RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 KNDC1Q76NI1 1749 aa32.94■■■□□ 2.86
IRF3-220ENST00000598108 NBPF1Q3BBV0 1214 aa32.92■■■□□ 2.86
IRF3-220ENST00000598108 ORAI2Q96SN7 254 aa32.92■■■□□ 2.86
IRF3-220ENST00000598108 POGKQ9P215 609 aa32.91■■■□□ 2.86
IRF3-220ENST00000598108 DDX17Q92841 729 aaKnown RBP32.9■■■□□ 2.86
IRF3-220ENST00000598108 DISP3Q9P2K9 1392 aa32.9■■■□□ 2.86
IRF3-220ENST00000598108 DLC1Q96QB1 1528 aa32.88■■■□□ 2.85
IRF3-220ENST00000598108 NUTM2FA1L443 756 aa32.88■■■□□ 2.85
IRF3-220ENST00000598108 CDC42BPGQ6DT37 1551 aa32.85■■■□□ 2.85
IRF3-220ENST00000598108 AHDC1Q5TGY3 1603 aaPredicted RBP32.84■■■□□ 2.85
IRF3-220ENST00000598108 PHLPP1O60346 1717 aa32.83■■■□□ 2.85
IRF3-220ENST00000598108 ESCO1Q5FWF5 840 aa32.82■■■□□ 2.84
IRF3-220ENST00000598108 COL16A1Q07092 1604 aaPredicted RBP32.8■■■□□ 2.84
IRF3-220ENST00000598108 HIRIP3Q9BW71 556 aaPredicted RBP32.8■■■□□ 2.84
IRF3-220ENST00000598108 JCADQ9P266 1359 aa32.8■■■□□ 2.84
IRF3-220ENST00000598108 MINK1Q8N4C8 1332 aaPredicted RBP32.79■■■□□ 2.84
IRF3-220ENST00000598108 MED1Q15648 1581 aaPredicted RBP32.79■■■□□ 2.84
IRF3-220ENST00000598108 NBPF8Q3BBV2 869 aa32.77■■■□□ 2.84
IRF3-220ENST00000598108 KIAA1210Q9ULL0 1709 aa32.74■■■□□ 2.83
IRF3-220ENST00000598108 TONSLQ96HA7 1378 aa32.72■■■□□ 2.83
IRF3-220ENST00000598108 FOXO3O43524 673 aa32.72■■■□□ 2.83
IRF3-220ENST00000598108 LRRC59Q96AG4 307 aaKnown RBP32.72■■■□□ 2.83
IRF3-220ENST00000598108 SOS2Q07890 1332 aaPredicted RBP32.71■■■□□ 2.83
IRF3-220ENST00000598108 NHSL1Q5SYE7 1610 aa32.7■■■□□ 2.83
IRF3-220ENST00000598108 WASLO00401 505 aaPredicted RBP32.68■■■□□ 2.82
IRF3-220ENST00000598108 FMN2Q9NZ56 1722 aa32.68■■■□□ 2.82
IRF3-220ENST00000598108 XPCQ01831 940 aaPredicted RBP32.67■■■□□ 2.82
IRF3-220ENST00000598108 ILDR2Q71H61 639 aa32.66■■■□□ 2.82
IRF3-220ENST00000598108 NPHP3Q7Z494 1330 aa32.66■■■□□ 2.82
IRF3-220ENST00000598108 ARHGEF28Q8N1W1 1705 aaKnown RBP32.65■■■□□ 2.82
IRF3-220ENST00000598108 ADGRB2O60241 1585 aa32.64■■■□□ 2.82
IRF3-220ENST00000598108 ROCK2O75116 1388 aaKnown RBP32.64■■■□□ 2.82
IRF3-220ENST00000598108 SPATA31A6Q5VVP1 1343 aa32.64■■■□□ 2.82
IRF3-220ENST00000598108 PHF23Q9BUL5 403 aaPredicted RBP32.64■■■□□ 2.82
IRF3-220ENST00000598108 PRR36Q9H6K5 1346 aa32.64■■■□□ 2.82
IRF3-220ENST00000598108 PHF8Q9UPP1 1060 aa32.64■■■□□ 2.82
IRF3-220ENST00000598108 RGS17Q9UGC6 210 aaPredicted RBP32.61■■■□□ 2.81
IRF3-220ENST00000598108 ANKARQ7Z5J8 1434 aa32.6■■■□□ 2.81
IRF3-220ENST00000598108 PNPLA6Q8IY17 1366 aa32.6■■■□□ 2.81
IRF3-220ENST00000598108 CENPJQ9HC77 1338 aaPredicted RBP32.6■■■□□ 2.81
IRF3-220ENST00000598108 TRPM1Q7Z4N2 1603 aa32.59■■■□□ 2.81
IRF3-220ENST00000598108 NUTM2BA6NNL0 878 aaPredicted RBP32.59■■■□□ 2.81
IRF3-220ENST00000598108 NUTM2EB1AL46 878 aaPredicted RBP32.59■■■□□ 2.81
IRF3-220ENST00000598108 NUTM2AQ8IVF1 878 aaPredicted RBP32.59■■■□□ 2.81
IRF3-220ENST00000598108 PMFBP1Q8TBY8 1022 aa32.59■■■□□ 2.81
IRF3-220ENST00000598108 CDK19Q9BWU1 502 aa32.59■■■□□ 2.81
IRF3-220ENST00000598108 PXDNQ92626 1479 aa32.58■■■□□ 2.81
IRF3-220ENST00000598108 LRP6O75581 1613 aa32.58■■■□□ 2.81
IRF3-220ENST00000598108 KRT28Q7Z3Y7 464 aa32.56■■■□□ 2.8
IRF3-220ENST00000598108 GPRASP1Q5JY77 1395 aa32.56■■■□□ 2.8
IRF3-220ENST00000598108 SHPRHQ149N8 1683 aa32.55■■■□□ 2.8
IRF3-220ENST00000598108 EIF3AQ14152 1382 aaKnown RBP32.55■■■□□ 2.8
IRF3-220ENST00000598108 USP32Q8NFA0 1604 aa32.55■■■□□ 2.8
IRF3-220ENST00000598108 NUDT16Q96DE0 195 aaKnown RBP32.54■■■□□ 2.8
IRF3-220ENST00000598108 CLSPNQ9HAW4 1339 aa32.53■■■□□ 2.8
IRF3-220ENST00000598108 TULP4Q9NRJ4 1543 aa32.53■■■□□ 2.8
IRF3-220ENST00000598108 RGPD8O14715 1765 aaPredicted RBP32.52■■■□□ 2.8
IRF3-220ENST00000598108 CARD11Q9BXL7 1154 aa32.51■■■□□ 2.79
IRF3-220ENST00000598108 PSME1Q06323 249 aa32.5■■■□□ 2.79
IRF3-220ENST00000598108 MEX3CQ5U5Q3 659 aaKnown RBP32.49■■■□□ 2.79
IRF3-220ENST00000598108 CCER1Q8TC90 406 aaPredicted RBP32.48■■■□□ 2.79
IRF3-220ENST00000598108 SPATA31A3Q5VYP0 1347 aa32.48■■■□□ 2.79
IRF3-220ENST00000598108 KIF1AQ12756 1690 aa32.47■■■□□ 2.79
IRF3-220ENST00000598108 RALGAPBQ86X10 1494 aa32.47■■■□□ 2.79
IRF3-220ENST00000598108 ATP7BP35670 1465 aa32.46■■■□□ 2.79
IRF3-220ENST00000598108 CABP2Q9NPB3 220 aa32.45■■■□□ 2.79
IRF3-220ENST00000598108 SRPK2P78362 688 aaKnown RBP32.44■■■□□ 2.78
IRF3-220ENST00000598108 POTEAQ6S8J7 498 aa32.44■■■□□ 2.78
IRF3-220ENST00000598108 CCDC61Q9Y6R9 512 aa32.44■■■□□ 2.78
IRF3-220ENST00000598108 NGDNQ8NEJ9 315 aaKnown RBP32.43■■■□□ 2.78
IRF3-220ENST00000598108 ADAMTS2O95450 1211 aa32.42■■■□□ 2.78
IRF3-220ENST00000598108 TIMELESSQ9UNS1 1208 aa32.41■■■□□ 2.78
IRF3-220ENST00000598108 SBNO1A3KN83 1393 aa32.4■■■□□ 2.78
IRF3-220ENST00000598108 PLEKHG3A1L390 1219 aa32.38■■■□□ 2.77
IRF3-220ENST00000598108 EVC2Q86UK5 1308 aa32.37■■■□□ 2.77
IRF3-220ENST00000598108 C8orf37Q96NL8 207 aa32.37■■■□□ 2.77
IRF3-220ENST00000598108 QRICH2Q9H0J4 1663 aa32.37■■■□□ 2.77
IRF3-220ENST00000598108 TNS3Q68CZ2 1445 aa32.36■■■□□ 2.77
IRF3-220ENST00000598108 LMOD2Q6P5Q4 547 aa32.36■■■□□ 2.77
IRF3-220ENST00000598108 ACEP12821 1306 aa32.34■■■□□ 2.77
IRF3-220ENST00000598108 COL22A1Q8NFW1 1626 aaPredicted RBP32.33■■■□□ 2.77
IRF3-220ENST00000598108 AFF2P51816 1311 aa32.33■■■□□ 2.77
IRF3-220ENST00000598108 PLEKHG5O94827 1062 aa32.32■■■□□ 2.76
IRF3-220ENST00000598108 CABLES1Q8TDN4 633 aa32.32■■■□□ 2.76
IRF3-220ENST00000598108 POLR3AO14802 1390 aaPredicted RBP32.32■■■□□ 2.76
IRF3-220ENST00000598108 CABP1Q9NZU7 370 aa32.31■■■□□ 2.76
IRF3-220ENST00000598108 ZNF772Q68DY9 489 aaPredicted RBP32.3■■■□□ 2.76
IRF3-220ENST00000598108 NGLY1Q96IV0 654 aa32.3■■■□□ 2.76
IRF3-220ENST00000598108 PPIP5K1Q6PFW1 1433 aa32.29■■■□□ 2.76
IRF3-220ENST00000598108 PAK3O75914 559 aaPredicted RBP32.29■■■□□ 2.76
IRF3-220ENST00000598108 ARHGEF10O15013 1369 aa32.29■■■□□ 2.76
IRF3-220ENST00000598108 SBNO2Q9Y2G9 1366 aa32.28■■■□□ 2.76
IRF3-220ENST00000598108 ST20-MTHFSA0A0A6YYL1 179 aa32.27■■■□□ 2.76
IRF3-220ENST00000598108 TOPAZ1Q8N9V7 1692 aa32.25■■■□□ 2.75
IRF3-220ENST00000598108 TRPM3Q9HCF6 1732 aaPredicted RBP32.23■■■□□ 2.75
IRF3-220ENST00000598108 TESK2Q96S53 571 aa32.23■■■□□ 2.75
IRF3-220ENST00000598108 ITSN1Q15811 1721 aa32.23■■■□□ 2.75
IRF3-220ENST00000598108 FNBP4Q8N3X1 1017 aaPredicted RBP32.22■■■□□ 2.75
IRF3-220ENST00000598108 SOCS7O14512 581 aa32.21■■■□□ 2.75
IRF3-220ENST00000598108 HAP1P54257 671 aaPredicted RBP32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms