RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 POTEAQ6S8J7 498 aa33.72■■■□□ 2.99
SSBP4-205ENST00000598159 DDX17Q92841 729 aaKnown RBP33.72■■■□□ 2.99
SSBP4-205ENST00000598159 STAC3Q96MF2 364 aa33.72■■■□□ 2.99
SSBP4-205ENST00000598159 DHX57Q6P158 1386 aaKnown RBP33.72■■■□□ 2.99
SSBP4-205ENST00000598159 MEX3CQ5U5Q3 659 aaKnown RBP33.71■■■□□ 2.99
SSBP4-205ENST00000598159 KNDC1Q76NI1 1749 aa33.69■■■□□ 2.98
SSBP4-205ENST00000598159 LRP6O75581 1613 aa33.66■■■□□ 2.98
SSBP4-205ENST00000598159 LAMC1P11047 1609 aa33.66■■■□□ 2.98
SSBP4-205ENST00000598159 CDC42BPGQ6DT37 1551 aa33.66■■■□□ 2.98
SSBP4-205ENST00000598159 DCAF11Q8TEB1 546 aa33.66■■■□□ 2.98
SSBP4-205ENST00000598159 NUTM2BA6NNL0 878 aaPredicted RBP33.65■■■□□ 2.98
SSBP4-205ENST00000598159 NUTM2EB1AL46 878 aaPredicted RBP33.65■■■□□ 2.98
SSBP4-205ENST00000598159 ESCO1Q5FWF5 840 aa33.65■■■□□ 2.98
SSBP4-205ENST00000598159 NUTM2AQ8IVF1 878 aaPredicted RBP33.65■■■□□ 2.98
SSBP4-205ENST00000598159 KDM2AQ9Y2K7 1162 aa33.65■■■□□ 2.98
SSBP4-205ENST00000598159 PLEKHH1Q9ULM0 1364 aa33.64■■■□□ 2.98
SSBP4-205ENST00000598159 SOS2Q07890 1332 aaPredicted RBP33.63■■■□□ 2.97
SSBP4-205ENST00000598159 ZNF772Q68DY9 489 aaPredicted RBP33.61■■■□□ 2.97
SSBP4-205ENST00000598159 PNPLA6Q8IY17 1366 aa33.6■■■□□ 2.97
SSBP4-205ENST00000598159 NPHP3Q7Z494 1330 aa33.57■■■□□ 2.97
SSBP4-205ENST00000598159 NUTM2FA1L443 756 aa33.56■■■□□ 2.96
SSBP4-205ENST00000598159 PRAM1Q96QH2 718 aa33.54■■■□□ 2.96
SSBP4-205ENST00000598159 FOXO3O43524 673 aa33.53■■■□□ 2.96
SSBP4-205ENST00000598159 POGKQ9P215 609 aa33.53■■■□□ 2.96
SSBP4-205ENST00000598159 DLC1Q96QB1 1528 aa33.5■■■□□ 2.95
SSBP4-205ENST00000598159 TRAK1Q9UPV9 953 aa33.49■■■□□ 2.95
SSBP4-205ENST00000598159 FMN2Q9NZ56 1722 aa33.48■■■□□ 2.95
SSBP4-205ENST00000598159 ADGRB1O14514 1584 aa33.48■■■□□ 2.95
SSBP4-205ENST00000598159 SAFB2Q14151 953 aaKnown RBP eCLIP33.48■■■□□ 2.951e-6■■■■□ 20.5
SSBP4-205ENST00000598159 AFF2P51816 1311 aa33.46■■■□□ 2.95
SSBP4-205ENST00000598159 C8orf37Q96NL8 207 aa33.44■■■□□ 2.94
SSBP4-205ENST00000598159 PXDNQ92626 1479 aa33.43■■■□□ 2.94
SSBP4-205ENST00000598159 ADAMTS2O95450 1211 aa33.41■■■□□ 2.94
SSBP4-205ENST00000598159 RXRBP28702 533 aa33.41■■■□□ 2.94
SSBP4-205ENST00000598159 XPCQ01831 940 aaPredicted RBP33.41■■■□□ 2.94
SSBP4-205ENST00000598159 NGLY1Q96IV0 654 aa33.4■■■□□ 2.94
SSBP4-205ENST00000598159 PHF8Q9UPP1 1060 aa33.4■■■□□ 2.94
SSBP4-205ENST00000598159 KIF1AQ12756 1690 aa33.38■■■□□ 2.93
SSBP4-205ENST00000598159 KRT28Q7Z3Y7 464 aa33.37■■■□□ 2.93
SSBP4-205ENST00000598159 RGPD8O14715 1765 aaPredicted RBP33.37■■■□□ 2.93
SSBP4-205ENST00000598159 COL22A1Q8NFW1 1626 aaPredicted RBP33.36■■■□□ 2.93
SSBP4-205ENST00000598159 PSME1Q06323 249 aa33.35■■■□□ 2.93
SSBP4-205ENST00000598159 QTRT2Q9H974 415 aaKnown RBP33.35■■■□□ 2.93
SSBP4-205ENST00000598159 MINK1Q8N4C8 1332 aaPredicted RBP33.33■■■□□ 2.93
SSBP4-205ENST00000598159 HIRIP3Q9BW71 556 aaPredicted RBP33.33■■■□□ 2.93
SSBP4-205ENST00000598159 SPATA31A3Q5VYP0 1347 aa33.32■■■□□ 2.93
SSBP4-205ENST00000598159 ANKARQ7Z5J8 1434 aa33.32■■■□□ 2.92
SSBP4-205ENST00000598159 ADGRB2O60241 1585 aa33.31■■■□□ 2.92
SSBP4-205ENST00000598159 WASLO00401 505 aaPredicted RBP33.29■■■□□ 2.92
SSBP4-205ENST00000598159 EIF3AQ14152 1382 aaKnown RBP33.29■■■□□ 2.92
SSBP4-205ENST00000598159 FNBP4Q8N3X1 1017 aaPredicted RBP33.28■■■□□ 2.92
SSBP4-205ENST00000598159 RBM6P78332 1123 aaKnown RBP33.27■■■□□ 2.92
SSBP4-205ENST00000598159 KIAA1210Q9ULL0 1709 aa33.27■■■□□ 2.92
SSBP4-205ENST00000598159 PMFBP1Q8TBY8 1022 aa33.26■■■□□ 2.91
SSBP4-205ENST00000598159 USP21Q9UK80 565 aa33.26■■■□□ 2.91
SSBP4-205ENST00000598159 CDK12Q9NYV4 1490 aaPredicted RBP33.25■■■□□ 2.91
SSBP4-205ENST00000598159 USP32Q8NFA0 1604 aa33.23■■■□□ 2.91
SSBP4-205ENST00000598159 SBNO1A3KN83 1393 aa33.22■■■□□ 2.91
SSBP4-205ENST00000598159 NBPF1Q3BBV0 1214 aa33.22■■■□□ 2.91
SSBP4-205ENST00000598159 ARHGEF28Q8N1W1 1705 aaKnown RBP33.22■■■□□ 2.91
SSBP4-205ENST00000598159 L3MBTL2Q969R5 705 aa33.21■■■□□ 2.91
SSBP4-205ENST00000598159 SIN3AQ96ST3 1273 aa33.21■■■□□ 2.91
SSBP4-205ENST00000598159 TRPC5Q9UL62 973 aaPredicted RBP33.21■■■□□ 2.91
SSBP4-205ENST00000598159 TULP4Q9NRJ4 1543 aa33.19■■■□□ 2.9
SSBP4-205ENST00000598159 PRR36Q9H6K5 1346 aa33.19■■■□□ 2.9
SSBP4-205ENST00000598159 TNS3Q68CZ2 1445 aa33.19■■■□□ 2.9
SSBP4-205ENST00000598159 MARF1Q9Y4F3 1742 aaKnown RBP33.17■■■□□ 2.9
SSBP4-205ENST00000598159 ARHGEF10O15013 1369 aa33.15■■■□□ 2.9
SSBP4-205ENST00000598159 NEUROD1Q13562 356 aa33.15■■■□□ 2.9
SSBP4-205ENST00000598159 GPRASP1Q5JY77 1395 aa33.15■■■□□ 2.9
SSBP4-205ENST00000598159 LMOD2Q6P5Q4 547 aa33.15■■■□□ 2.9
SSBP4-205ENST00000598159 HAP1P54257 671 aaPredicted RBP33.14■■■□□ 2.9
SSBP4-205ENST00000598159 NUDT16Q96DE0 195 aaKnown RBP33.14■■■□□ 2.9
SSBP4-205ENST00000598159 CDK19Q9BWU1 502 aa33.14■■■□□ 2.9
SSBP4-205ENST00000598159 NGDNQ8NEJ9 315 aaKnown RBP33.13■■■□□ 2.89
SSBP4-205ENST00000598159 BCL9LQ86UU0 1499 aa33.11■■■□□ 2.89
SSBP4-205ENST00000598159 CABLES1Q8TDN4 633 aa33.1■■■□□ 2.89
SSBP4-205ENST00000598159 ATRNO75882 1429 aa33.1■■■□□ 2.89
SSBP4-205ENST00000598159 UPF1Q92900 1129 aaKnown RBP eCLIP33.09■■■□□ 2.89
SSBP4-205ENST00000598159 RGS12O14924 1447 aa33.07■■■□□ 2.88
SSBP4-205ENST00000598159 UNC5CLQ8IV45 518 aa33.06■■■□□ 2.88
SSBP4-205ENST00000598159 TRIM26Q12899 539 aaPredicted RBP33.05■■■□□ 2.88
SSBP4-205ENST00000598159 CCDC61Q9Y6R9 512 aa33.05■■■□□ 2.88
SSBP4-205ENST00000598159 CENPJQ9HC77 1338 aaPredicted RBP33.04■■■□□ 2.88
SSBP4-205ENST00000598159 ATP7BP35670 1465 aa33.04■■■□□ 2.88
SSBP4-205ENST00000598159 ITSN1Q15811 1721 aa33.03■■■□□ 2.88
SSBP4-205ENST00000598159 TRPM3Q9HCF6 1732 aaPredicted RBP33.03■■■□□ 2.88
SSBP4-205ENST00000598159 PLEKHG5O94827 1062 aa33.03■■■□□ 2.88
SSBP4-205ENST00000598159 GJD4Q96KN9 370 aaPredicted RBP33.03■■■□□ 2.88
SSBP4-205ENST00000598159 SLIT2O94813 1529 aa33.02■■■□□ 2.88
SSBP4-205ENST00000598159 PAK3O75914 559 aaPredicted RBP33.01■■■□□ 2.87
SSBP4-205ENST00000598159 PLEKHG3A1L390 1219 aa32.99■■■□□ 2.87
SSBP4-205ENST00000598159 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.98■■■□□ 2.87
SSBP4-205ENST00000598159 ALS2Q96Q42 1657 aa32.97■■■□□ 2.87
SSBP4-205ENST00000598159 FAM83GA6ND36 823 aa32.96■■■□□ 2.87
SSBP4-205ENST00000598159 SRPK2P78362 688 aaKnown RBP32.96■■■□□ 2.87
SSBP4-205ENST00000598159 NBPF8Q3BBV2 869 aa32.96■■■□□ 2.87
SSBP4-205ENST00000598159 ACEP12821 1306 aa32.96■■■□□ 2.87
SSBP4-205ENST00000598159 POLR3AO14802 1390 aaPredicted RBP32.95■■■□□ 2.86
SSBP4-205ENST00000598159 TRPM1Q7Z4N2 1603 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms