RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 CDC42BPGQ6DT37 1551 aa25.37■■□□□ 1.65
PNKP-210ENST00000597965 LRPPRCP42704 1394 aaKnown RBP25.36■■□□□ 1.65
PNKP-210ENST00000597965 ESCO1Q5FWF5 840 aa25.35■■□□□ 1.65
PNKP-210ENST00000597965 TECPR2O15040 1411 aa25.33■■□□□ 1.65
PNKP-210ENST00000597965 FOXD1Q16676 465 aa25.33■■□□□ 1.65
PNKP-210ENST00000597965 RGL3Q3MIN7 710 aa25.33■■□□□ 1.65
PNKP-210ENST00000597965 MPHOSPH9Q99550 1183 aa25.33■■□□□ 1.65
PNKP-210ENST00000597965 USP21Q9UK80 565 aa25.32■■□□□ 1.64
PNKP-210ENST00000597965 ADGRF5Q8IZF2 1346 aa25.32■■□□□ 1.64
PNKP-210ENST00000597965 RGS12O14924 1447 aa25.31■■□□□ 1.64
PNKP-210ENST00000597965 SPATA31E1Q6ZUB1 1445 aa25.31■■□□□ 1.64
PNKP-210ENST00000597965 COL22A1Q8NFW1 1626 aaPredicted RBP25.31■■□□□ 1.64
PNKP-210ENST00000597965 TRPC5Q9UL62 973 aaPredicted RBP25.31■■□□□ 1.64
PNKP-210ENST00000597965 FNBP4Q8N3X1 1017 aaPredicted RBP25.3■■□□□ 1.64
PNKP-210ENST00000597965 ABCC11Q96J66 1382 aa25.3■■□□□ 1.64
PNKP-210ENST00000597965 IFT172Q9UG01 1749 aa25.29■■□□□ 1.64
PNKP-210ENST00000597965 STK26Q9P289 416 aa25.28■■□□□ 1.64
PNKP-210ENST00000597965 KNDC1Q76NI1 1749 aa25.26■■□□□ 1.63
PNKP-210ENST00000597965 PIK3C2GO75747 1445 aa25.26■■□□□ 1.63
PNKP-210ENST00000597965 FOXO3O43524 673 aa25.25■■□□□ 1.63
PNKP-210ENST00000597965 ATAD2Q6PL18 1390 aa25.25■■□□□ 1.63
PNKP-210ENST00000597965 PXDNQ92626 1479 aa25.25■■□□□ 1.63
PNKP-210ENST00000597965 WAPLQ7Z5K2 1190 aa25.24■■□□□ 1.63
PNKP-210ENST00000597965 SIRT1Q96EB6 747 aa25.24■■□□□ 1.63
PNKP-210ENST00000597965 MYOM2P54296 1465 aa25.23■■□□□ 1.63
PNKP-210ENST00000597965 YTHDC2Q9H6S0 1430 aaKnown RBP25.21■■□□□ 1.63
PNKP-210ENST00000597965 TMEM132EQ6IEE7 984 aa25.21■■□□□ 1.63
PNKP-210ENST00000597965 KIF1AQ12756 1690 aa25.2■■□□□ 1.63
PNKP-210ENST00000597965 ATRNO75882 1429 aa25.2■■□□□ 1.62
PNKP-210ENST00000597965 MARF1Q9Y4F3 1742 aaKnown RBP25.19■■□□□ 1.62
PNKP-210ENST00000597965 NUTM2FA1L443 756 aa25.18■■□□□ 1.62
PNKP-210ENST00000597965 C14orf93Q9H972 538 aaKnown RBP25.18■■□□□ 1.62
PNKP-210ENST00000597965 DHX57Q6P158 1386 aaKnown RBP25.18■■□□□ 1.62
PNKP-210ENST00000597965 FMN2Q9NZ56 1722 aa25.17■■□□□ 1.62
PNKP-210ENST00000597965 XPCQ01831 940 aaPredicted RBP25.17■■□□□ 1.62
PNKP-210ENST00000597965 PLEKHH1Q9ULM0 1364 aa25.15■■□□□ 1.62
PNKP-210ENST00000597965 PSME1Q06323 249 aa25.14■■□□□ 1.62
PNKP-210ENST00000597965 BCL9LQ86UU0 1499 aa25.14■■□□□ 1.61
PNKP-210ENST00000597965 SPATA31A3Q5VYP0 1347 aa25.13■■□□□ 1.61
PNKP-210ENST00000597965 CCDC125Q86Z20 511 aa25.13■■□□□ 1.61
PNKP-210ENST00000597965 GJD4Q96KN9 370 aaPredicted RBP25.12■■□□□ 1.61
PNKP-210ENST00000597965 NRXN1Q9ULB1 1477 aa25.12■■□□□ 1.61
PNKP-210ENST00000597965 KRT28Q7Z3Y7 464 aa25.11■■□□□ 1.61
PNKP-210ENST00000597965 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.1■■□□□ 1.61
PNKP-210ENST00000597965 HAP1P54257 671 aaPredicted RBP25.09■■□□□ 1.61
PNKP-210ENST00000597965 UNC5CLQ8IV45 518 aa25.09■■□□□ 1.61
PNKP-210ENST00000597965 PHF8Q9UPP1 1060 aa25.09■■□□□ 1.61
PNKP-210ENST00000597965 CFAP70Q5T0N1 1121 aa25.08■■□□□ 1.61
PNKP-210ENST00000597965 POGKQ9P215 609 aa25.06■■□□□ 1.6
PNKP-210ENST00000597965 TNS3Q68CZ2 1445 aa25.05■■□□□ 1.6
PNKP-210ENST00000597965 PRAM1Q96QH2 718 aa25.05■■□□□ 1.6
PNKP-210ENST00000597965 SLIT2O94813 1529 aa25.05■■□□□ 1.6
PNKP-210ENST00000597965 ARHGEF10O15013 1369 aa25.05■■□□□ 1.6
PNKP-210ENST00000597965 USP32Q8NFA0 1604 aa25.04■■□□□ 1.6
PNKP-210ENST00000597965 DLC1Q96QB1 1528 aa25.04■■□□□ 1.6
PNKP-210ENST00000597965 SBNO1A3KN83 1393 aa25.04■■□□□ 1.6
PNKP-210ENST00000597965 STAC3Q96MF2 364 aa25.03■■□□□ 1.6
PNKP-210ENST00000597965 ZRANB1Q9UGI0 708 aa25.03■■□□□ 1.6
PNKP-210ENST00000597965 ANKARQ7Z5J8 1434 aa25.03■■□□□ 1.6
PNKP-210ENST00000597965 RGPD8O14715 1765 aaPredicted RBP25.02■■□□□ 1.6
PNKP-210ENST00000597965 EIF3AQ14152 1382 aaKnown RBP25.02■■□□□ 1.6
PNKP-210ENST00000597965 RAB3GAP2Q9H2M9 1393 aa25.01■■□□□ 1.59
PNKP-210ENST00000597965 RALGAPBQ86X10 1494 aa25■■□□□ 1.59
PNKP-210ENST00000597965 EP400Q96L91 3159 aa25■■□□□ 1.59
PNKP-210ENST00000597965 SAFB2Q14151 953 aaKnown RBP eCLIP24.99■■□□□ 1.59
PNKP-210ENST00000597965 LMOD2Q6P5Q4 547 aa24.98■■□□□ 1.59
PNKP-210ENST00000597965 ADGRB2O60241 1585 aa24.97■■□□□ 1.59
PNKP-210ENST00000597965 NWD2Q9ULI1 1742 aa24.97■■□□□ 1.59
PNKP-210ENST00000597965 VPS72Q15906 364 aa24.96■■□□□ 1.59
PNKP-210ENST00000597965 GPRASP1Q5JY77 1395 aa24.94■■□□□ 1.58
PNKP-210ENST00000597965 GLI3P10071 1580 aa24.94■■□□□ 1.58
PNKP-210ENST00000597965 BLMP54132 1417 aaPredicted RBP24.94■■□□□ 1.58
PNKP-210ENST00000597965 TRAK1Q9UPV9 953 aa24.93■■□□□ 1.58
PNKP-210ENST00000597965 CCDC9Q9Y3X0 531 aaKnown RBP24.93■■□□□ 1.58
PNKP-210ENST00000597965 ADGRB1O14514 1584 aa24.93■■□□□ 1.58
PNKP-210ENST00000597965 SF3B2Q13435 895 aaKnown RBP24.92■■□□□ 1.58
PNKP-210ENST00000597965 PMFBP1Q8TBY8 1022 aa24.92■■□□□ 1.58
PNKP-210ENST00000597965 CABLES1Q8TDN4 633 aa24.92■■□□□ 1.58
PNKP-210ENST00000597965 DCAF11Q8TEB1 546 aa24.92■■□□□ 1.58
PNKP-210ENST00000597965 PLCH1Q4KWH8 1693 aa24.91■■□□□ 1.58
PNKP-210ENST00000597965 HRCP23327 699 aa24.9■■□□□ 1.58
PNKP-210ENST00000597965 SEPT12Q8IYM1 358 aa24.9■■□□□ 1.58
PNKP-210ENST00000597965 ABCA3Q99758 1704 aa24.89■■□□□ 1.58
PNKP-210ENST00000597965 ONECUT3O60422 494 aaPredicted RBP24.89■■□□□ 1.58
PNKP-210ENST00000597965 KDM2AQ9Y2K7 1162 aa24.89■■□□□ 1.58
PNKP-210ENST00000597965 TULP4Q9NRJ4 1543 aa24.87■■□□□ 1.57
PNKP-210ENST00000597965 SRCAPQ6ZRS2 3230 aa24.87■■□□□ 1.57
PNKP-210ENST00000597965 WASLO00401 505 aaPredicted RBP24.87■■□□□ 1.57
PNKP-210ENST00000597965 PLEKHG5O94827 1062 aa24.87■■□□□ 1.57
PNKP-210ENST00000597965 HIRIP3Q9BW71 556 aaPredicted RBP24.87■■□□□ 1.57
PNKP-210ENST00000597965 MINK1Q8N4C8 1332 aaPredicted RBP24.86■■□□□ 1.57
PNKP-210ENST00000597965 BRWD3Q6RI45 1802 aa24.85■■□□□ 1.57
PNKP-210ENST00000597965 FAM83GA6ND36 823 aa24.85■■□□□ 1.57
PNKP-210ENST00000597965 NGDNQ8NEJ9 315 aaKnown RBP24.85■■□□□ 1.57
PNKP-210ENST00000597965 KRT27Q7Z3Y8 459 aa24.84■■□□□ 1.57
PNKP-210ENST00000597965 TRPM3Q9HCF6 1732 aaPredicted RBP24.83■■□□□ 1.57
PNKP-210ENST00000597965 ALS2Q96Q42 1657 aa24.81■■□□□ 1.56
PNKP-210ENST00000597965 COL14A1Q05707 1796 aaKnown RBP24.81■■□□□ 1.56
PNKP-210ENST00000597965 A0A0G2JS52 829 aa24.81■■□□□ 1.56
PNKP-210ENST00000597965 MYT1Q01538 1121 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms