RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 COL16A1Q07092 1604 aaPredicted RBP18.05■□□□□ 0.48
C19orf54-208ENST00000598352 PRAM1Q96QH2 718 aa18.04■□□□□ 0.48
C19orf54-208ENST00000598352 ORAI2Q96SN7 254 aa18.04■□□□□ 0.48
C19orf54-208ENST00000598352 CDC42BPGQ6DT37 1551 aa18.04■□□□□ 0.48
C19orf54-208ENST00000598352 PHLPP1O60346 1717 aa18.03■□□□□ 0.48
C19orf54-208ENST00000598352 DDX17Q92841 729 aaKnown RBP18.03■□□□□ 0.48
C19orf54-208ENST00000598352 TRAK1Q9UPV9 953 aa18.03■□□□□ 0.48
C19orf54-208ENST00000598352 NEUROD1Q13562 356 aa18.02■□□□□ 0.48
C19orf54-208ENST00000598352 JCADQ9P266 1359 aa18.02■□□□□ 0.47
C19orf54-208ENST00000598352 NBPF1Q3BBV0 1214 aa18.01■□□□□ 0.47
C19orf54-208ENST00000598352 SAFB2Q14151 953 aaKnown RBP eCLIP18■□□□□ 0.47
C19orf54-208ENST00000598352 ILDR2Q71H61 639 aa18■□□□□ 0.47
C19orf54-208ENST00000598352 POGKQ9P215 609 aa17.98■□□□□ 0.47
C19orf54-208ENST00000598352 NHSL1Q5SYE7 1610 aa17.98■□□□□ 0.47
C19orf54-208ENST00000598352 NUTM2FA1L443 756 aa17.97■□□□□ 0.47
C19orf54-208ENST00000598352 SOS2Q07890 1332 aaPredicted RBP17.97■□□□□ 0.47
C19orf54-208ENST00000598352 ESCO1Q5FWF5 840 aa17.96■□□□□ 0.47
C19orf54-208ENST00000598352 KIAA1210Q9ULL0 1709 aa17.95■□□□□ 0.46
C19orf54-208ENST00000598352 RGS17Q9UGC6 210 aaPredicted RBP17.95■□□□□ 0.46
C19orf54-208ENST00000598352 LRRC59Q96AG4 307 aaKnown RBP17.94■□□□□ 0.46
C19orf54-208ENST00000598352 FMN2Q9NZ56 1722 aa17.94■□□□□ 0.46
C19orf54-208ENST00000598352 SPATA31A6Q5VVP1 1343 aa17.94■□□□□ 0.46
C19orf54-208ENST00000598352 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
C19orf54-208ENST00000598352 MINK1Q8N4C8 1332 aaPredicted RBP17.93■□□□□ 0.46
C19orf54-208ENST00000598352 ADGRB2O60241 1585 aa17.92■□□□□ 0.46
C19orf54-208ENST00000598352 FOXO3O43524 673 aa17.92■□□□□ 0.46
C19orf54-208ENST00000598352 NBPF8Q3BBV2 869 aa17.92■□□□□ 0.46
C19orf54-208ENST00000598352 PNPLA6Q8IY17 1366 aa17.91■□□□□ 0.46
C19orf54-208ENST00000598352 LRP6O75581 1613 aa17.91■□□□□ 0.46
C19orf54-208ENST00000598352 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
C19orf54-208ENST00000598352 WASLO00401 505 aaPredicted RBP17.9■□□□□ 0.46
C19orf54-208ENST00000598352 NPHP3Q7Z494 1330 aa17.9■□□□□ 0.46
C19orf54-208ENST00000598352 PRR36Q9H6K5 1346 aa17.9■□□□□ 0.46
C19orf54-208ENST00000598352 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.46
C19orf54-208ENST00000598352 PXDNQ92626 1479 aa17.89■□□□□ 0.45
C19orf54-208ENST00000598352 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
C19orf54-208ENST00000598352 PCGF6Q9BYE7 350 aa17.89■□□□□ 0.45
C19orf54-208ENST00000598352 ANKARQ7Z5J8 1434 aa17.89■□□□□ 0.45
C19orf54-208ENST00000598352 XPCQ01831 940 aaPredicted RBP17.88■□□□□ 0.45
C19orf54-208ENST00000598352 PHF8Q9UPP1 1060 aa17.88■□□□□ 0.45
C19orf54-208ENST00000598352 USP32Q8NFA0 1604 aa17.87■□□□□ 0.45
C19orf54-208ENST00000598352 GPRASP1Q5JY77 1395 aa17.85■□□□□ 0.45
C19orf54-208ENST00000598352 TRPM1Q7Z4N2 1603 aa17.85■□□□□ 0.45
C19orf54-208ENST00000598352 TULP4Q9NRJ4 1543 aa17.84■□□□□ 0.45
C19orf54-208ENST00000598352 NUTM2BA6NNL0 878 aaPredicted RBP17.84■□□□□ 0.45
C19orf54-208ENST00000598352 NUTM2EB1AL46 878 aaPredicted RBP17.84■□□□□ 0.45
C19orf54-208ENST00000598352 POTEAQ6S8J7 498 aa17.84■□□□□ 0.45
C19orf54-208ENST00000598352 NUTM2AQ8IVF1 878 aaPredicted RBP17.84■□□□□ 0.45
C19orf54-208ENST00000598352 RGPD8O14715 1765 aaPredicted RBP17.84■□□□□ 0.45
C19orf54-208ENST00000598352 EIF3AQ14152 1382 aaKnown RBP17.83■□□□□ 0.45
C19orf54-208ENST00000598352 TONSLQ96HA7 1378 aa17.83■□□□□ 0.45
C19orf54-208ENST00000598352 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.44
C19orf54-208ENST00000598352 KRT28Q7Z3Y7 464 aa17.83■□□□□ 0.44
C19orf54-208ENST00000598352 CDK19Q9BWU1 502 aa17.83■□□□□ 0.44
C19orf54-208ENST00000598352 KIF1AQ12756 1690 aa17.83■□□□□ 0.44
C19orf54-208ENST00000598352 ROCK2O75116 1388 aaKnown RBP17.82■□□□□ 0.44
C19orf54-208ENST00000598352 SPATA31A3Q5VYP0 1347 aa17.82■□□□□ 0.44
C19orf54-208ENST00000598352 PMFBP1Q8TBY8 1022 aa17.82■□□□□ 0.44
C19orf54-208ENST00000598352 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
C19orf54-208ENST00000598352 ATP7BP35670 1465 aa17.8■□□□□ 0.44
C19orf54-208ENST00000598352 MEX3CQ5U5Q3 659 aaKnown RBP17.79■□□□□ 0.44
C19orf54-208ENST00000598352 SBNO1A3KN83 1393 aa17.79■□□□□ 0.44
C19orf54-208ENST00000598352 COL22A1Q8NFW1 1626 aaPredicted RBP17.78■□□□□ 0.44
C19orf54-208ENST00000598352 RALGAPBQ86X10 1494 aa17.77■□□□□ 0.44
C19orf54-208ENST00000598352 PSME1Q06323 249 aa17.77■□□□□ 0.44
C19orf54-208ENST00000598352 CLSPNQ9HAW4 1339 aa17.76■□□□□ 0.43
C19orf54-208ENST00000598352 TNS3Q68CZ2 1445 aa17.76■□□□□ 0.43
C19orf54-208ENST00000598352 SOCS7O14512 581 aa17.76■□□□□ 0.43
C19orf54-208ENST00000598352 CCDC61Q9Y6R9 512 aa17.76■□□□□ 0.43
C19orf54-208ENST00000598352 PLEKHG3A1L390 1219 aa17.75■□□□□ 0.43
C19orf54-208ENST00000598352 ADAMTS2O95450 1211 aa17.75■□□□□ 0.43
C19orf54-208ENST00000598352 AFF2P51816 1311 aa17.74■□□□□ 0.43
C19orf54-208ENST00000598352 CARD11Q9BXL7 1154 aa17.74■□□□□ 0.43
C19orf54-208ENST00000598352 CABP2Q9NPB3 220 aa17.74■□□□□ 0.43
C19orf54-208ENST00000598352 ZNF772Q68DY9 489 aaPredicted RBP17.73■□□□□ 0.43
C19orf54-208ENST00000598352 NGDNQ8NEJ9 315 aaKnown RBP17.73■□□□□ 0.43
C19orf54-208ENST00000598352 C8orf37Q96NL8 207 aa17.73■□□□□ 0.43
C19orf54-208ENST00000598352 POLR3AO14802 1390 aaPredicted RBP17.73■□□□□ 0.43
C19orf54-208ENST00000598352 QRICH2Q9H0J4 1663 aa17.72■□□□□ 0.43
C19orf54-208ENST00000598352 ARHGEF10O15013 1369 aa17.71■□□□□ 0.43
C19orf54-208ENST00000598352 SRPK2P78362 688 aaKnown RBP17.71■□□□□ 0.43
C19orf54-208ENST00000598352 FNBP4Q8N3X1 1017 aaPredicted RBP17.71■□□□□ 0.43
C19orf54-208ENST00000598352 TRPM3Q9HCF6 1732 aaPredicted RBP17.71■□□□□ 0.43
C19orf54-208ENST00000598352 ACEP12821 1306 aa17.71■□□□□ 0.42
C19orf54-208ENST00000598352 TOPAZ1Q8N9V7 1692 aa17.71■□□□□ 0.42
C19orf54-208ENST00000598352 CABLES1Q8TDN4 633 aa17.7■□□□□ 0.42
C19orf54-208ENST00000598352 NGLY1Q96IV0 654 aa17.7■□□□□ 0.42
C19orf54-208ENST00000598352 TIMELESSQ9UNS1 1208 aa17.7■□□□□ 0.42
C19orf54-208ENST00000598352 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
C19orf54-208ENST00000598352 SBNO2Q9Y2G9 1366 aa17.69■□□□□ 0.42
C19orf54-208ENST00000598352 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
C19orf54-208ENST00000598352 PPIP5K1Q6PFW1 1433 aa17.67■□□□□ 0.42
C19orf54-208ENST00000598352 LMOD2Q6P5Q4 547 aa17.67■□□□□ 0.42
C19orf54-208ENST00000598352 CABP1Q9NZU7 370 aa17.67■□□□□ 0.42
C19orf54-208ENST00000598352 QTRT2Q9H974 415 aaKnown RBP17.66■□□□□ 0.42
C19orf54-208ENST00000598352 ALS2Q96Q42 1657 aa17.66■□□□□ 0.42
C19orf54-208ENST00000598352 TESK2Q96S53 571 aa17.65■□□□□ 0.42
C19orf54-208ENST00000598352 BCL9LQ86UU0 1499 aa17.64■□□□□ 0.41
C19orf54-208ENST00000598352 PAK3O75914 559 aaPredicted RBP17.64■□□□□ 0.41
C19orf54-208ENST00000598352 CCER1Q8TC90 406 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms