00000600006 TRAK1Q9UPV9 953 aa11.55□□□□□ -0.56
CHMP2A-205ENST00000600006 L3MBTL2Q969R5 705 aa11.54□□□□□ -0.56
CHMP2A-205ENST00000600006 LRRC59Q96AG4 307 aaKnown RBP11.54□□□□□ -0.56
CHMP2A-205ENST00000600006 POGKQ9P215 609 aa11.54□□□□□ -0.56
CHMP2A-205ENST00000600006 TOPAZ1Q8N9V7 1692 aa11.53□□□□□ -0.56
CHMP2A-205ENST00000600006 QRICH2Q9H0J4 1663 aa11.53□□□□□ -0.56
CHMP2A-205ENST00000600006 SAFB2Q14151 953 aaKnown RBP eCLIP11.53□□□□□ -0.56
CHMP2A-205ENST00000600006 ESCO1Q5FWF5 840 aa11.53□□□□□ -0.56
CHMP2A-205ENST00000600006 NPHP3Q7Z494 1330 aa11.53□□□□□ -0.56
CHMP2A-205ENST00000600006 EIF3AQ14152 1382 aaKnown RBP11.53□□□□□ -0.56
CHMP2A-205ENST00000600006 NUTM2FA1L443 756 aa11.52□□□□□ -0.57
CHMP2A-205ENST00000600006 RGS17Q9UGC6 210 aaPredicted RBP11.52□□□□□ -0.57
CHMP2A-205ENST00000600006 MARF1Q9Y4F3 1742 aaKnown RBP11.52□□□□□ -0.57
CHMP2A-205ENST00000600006 ATP7BP35670 1465 aa11.51□□□□□ -0.57
CHMP2A-205ENST00000600006 MINK1Q8N4C8 1332 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-205ENST00000600006 TRPM3Q9HCF6 1732 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-205ENST00000600006 ABCA3Q99758 1704 aa11.5□□□□□ -0.57
CHMP2A-205ENST00000600006 NEUROD1Q13562 356 aa11.5□□□□□ -0.57
CHMP2A-205ENST00000600006 NBPF1Q3BBV0 1214 aa11.5□□□□□ -0.57
CHMP2A-205ENST00000600006 FOXO3O43524 673 aa11.49□□□□□ -0.57
CHMP2A-205ENST00000600006 PRR36Q9H6K5 1346 aa11.49□□□□□ -0.57
CHMP2A-205ENST00000600006 WASLO00401 505 aaPredicted RBP11.48□□□□□ -0.57
CHMP2A-205ENST00000600006 HIRIP3Q9BW71 556 aaPredicted RBP11.48□□□□□ -0.57
CHMP2A-205ENST00000600006 PHF8Q9UPP1 1060 aa11.48□□□□□ -0.57
CHMP2A-205ENST00000600006 GPRASP1Q5JY77 1395 aa11.48□□□□□ -0.57
CHMP2A-205ENST00000600006 RALGAPBQ86X10 1494 aa11.48□□□□□ -0.57
CHMP2A-205ENST00000600006 ALS2Q96Q42 1657 aa11.48□□□□□ -0.57
CHMP2A-205ENST00000600006 TNS3Q68CZ2 1445 aa11.47□□□□□ -0.57
CHMP2A-205ENST00000600006 TONSLQ96HA7 1378 aa11.47□□□□□ -0.57
CHMP2A-205ENST00000600006 SOCS7O14512 581 aa11.47□□□□□ -0.57
CHMP2A-205ENST00000600006 MEX3CQ5U5Q3 659 aaKnown RBP11.47□□□□□ -0.57
CHMP2A-205ENST00000600006 CRYBG1Q9Y4K1 1723 aa11.46□□□□□ -0.57
CHMP2A-205ENST00000600006 SBNO1A3KN83 1393 aa11.46□□□□□ -0.57
CHMP2A-205ENST00000600006 ROCK2O75116 1388 aaKnown RBP11.46□□□□□ -0.57
CHMP2A-205ENST00000600006 SPATA31A3Q5VYP0 1347 aa11.46□□□□□ -0.57
CHMP2A-205ENST00000600006 CENPJQ9HC77 1338 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-205ENST00000600006 NUTM2BA6NNL0 878 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-205ENST00000600006 NUTM2EB1AL46 878 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-205ENST00000600006 XPCQ01831 940 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-205ENST00000600006 NUTM2AQ8IVF1 878 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-205ENST00000600006 POTEAQ6S8J7 498 aa11.45□□□□□ -0.58
CHMP2A-205ENST00000600006 NBPF8Q3BBV2 869 aa11.44□□□□□ -0.58
CHMP2A-205ENST00000600006 KRT28Q7Z3Y7 464 aa11.44□□□□□ -0.58
CHMP2A-205ENST00000600006 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.43□□□□□ -0.58
CHMP2A-205ENST00000600006 ZNF772Q68DY9 489 aaPredicted RBP11.43□□□□□ -0.58
CHMP2A-205ENST00000600006 PMFBP1Q8TBY8 1022 aa11.43□□□□□ -0.58
CHMP2A-205ENST00000600006 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
CHMP2A-205ENST00000600006 ARHGEF10O15013 1369 aa11.42□□□□□ -0.58
CHMP2A-205ENST00000600006 AFF2P51816 1311 aa11.42□□□□□ -0.58
CHMP2A-205ENST00000600006 PSME1Q06323 249 aa11.42□□□□□ -0.58
CHMP2A-205ENST00000600006 NUDT16Q96DE0 195 aaKnown RBP11.42□□□□□ -0.58
CHMP2A-205ENST00000600006 CDK19Q9BWU1 502 aa11.42□□□□□ -0.58
CHMP2A-205ENST00000600006 PLCH1Q4KWH8 1693 aa11.42□□□□□ -0.58
CHMP2A-205ENST00000600006 POLR3AO14802 1390 aaPredicted RBP11.41□□□□□ -0.58
CHMP2A-205ENST00000600006 SBNO2Q9Y2G9 1366 aa11.41□□□□□ -0.58
CHMP2A-205ENST00000600006 C8orf37Q96NL8 207 aa11.41□□□□□ -0.58
CHMP2A-205ENST00000600006 PHRF1Q9P1Y6 1649 aaKnown RBP11.41□□□□□ -0.58
CHMP2A-205ENST00000600006 NWD2Q9ULI1 1742 aa11.4□□□□□ -0.58
CHMP2A-205ENST00000600006 CLSPNQ9HAW4 1339 aa11.4□□□□□ -0.58
CHMP2A-205ENST00000600006 CDK12Q9NYV4 1490 aaPredicted RBP11.4□□□□□ -0.58
CHMP2A-205ENST00000600006 ADAMTS2O95450 1211 aa11.4□□□□□ -0.58
CHMP2A-205ENST00000600006 AKAP12Q02952 1782 aa11.39□□□□□ -0.59
CHMP2A-205ENST00000600006 PPIP5K1Q6PFW1 1433 aa11.39□□□□□ -0.59
CHMP2A-205ENST00000600006 CCDC61Q9Y6R9 512 aa11.39□□□□□ -0.59
CHMP2A-205ENST00000600006 PLEKHG3A1L390 1219 aa11.38□□□□□ -0.59
CHMP2A-205ENST00000600006 FNBP4Q8N3X1 1017 aaPredicted RBP11.38□□□□□ -0.59
CHMP2A-205ENST00000600006 NGDNQ8NEJ9 315 aaKnown RBP11.38□□□□□ -0.59
CHMP2A-205ENST00000600006 SLIT2O94813 1529 aa11.38□□□□□ -0.59
CHMP2A-205ENST00000600006 NRAPQ86VF7 1730 aa11.38□□□□□ -0.59
CHMP2A-205ENST00000600006 NRKQ7Z2Y5 1582 aa11.37□□□□□ -0.59
CHMP2A-205ENST00000600006 ATRNO75882 1429 aa11.37□□□□□ -0.59
CHMP2A-205ENST00000600006 SRPK2P78362 688 aaKnown RBP11.37□□□□□ -0.59
CHMP2A-205ENST00000600006 NGLY1Q96IV0 654 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms