RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 SIRT1Q96EB6 747 aa16.01■□□□□ 0.15
SIN3B-210ENST00000599880 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
SIN3B-210ENST00000599880 TMEM132EQ6IEE7 984 aa16■□□□□ 0.15
SIN3B-210ENST00000599880 RGS17Q9UGC6 210 aaPredicted RBP16■□□□□ 0.15
SIN3B-210ENST00000599880 STK26Q9P289 416 aa15.99■□□□□ 0.15
SIN3B-210ENST00000599880 KIF1AQ12756 1690 aa15.99■□□□□ 0.15
SIN3B-210ENST00000599880 ADGRB2O60241 1585 aa15.98■□□□□ 0.15
SIN3B-210ENST00000599880 CFAP70Q5T0N1 1121 aa15.98■□□□□ 0.15
SIN3B-210ENST00000599880 LRRC59Q96AG4 307 aaKnown RBP15.98■□□□□ 0.15
SIN3B-210ENST00000599880 PLEKHH1Q9ULM0 1364 aa15.98■□□□□ 0.15
SIN3B-210ENST00000599880 KIAA1210Q9ULL0 1709 aa15.97■□□□□ 0.15
SIN3B-210ENST00000599880 COL22A1Q8NFW1 1626 aaPredicted RBP15.97■□□□□ 0.15
SIN3B-210ENST00000599880 SOS2Q07890 1332 aaPredicted RBP15.96■□□□□ 0.15
SIN3B-210ENST00000599880 RGPD8O14715 1765 aaPredicted RBP15.96■□□□□ 0.15
SIN3B-210ENST00000599880 WAPLQ7Z5K2 1190 aa15.96■□□□□ 0.15
SIN3B-210ENST00000599880 PNPLA6Q8IY17 1366 aa15.96■□□□□ 0.15
SIN3B-210ENST00000599880 ORAI2Q96SN7 254 aa15.95■□□□□ 0.14
SIN3B-210ENST00000599880 ARHGEF28Q8N1W1 1705 aaKnown RBP15.94■□□□□ 0.14
SIN3B-210ENST00000599880 DCAF11Q8TEB1 546 aa15.94■□□□□ 0.14
SIN3B-210ENST00000599880 PXDNQ92626 1479 aa15.93■□□□□ 0.14
SIN3B-210ENST00000599880 DDX17Q92841 729 aaKnown RBP15.93■□□□□ 0.14
SIN3B-210ENST00000599880 NPHP3Q7Z494 1330 aa15.93■□□□□ 0.14
SIN3B-210ENST00000599880 MARF1Q9Y4F3 1742 aaKnown RBP15.91■□□□□ 0.14
SIN3B-210ENST00000599880 ESCO1Q5FWF5 840 aa15.91■□□□□ 0.14
SIN3B-210ENST00000599880 MEX3CQ5U5Q3 659 aaKnown RBP15.91■□□□□ 0.14
SIN3B-210ENST00000599880 POTEAQ6S8J7 498 aa15.91■□□□□ 0.14
SIN3B-210ENST00000599880 USP32Q8NFA0 1604 aa15.9■□□□□ 0.14
SIN3B-210ENST00000599880 PRAM1Q96QH2 718 aa15.9■□□□□ 0.14
SIN3B-210ENST00000599880 KDM2AQ9Y2K7 1162 aa15.9■□□□□ 0.14
SIN3B-210ENST00000599880 ANKARQ7Z5J8 1434 aa15.89■□□□□ 0.13
SIN3B-210ENST00000599880 ZNF772Q68DY9 489 aaPredicted RBP15.89■□□□□ 0.13
SIN3B-210ENST00000599880 NUTM2BA6NNL0 878 aaPredicted RBP15.87■□□□□ 0.13
SIN3B-210ENST00000599880 NUTM2EB1AL46 878 aaPredicted RBP15.87■□□□□ 0.13
SIN3B-210ENST00000599880 NUTM2AQ8IVF1 878 aaPredicted RBP15.87■□□□□ 0.13
SIN3B-210ENST00000599880 POGKQ9P215 609 aa15.87■□□□□ 0.13
SIN3B-210ENST00000599880 ITSN1Q15811 1721 aa15.87■□□□□ 0.13
SIN3B-210ENST00000599880 EIF3AQ14152 1382 aaKnown RBP15.86■□□□□ 0.13
SIN3B-210ENST00000599880 TULP4Q9NRJ4 1543 aa15.85■□□□□ 0.13
SIN3B-210ENST00000599880 NUTM2FA1L443 756 aa15.85■□□□□ 0.13
SIN3B-210ENST00000599880 FOXO3O43524 673 aa15.85■□□□□ 0.13
SIN3B-210ENST00000599880 TRAK1Q9UPV9 953 aa15.85■□□□□ 0.13
SIN3B-210ENST00000599880 SAFB2Q14151 953 aaKnown RBP eCLIP15.84■□□□□ 0.13
SIN3B-210ENST00000599880 AFF2P51816 1311 aa15.83■□□□□ 0.12
SIN3B-210ENST00000599880 CDK12Q9NYV4 1490 aaPredicted RBP15.83■□□□□ 0.12
SIN3B-210ENST00000599880 PHF8Q9UPP1 1060 aa15.82■□□□□ 0.12
SIN3B-210ENST00000599880 ABCA3Q99758 1704 aa15.82■□□□□ 0.12
SIN3B-210ENST00000599880 TRPM3Q9HCF6 1732 aaPredicted RBP15.82■□□□□ 0.12
SIN3B-210ENST00000599880 TNS3Q68CZ2 1445 aa15.81■□□□□ 0.12
SIN3B-210ENST00000599880 TRPM1Q7Z4N2 1603 aa15.81■□□□□ 0.12
SIN3B-210ENST00000599880 C8orf37Q96NL8 207 aa15.81■□□□□ 0.12
SIN3B-210ENST00000599880 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.8■□□□□ 0.12
SIN3B-210ENST00000599880 TOPAZ1Q8N9V7 1692 aa15.8■□□□□ 0.12
SIN3B-210ENST00000599880 SPATA31A3Q5VYP0 1347 aa15.8■□□□□ 0.12
SIN3B-210ENST00000599880 SBNO1A3KN83 1393 aa15.79■□□□□ 0.12
SIN3B-210ENST00000599880 MINK1Q8N4C8 1332 aaPredicted RBP15.79■□□□□ 0.12
SIN3B-210ENST00000599880 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
SIN3B-210ENST00000599880 ALS2Q96Q42 1657 aa15.79■□□□□ 0.12
SIN3B-210ENST00000599880 ATP7BP35670 1465 aa15.78■□□□□ 0.12
SIN3B-210ENST00000599880 WASLO00401 505 aaPredicted RBP15.78■□□□□ 0.12
SIN3B-210ENST00000599880 KRT28Q7Z3Y7 464 aa15.78■□□□□ 0.12
SIN3B-210ENST00000599880 HIRIP3Q9BW71 556 aaPredicted RBP15.78■□□□□ 0.12
SIN3B-210ENST00000599880 QRICH2Q9H0J4 1663 aa15.77■□□□□ 0.12
SIN3B-210ENST00000599880 ADAMTS2O95450 1211 aa15.77■□□□□ 0.12
SIN3B-210ENST00000599880 PSME1Q06323 249 aa15.77■□□□□ 0.12
SIN3B-210ENST00000599880 ARHGEF10O15013 1369 aa15.76■□□□□ 0.11
SIN3B-210ENST00000599880 PRR36Q9H6K5 1346 aa15.76■□□□□ 0.11
SIN3B-210ENST00000599880 RXRBP28702 533 aa15.76■□□□□ 0.11
SIN3B-210ENST00000599880 NGLY1Q96IV0 654 aa15.76■□□□□ 0.11
SIN3B-210ENST00000599880 FNBP4Q8N3X1 1017 aaPredicted RBP15.75■□□□□ 0.11
SIN3B-210ENST00000599880 L3MBTL2Q969R5 705 aa15.75■□□□□ 0.11
SIN3B-210ENST00000599880 NWD2Q9ULI1 1742 aa15.74■□□□□ 0.11
SIN3B-210ENST00000599880 CRYBG1Q9Y4K1 1723 aa15.74■□□□□ 0.11
SIN3B-210ENST00000599880 NBPF1Q3BBV0 1214 aa15.74■□□□□ 0.11
SIN3B-210ENST00000599880 PLCH1Q4KWH8 1693 aa15.73■□□□□ 0.11
SIN3B-210ENST00000599880 RBM6P78332 1123 aaKnown RBP15.73■□□□□ 0.11
SIN3B-210ENST00000599880 SIN3AQ96ST3 1273 aa15.73■□□□□ 0.11
SIN3B-210ENST00000599880 QTRT2Q9H974 415 aaKnown RBP15.73■□□□□ 0.11
SIN3B-210ENST00000599880 USP21Q9UK80 565 aa15.73■□□□□ 0.11
SIN3B-210ENST00000599880 ATRNO75882 1429 aa15.73■□□□□ 0.11
SIN3B-210ENST00000599880 GPRASP1Q5JY77 1395 aa15.73■□□□□ 0.11
SIN3B-210ENST00000599880 RGS12O14924 1447 aa15.72■□□□□ 0.11
SIN3B-210ENST00000599880 TRIM26Q12899 539 aaPredicted RBP15.72■□□□□ 0.11
SIN3B-210ENST00000599880 PMFBP1Q8TBY8 1022 aa15.72■□□□□ 0.11
SIN3B-210ENST00000599880 SLIT2O94813 1529 aa15.72■□□□□ 0.11
SIN3B-210ENST00000599880 BCL9LQ86UU0 1499 aa15.71■□□□□ 0.11
SIN3B-210ENST00000599880 TRPC5Q9UL62 973 aaPredicted RBP15.71■□□□□ 0.11
SIN3B-210ENST00000599880 CENPJQ9HC77 1338 aaPredicted RBP15.7■□□□□ 0.1
SIN3B-210ENST00000599880 NUDT16Q96DE0 195 aaKnown RBP15.69■□□□□ 0.1
SIN3B-210ENST00000599880 POLR3AO14802 1390 aaPredicted RBP15.69■□□□□ 0.1
SIN3B-210ENST00000599880 NEUROD1Q13562 356 aa15.68■□□□□ 0.1
SIN3B-210ENST00000599880 NGDNQ8NEJ9 315 aaKnown RBP15.68■□□□□ 0.1
SIN3B-210ENST00000599880 CDK19Q9BWU1 502 aa15.68■□□□□ 0.1
SIN3B-210ENST00000599880 ROCK2O75116 1388 aaKnown RBP15.67■□□□□ 0.1
SIN3B-210ENST00000599880 CCDC61Q9Y6R9 512 aa15.67■□□□□ 0.1
SIN3B-210ENST00000599880 NRAPQ86VF7 1730 aa15.67■□□□□ 0.1
SIN3B-210ENST00000599880 PHRF1Q9P1Y6 1649 aaKnown RBP15.67■□□□□ 0.1
SIN3B-210ENST00000599880 COL14A1Q05707 1796 aaKnown RBP15.67■□□□□ 0.1
SIN3B-210ENST00000599880 HAP1P54257 671 aaPredicted RBP15.66■□□□□ 0.1
SIN3B-210ENST00000599880 LMOD2Q6P5Q4 547 aa15.66■□□□□ 0.1
SIN3B-210ENST00000599880 GLI3P10071 1580 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms