RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 WAPLQ7Z5K2 1190 aa22.49■■□□□ 1.19
XRCC1-206ENST00000597811 PLEKHH1Q9ULM0 1364 aa22.49■■□□□ 1.19
XRCC1-206ENST00000597811 C14orf93Q9H972 538 aaKnown RBP22.48■■□□□ 1.19
XRCC1-206ENST00000597811 CFAP70Q5T0N1 1121 aa22.47■■□□□ 1.19
XRCC1-206ENST00000597811 ORAI2Q96SN7 254 aa22.47■■□□□ 1.19
XRCC1-206ENST00000597811 POTEAQ6S8J7 498 aa22.46■■□□□ 1.19
XRCC1-206ENST00000597811 FMN2Q9NZ56 1722 aa22.45■■□□□ 1.19
XRCC1-206ENST00000597811 LRRC59Q96AG4 307 aaKnown RBP22.43■■□□□ 1.18
XRCC1-206ENST00000597811 RGPD8O14715 1765 aaPredicted RBP22.42■■□□□ 1.18
XRCC1-206ENST00000597811 ADGRB1O14514 1584 aa22.42■■□□□ 1.18
XRCC1-206ENST00000597811 DHX57Q6P158 1386 aaKnown RBP22.41■■□□□ 1.18
XRCC1-206ENST00000597811 PNPLA6Q8IY17 1366 aa22.41■■□□□ 1.18
XRCC1-206ENST00000597811 MEX3CQ5U5Q3 659 aaKnown RBP22.41■■□□□ 1.18
XRCC1-206ENST00000597811 NUTM2BA6NNL0 878 aaPredicted RBP22.4■■□□□ 1.18
XRCC1-206ENST00000597811 NUTM2EB1AL46 878 aaPredicted RBP22.4■■□□□ 1.18
XRCC1-206ENST00000597811 NUTM2AQ8IVF1 878 aaPredicted RBP22.4■■□□□ 1.18
XRCC1-206ENST00000597811 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
XRCC1-206ENST00000597811 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
XRCC1-206ENST00000597811 SOS2Q07890 1332 aaPredicted RBP22.39■■□□□ 1.18
XRCC1-206ENST00000597811 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.17
XRCC1-206ENST00000597811 SIRT1Q96EB6 747 aa22.39■■□□□ 1.17
XRCC1-206ENST00000597811 DLC1Q96QB1 1528 aa22.38■■□□□ 1.17
XRCC1-206ENST00000597811 ESCO1Q5FWF5 840 aa22.38■■□□□ 1.17
XRCC1-206ENST00000597811 NUTM2FA1L443 756 aa22.37■■□□□ 1.17
XRCC1-206ENST00000597811 PXDNQ92626 1479 aa22.35■■□□□ 1.17
XRCC1-206ENST00000597811 NEUROD1Q13562 356 aa22.35■■□□□ 1.17
XRCC1-206ENST00000597811 KIF1AQ12756 1690 aa22.35■■□□□ 1.17
XRCC1-206ENST00000597811 COL22A1Q8NFW1 1626 aaPredicted RBP22.35■■□□□ 1.17
XRCC1-206ENST00000597811 PRAM1Q96QH2 718 aa22.34■■□□□ 1.17
XRCC1-206ENST00000597811 NPHP3Q7Z494 1330 aa22.32■■□□□ 1.16
XRCC1-206ENST00000597811 SAFB2Q14151 953 aaKnown RBP eCLIP22.32■■□□□ 1.16
XRCC1-206ENST00000597811 ADGRB2O60241 1585 aa22.32■■□□□ 1.16
XRCC1-206ENST00000597811 FOXO3O43524 673 aa22.31■■□□□ 1.16
XRCC1-206ENST00000597811 ZNF772Q68DY9 489 aaPredicted RBP22.31■■□□□ 1.16
XRCC1-206ENST00000597811 STAC3Q96MF2 364 aa22.31■■□□□ 1.16
XRCC1-206ENST00000597811 SIN3AQ96ST3 1273 aa22.31■■□□□ 1.16
XRCC1-206ENST00000597811 ARHGEF28Q8N1W1 1705 aaKnown RBP22.31■■□□□ 1.16
XRCC1-206ENST00000597811 USP32Q8NFA0 1604 aa22.3■■□□□ 1.16
XRCC1-206ENST00000597811 XPCQ01831 940 aaPredicted RBP22.29■■□□□ 1.16
XRCC1-206ENST00000597811 TRAK1Q9UPV9 953 aa22.29■■□□□ 1.16
XRCC1-206ENST00000597811 AFF2P51816 1311 aa22.29■■□□□ 1.16
XRCC1-206ENST00000597811 POGKQ9P215 609 aa22.28■■□□□ 1.16
XRCC1-206ENST00000597811 KIAA1210Q9ULL0 1709 aa22.28■■□□□ 1.16
XRCC1-206ENST00000597811 C8orf37Q96NL8 207 aa22.27■■□□□ 1.16
XRCC1-206ENST00000597811 MARF1Q9Y4F3 1742 aaKnown RBP22.27■■□□□ 1.16
XRCC1-206ENST00000597811 ADAMTS2O95450 1211 aa22.25■■□□□ 1.15
XRCC1-206ENST00000597811 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
XRCC1-206ENST00000597811 ANKARQ7Z5J8 1434 aa22.22■■□□□ 1.15
XRCC1-206ENST00000597811 PHF8Q9UPP1 1060 aa22.21■■□□□ 1.15
XRCC1-206ENST00000597811 MINK1Q8N4C8 1332 aaPredicted RBP22.21■■□□□ 1.15
XRCC1-206ENST00000597811 RXRBP28702 533 aa22.19■■□□□ 1.14
XRCC1-206ENST00000597811 L3MBTL2Q969R5 705 aa22.19■■□□□ 1.14
XRCC1-206ENST00000597811 NGLY1Q96IV0 654 aa22.19■■□□□ 1.14
XRCC1-206ENST00000597811 SPATA31A3Q5VYP0 1347 aa22.19■■□□□ 1.14
XRCC1-206ENST00000597811 TULP4Q9NRJ4 1543 aa22.19■■□□□ 1.14
XRCC1-206ENST00000597811 KRT28Q7Z3Y7 464 aa22.18■■□□□ 1.14
XRCC1-206ENST00000597811 CDK12Q9NYV4 1490 aaPredicted RBP22.16■■□□□ 1.14
XRCC1-206ENST00000597811 ITSN1Q15811 1721 aa22.16■■□□□ 1.14
XRCC1-206ENST00000597811 ABCA3Q99758 1704 aa22.16■■□□□ 1.14
XRCC1-206ENST00000597811 TRPM3Q9HCF6 1732 aaPredicted RBP22.16■■□□□ 1.14
XRCC1-206ENST00000597811 TNS3Q68CZ2 1445 aa22.15■■□□□ 1.14
XRCC1-206ENST00000597811 PRR36Q9H6K5 1346 aa22.15■■□□□ 1.14
XRCC1-206ENST00000597811 WASLO00401 505 aaPredicted RBP22.15■■□□□ 1.14
XRCC1-206ENST00000597811 PMFBP1Q8TBY8 1022 aa22.15■■□□□ 1.14
XRCC1-206ENST00000597811 QTRT2Q9H974 415 aaKnown RBP22.15■■□□□ 1.14
XRCC1-206ENST00000597811 EIF3AQ14152 1382 aaKnown RBP22.14■■□□□ 1.14
XRCC1-206ENST00000597811 NBPF1Q3BBV0 1214 aa22.14■■□□□ 1.13
XRCC1-206ENST00000597811 TONSLQ96HA7 1378 aa22.13■■□□□ 1.13
XRCC1-206ENST00000597811 FNBP4Q8N3X1 1017 aaPredicted RBP22.13■■□□□ 1.13
XRCC1-206ENST00000597811 PSME1Q06323 249 aa22.12■■□□□ 1.13
XRCC1-206ENST00000597811 USP21Q9UK80 565 aa22.12■■□□□ 1.13
XRCC1-206ENST00000597811 SBNO1A3KN83 1393 aa22.12■■□□□ 1.13
XRCC1-206ENST00000597811 ALS2Q96Q42 1657 aa22.11■■□□□ 1.13
XRCC1-206ENST00000597811 ATP7BP35670 1465 aa22.11■■□□□ 1.13
XRCC1-206ENST00000597811 RBM6P78332 1123 aaKnown RBP22.11■■□□□ 1.13
XRCC1-206ENST00000597811 RGS12O14924 1447 aa22.11■■□□□ 1.13
XRCC1-206ENST00000597811 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.11■■□□□ 1.13
XRCC1-206ENST00000597811 TOPAZ1Q8N9V7 1692 aa22.1■■□□□ 1.13
XRCC1-206ENST00000597811 TRPM1Q7Z4N2 1603 aa22.09■■□□□ 1.13
XRCC1-206ENST00000597811 BCL9LQ86UU0 1499 aa22.09■■□□□ 1.13
XRCC1-206ENST00000597811 ATRNO75882 1429 aa22.08■■□□□ 1.13
XRCC1-206ENST00000597811 CCER1Q8TC90 406 aaPredicted RBP22.08■■□□□ 1.13
XRCC1-206ENST00000597811 QRICH2Q9H0J4 1663 aa22.07■■□□□ 1.12
XRCC1-206ENST00000597811 ARHGEF10O15013 1369 aa22.07■■□□□ 1.12
XRCC1-206ENST00000597811 CABLES1Q8TDN4 633 aa22.06■■□□□ 1.12
XRCC1-206ENST00000597811 TRPC5Q9UL62 973 aaPredicted RBP22.06■■□□□ 1.12
XRCC1-206ENST00000597811 PLCH1Q4KWH8 1693 aa22.06■■□□□ 1.12
XRCC1-206ENST00000597811 LMOD2Q6P5Q4 547 aa22.05■■□□□ 1.12
XRCC1-206ENST00000597811 CRYBG1Q9Y4K1 1723 aa22.05■■□□□ 1.12
XRCC1-206ENST00000597811 SLIT2O94813 1529 aa22.05■■□□□ 1.12
XRCC1-206ENST00000597811 GPRASP1Q5JY77 1395 aa22.04■■□□□ 1.12
XRCC1-206ENST00000597811 PLEKHG5O94827 1062 aa22.04■■□□□ 1.12
XRCC1-206ENST00000597811 NUDT16Q96DE0 195 aaKnown RBP22.04■■□□□ 1.12
XRCC1-206ENST00000597811 CDK19Q9BWU1 502 aa22.04■■□□□ 1.12
XRCC1-206ENST00000597811 EP400Q96L91 3159 aa22.03■■□□□ 1.12
XRCC1-206ENST00000597811 NWD2Q9ULI1 1742 aa22.03■■□□□ 1.12
XRCC1-206ENST00000597811 NGDNQ8NEJ9 315 aaKnown RBP22.02■■□□□ 1.12
XRCC1-206ENST00000597811 UPF1Q92900 1129 aaKnown RBP eCLIP22.02■■□□□ 1.12
XRCC1-206ENST00000597811 HAP1P54257 671 aaPredicted RBP22.01■■□□□ 1.11
XRCC1-206ENST00000597811 CENPJQ9HC77 1338 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms