RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 MEX3CQ5U5Q3 659 aaKnown RBP23.45■■□□□ 1.34
SMG9-208ENST00000598886 ZNF772Q68DY9 489 aaPredicted RBP23.45■■□□□ 1.34
SMG9-208ENST00000598886 ABCC11Q96J66 1382 aa23.44■■□□□ 1.34
SMG9-208ENST00000598886 MARF1Q9Y4F3 1742 aaKnown RBP23.44■■□□□ 1.34
SMG9-208ENST00000598886 NUTM2BA6NNL0 878 aaPredicted RBP23.43■■□□□ 1.34
SMG9-208ENST00000598886 NUTM2EB1AL46 878 aaPredicted RBP23.43■■□□□ 1.34
SMG9-208ENST00000598886 NUTM2AQ8IVF1 878 aaPredicted RBP23.43■■□□□ 1.34
SMG9-208ENST00000598886 PLEKHH1Q9ULM0 1364 aa23.42■■□□□ 1.34
SMG9-208ENST00000598886 RGL3Q3MIN7 710 aa23.42■■□□□ 1.34
SMG9-208ENST00000598886 AFF2P51816 1311 aa23.41■■□□□ 1.34
SMG9-208ENST00000598886 YTHDC2Q9H6S0 1430 aaKnown RBP23.41■■□□□ 1.34
SMG9-208ENST00000598886 RAB3GAP2Q9H2M9 1393 aa23.4■■□□□ 1.34
SMG9-208ENST00000598886 RGPD8O14715 1765 aaPredicted RBP23.4■■□□□ 1.34
SMG9-208ENST00000598886 KIF1AQ12756 1690 aa23.39■■□□□ 1.34
SMG9-208ENST00000598886 ACIN1Q9UKV3 1341 aaKnown RBP23.38■■□□□ 1.33
SMG9-208ENST00000598886 TMEM132EQ6IEE7 984 aa23.37■■□□□ 1.33
SMG9-208ENST00000598886 WAPLQ7Z5K2 1190 aa23.36■■□□□ 1.33
SMG9-208ENST00000598886 ADGRB1O14514 1584 aa23.35■■□□□ 1.33
SMG9-208ENST00000598886 RGS12O14924 1447 aa23.35■■□□□ 1.33
SMG9-208ENST00000598886 C14orf93Q9H972 538 aaKnown RBP23.33■■□□□ 1.33
SMG9-208ENST00000598886 STK26Q9P289 416 aa23.33■■□□□ 1.33
SMG9-208ENST00000598886 USP32Q8NFA0 1604 aa23.33■■□□□ 1.32
SMG9-208ENST00000598886 DLC1Q96QB1 1528 aa23.33■■□□□ 1.32
SMG9-208ENST00000598886 ADGRB2O60241 1585 aa23.32■■□□□ 1.32
SMG9-208ENST00000598886 RXRBP28702 533 aa23.32■■□□□ 1.32
SMG9-208ENST00000598886 C8orf37Q96NL8 207 aa23.32■■□□□ 1.32
SMG9-208ENST00000598886 SIRT1Q96EB6 747 aa23.31■■□□□ 1.32
SMG9-208ENST00000598886 NPHP3Q7Z494 1330 aa23.31■■□□□ 1.32
SMG9-208ENST00000598886 UPF1Q92900 1129 aaKnown RBP eCLIP23.3■■□□□ 1.32
SMG9-208ENST00000598886 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.3■■□□□ 1.32
SMG9-208ENST00000598886 ESCO1Q5FWF5 840 aa23.29■■□□□ 1.32
SMG9-208ENST00000598886 ABCA3Q99758 1704 aa23.29■■□□□ 1.32
SMG9-208ENST00000598886 ADAMTS2O95450 1211 aa23.27■■□□□ 1.32
SMG9-208ENST00000598886 CFAP70Q5T0N1 1121 aa23.27■■□□□ 1.32
SMG9-208ENST00000598886 ATRNO75882 1429 aa23.25■■□□□ 1.31
SMG9-208ENST00000598886 FOXO3O43524 673 aa23.25■■□□□ 1.31
SMG9-208ENST00000598886 FNBP4Q8N3X1 1017 aaPredicted RBP23.25■■□□□ 1.31
SMG9-208ENST00000598886 BCL9LQ86UU0 1499 aa23.24■■□□□ 1.31
SMG9-208ENST00000598886 RBM6P78332 1123 aaKnown RBP23.24■■□□□ 1.31
SMG9-208ENST00000598886 QTRT2Q9H974 415 aaKnown RBP23.24■■□□□ 1.31
SMG9-208ENST00000598886 NUTM2FA1L443 756 aa23.23■■□□□ 1.31
SMG9-208ENST00000598886 XPCQ01831 940 aaPredicted RBP23.23■■□□□ 1.31
SMG9-208ENST00000598886 DHX57Q6P158 1386 aaKnown RBP23.23■■□□□ 1.31
SMG9-208ENST00000598886 TRPM3Q9HCF6 1732 aaPredicted RBP23.22■■□□□ 1.31
SMG9-208ENST00000598886 NGLY1Q96IV0 654 aa23.22■■□□□ 1.31
SMG9-208ENST00000598886 ARHGEF28Q8N1W1 1705 aaKnown RBP23.22■■□□□ 1.31
SMG9-208ENST00000598886 SPATA31A3Q5VYP0 1347 aa23.19■■□□□ 1.3
SMG9-208ENST00000598886 ANKARQ7Z5J8 1434 aa23.18■■□□□ 1.3
SMG9-208ENST00000598886 USP21Q9UK80 565 aa23.18■■□□□ 1.3
SMG9-208ENST00000598886 PLCH1Q4KWH8 1693 aa23.18■■□□□ 1.3
SMG9-208ENST00000598886 SLIT2O94813 1529 aa23.18■■□□□ 1.3
SMG9-208ENST00000598886 EP400Q96L91 3159 aa23.17■■□□□ 1.3
SMG9-208ENST00000598886 ALS2Q96Q42 1657 aa23.17■■□□□ 1.3
SMG9-208ENST00000598886 HRCP23327 699 aa23.17■■□□□ 1.3
SMG9-208ENST00000598886 PRAM1Q96QH2 718 aa23.17■■□□□ 1.3
SMG9-208ENST00000598886 GLI3P10071 1580 aa23.17■■□□□ 1.3
SMG9-208ENST00000598886 TNS3Q68CZ2 1445 aa23.16■■□□□ 1.3
SMG9-208ENST00000598886 CRYBG1Q9Y4K1 1723 aa23.16■■□□□ 1.3
SMG9-208ENST00000598886 NWD2Q9ULI1 1742 aa23.15■■□□□ 1.3
SMG9-208ENST00000598886 TRPC5Q9UL62 973 aaPredicted RBP23.14■■□□□ 1.29
SMG9-208ENST00000598886 TULP4Q9NRJ4 1543 aa23.13■■□□□ 1.29
SMG9-208ENST00000598886 PHF8Q9UPP1 1060 aa23.13■■□□□ 1.29
SMG9-208ENST00000598886 KIAA1210Q9ULL0 1709 aa23.13■■□□□ 1.29
SMG9-208ENST00000598886 SBNO1A3KN83 1393 aa23.12■■□□□ 1.29
SMG9-208ENST00000598886 KRT28Q7Z3Y7 464 aa23.11■■□□□ 1.29
SMG9-208ENST00000598886 BRWD3Q6RI45 1802 aa23.1■■□□□ 1.29
SMG9-208ENST00000598886 SAFB2Q14151 953 aaKnown RBP eCLIP23.1■■□□□ 1.29
SMG9-208ENST00000598886 NRAPQ86VF7 1730 aa23.1■■□□□ 1.29
SMG9-208ENST00000598886 ITSN1Q15811 1721 aa23.09■■□□□ 1.29
SMG9-208ENST00000598886 TOPAZ1Q8N9V7 1692 aa23.09■■□□□ 1.29
SMG9-208ENST00000598886 PRR36Q9H6K5 1346 aa23.08■■□□□ 1.29
SMG9-208ENST00000598886 DCAF11Q8TEB1 546 aa23.08■■□□□ 1.29
SMG9-208ENST00000598886 RALGAPBQ86X10 1494 aa23.07■■□□□ 1.28
SMG9-208ENST00000598886 ATAD2Q6PL18 1390 aa23.06■■□□□ 1.28
SMG9-208ENST00000598886 STAC3Q96MF2 364 aa23.06■■□□□ 1.28
SMG9-208ENST00000598886 TRAK1Q9UPV9 953 aa23.06■■□□□ 1.28
SMG9-208ENST00000598886 ATP7BP35670 1465 aa23.05■■□□□ 1.28
SMG9-208ENST00000598886 POGKQ9P215 609 aa23.04■■□□□ 1.28
SMG9-208ENST00000598886 ARHGEF10O15013 1369 aa23.03■■□□□ 1.28
SMG9-208ENST00000598886 KDM2AQ9Y2K7 1162 aa23.03■■□□□ 1.28
SMG9-208ENST00000598886 UNC5CLQ8IV45 518 aa23.02■■□□□ 1.28
SMG9-208ENST00000598886 GJD4Q96KN9 370 aaPredicted RBP23.02■■□□□ 1.28
SMG9-208ENST00000598886 HIRIP3Q9BW71 556 aaPredicted RBP23.02■■□□□ 1.28
SMG9-208ENST00000598886 MINK1Q8N4C8 1332 aaPredicted RBP23.02■■□□□ 1.28
SMG9-208ENST00000598886 PSME1Q06323 249 aa23.01■■□□□ 1.27
SMG9-208ENST00000598886 CABLES1Q8TDN4 633 aa23.01■■□□□ 1.27
SMG9-208ENST00000598886 EIF3AQ14152 1382 aaKnown RBP23.01■■□□□ 1.27
SMG9-208ENST00000598886 COL14A1Q05707 1796 aaKnown RBP23■■□□□ 1.27
SMG9-208ENST00000598886 PMFBP1Q8TBY8 1022 aa23■■□□□ 1.27
SMG9-208ENST00000598886 WASLO00401 505 aaPredicted RBP22.99■■□□□ 1.27
SMG9-208ENST00000598886 PHRF1Q9P1Y6 1649 aaKnown RBP22.99■■□□□ 1.27
SMG9-208ENST00000598886 VPS72Q15906 364 aa22.93■■□□□ 1.26
SMG9-208ENST00000598886 GPRASP1Q5JY77 1395 aa22.91■■□□□ 1.26
SMG9-208ENST00000598886 FAM83GA6ND36 823 aa22.91■■□□□ 1.26
SMG9-208ENST00000598886 QRICH2Q9H0J4 1663 aa22.9■■□□□ 1.26
SMG9-208ENST00000598886 ONECUT3O60422 494 aaPredicted RBP22.9■■□□□ 1.26
SMG9-208ENST00000598886 THSD7AQ9UPZ6 1657 aa22.9■■□□□ 1.26
SMG9-208ENST00000598886 POLR3AO14802 1390 aaPredicted RBP22.89■■□□□ 1.26
SMG9-208ENST00000598886 LMOD2Q6P5Q4 547 aa22.88■■□□□ 1.25
SMG9-208ENST00000598886 TRPM1Q7Z4N2 1603 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms