RNA–Protein interactions for RNA: ENST00000597646.5

COPE-207, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 868 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-207ENST00000597646 C14orf93Q9H972 538 aaKnown RBP29.25■■■□□ 2.27
COPE-207ENST00000597646 ABCC11Q96J66 1382 aa29.25■■■□□ 2.27
COPE-207ENST00000597646 NUTM2FA1L443 756 aa29.24■■■□□ 2.27
COPE-207ENST00000597646 HRCP23327 699 aa29.24■■■□□ 2.27
COPE-207ENST00000597646 YTHDC2Q9H6S0 1430 aaKnown RBP29.23■■■□□ 2.27
COPE-207ENST00000597646 KDM2AQ9Y2K7 1162 aa29.23■■■□□ 2.27
COPE-207ENST00000597646 TECPR2O15040 1411 aa29.21■■■□□ 2.27
COPE-207ENST00000597646 ZNF772Q68DY9 489 aaPredicted RBP29.21■■■□□ 2.27
COPE-207ENST00000597646 DHX57Q6P158 1386 aaKnown RBP29.21■■■□□ 2.27
COPE-207ENST00000597646 PLEKHH1Q9ULM0 1364 aa29.21■■■□□ 2.27
COPE-207ENST00000597646 MYOM2P54296 1465 aa29.21■■■□□ 2.27
COPE-207ENST00000597646 DCAF11Q8TEB1 546 aa29.19■■■□□ 2.26
COPE-207ENST00000597646 KNDC1Q76NI1 1749 aa29.19■■■□□ 2.26
COPE-207ENST00000597646 CDC42BPGQ6DT37 1551 aa29.18■■■□□ 2.26
COPE-207ENST00000597646 PNPLA6Q8IY17 1366 aa29.18■■■□□ 2.26
COPE-207ENST00000597646 NRXN1Q9ULB1 1477 aa29.17■■■□□ 2.26
COPE-207ENST00000597646 SAFB2Q14151 953 aaKnown RBP eCLIP29.16■■■□□ 2.26
COPE-207ENST00000597646 LAMC1P11047 1609 aa29.16■■■□□ 2.26
COPE-207ENST00000597646 SOS2Q07890 1332 aaPredicted RBP29.15■■■□□ 2.26
COPE-207ENST00000597646 C8orf37Q96NL8 207 aa29.14■■■□□ 2.26
COPE-207ENST00000597646 SIRT1Q96EB6 747 aa29.13■■■□□ 2.25
COPE-207ENST00000597646 NPHP3Q7Z494 1330 aa29.13■■■□□ 2.25
COPE-207ENST00000597646 FOXO3O43524 673 aa29.12■■■□□ 2.25
COPE-207ENST00000597646 XPCQ01831 940 aaPredicted RBP29.12■■■□□ 2.25
COPE-207ENST00000597646 POGKQ9P215 609 aa29.12■■■□□ 2.25
COPE-207ENST00000597646 ADAMTS2O95450 1211 aa29.11■■■□□ 2.25
COPE-207ENST00000597646 PRAM1Q96QH2 718 aa29.11■■■□□ 2.25
COPE-207ENST00000597646 AFF2P51816 1311 aa29.11■■■□□ 2.25
COPE-207ENST00000597646 NGLY1Q96IV0 654 aa29.07■■■□□ 2.24
COPE-207ENST00000597646 TRAK1Q9UPV9 953 aa29.07■■■□□ 2.24
COPE-207ENST00000597646 RXRBP28702 533 aa29.06■■■□□ 2.24
COPE-207ENST00000597646 FMN2Q9NZ56 1722 aa29.06■■■□□ 2.24
COPE-207ENST00000597646 STAC3Q96MF2 364 aa29.04■■■□□ 2.24
COPE-207ENST00000597646 QTRT2Q9H974 415 aaKnown RBP29■■■□□ 2.23
COPE-207ENST00000597646 PXDNQ92626 1479 aa28.99■■■□□ 2.23
COPE-207ENST00000597646 DLC1Q96QB1 1528 aa28.99■■■□□ 2.23
COPE-207ENST00000597646 RGPD8O14715 1765 aaPredicted RBP28.98■■■□□ 2.23
COPE-207ENST00000597646 ADGRB1O14514 1584 aa28.98■■■□□ 2.23
COPE-207ENST00000597646 HIRIP3Q9BW71 556 aaPredicted RBP28.98■■■□□ 2.23
COPE-207ENST00000597646 PHF8Q9UPP1 1060 aa28.98■■■□□ 2.23
COPE-207ENST00000597646 MINK1Q8N4C8 1332 aaPredicted RBP28.97■■■□□ 2.23
COPE-207ENST00000597646 KRT28Q7Z3Y7 464 aa28.97■■■□□ 2.23
COPE-207ENST00000597646 KIF1AQ12756 1690 aa28.96■■■□□ 2.23
COPE-207ENST00000597646 COL22A1Q8NFW1 1626 aaPredicted RBP28.94■■■□□ 2.22
COPE-207ENST00000597646 PSME1Q06323 249 aa28.93■■■□□ 2.22
COPE-207ENST00000597646 USP21Q9UK80 565 aa28.93■■■□□ 2.22
COPE-207ENST00000597646 PLEKHG5O94827 1062 aa28.92■■■□□ 2.22
COPE-207ENST00000597646 PMFBP1Q8TBY8 1022 aa28.92■■■□□ 2.22
COPE-207ENST00000597646 RBM6P78332 1123 aaKnown RBP28.91■■■□□ 2.22
COPE-207ENST00000597646 LMOD2Q6P5Q4 547 aa28.91■■■□□ 2.22
COPE-207ENST00000597646 SPATA31A3Q5VYP0 1347 aa28.9■■■□□ 2.22
COPE-207ENST00000597646 HAP1P54257 671 aaPredicted RBP28.89■■■□□ 2.22
COPE-207ENST00000597646 ANKARQ7Z5J8 1434 aa28.86■■■□□ 2.21
COPE-207ENST00000597646 ADGRB2O60241 1585 aa28.85■■■□□ 2.21
COPE-207ENST00000597646 WASLO00401 505 aaPredicted RBP28.85■■■□□ 2.21
COPE-207ENST00000597646 TRPC5Q9UL62 973 aaPredicted RBP28.85■■■□□ 2.21
COPE-207ENST00000597646 FNBP4Q8N3X1 1017 aaPredicted RBP28.84■■■□□ 2.21
COPE-207ENST00000597646 EIF3AQ14152 1382 aaKnown RBP28.84■■■□□ 2.21
COPE-207ENST00000597646 CDK12Q9NYV4 1490 aaPredicted RBP28.84■■■□□ 2.21
COPE-207ENST00000597646 USP32Q8NFA0 1604 aa28.82■■■□□ 2.2
COPE-207ENST00000597646 MARF1Q9Y4F3 1742 aaKnown RBP28.81■■■□□ 2.2
COPE-207ENST00000597646 TNS3Q68CZ2 1445 aa28.81■■■□□ 2.2
COPE-207ENST00000597646 ARHGEF28Q8N1W1 1705 aaKnown RBP28.8■■■□□ 2.2
COPE-207ENST00000597646 CABLES1Q8TDN4 633 aa28.8■■■□□ 2.2
COPE-207ENST00000597646 NBPF1Q3BBV0 1214 aa28.79■■■□□ 2.2
COPE-207ENST00000597646 UPF1Q92900 1129 aaKnown RBP eCLIP28.79■■■□□ 2.2
COPE-207ENST00000597646 RGS12O14924 1447 aa28.78■■■□□ 2.2
COPE-207ENST00000597646 SBNO1A3KN83 1393 aa28.78■■■□□ 2.2
COPE-207ENST00000597646 GPRASP1Q5JY77 1395 aa28.78■■■□□ 2.2
COPE-207ENST00000597646 PRR36Q9H6K5 1346 aa28.78■■■□□ 2.2
COPE-207ENST00000597646 NEUROD1Q13562 356 aa28.78■■■□□ 2.2
COPE-207ENST00000597646 NGDNQ8NEJ9 315 aaKnown RBP28.78■■■□□ 2.2
COPE-207ENST00000597646 TULP4Q9NRJ4 1543 aa28.78■■■□□ 2.2
COPE-207ENST00000597646 SIN3AQ96ST3 1273 aa28.77■■■□□ 2.2
COPE-207ENST00000597646 KIAA1210Q9ULL0 1709 aa28.76■■■□□ 2.19
COPE-207ENST00000597646 ARHGEF10O15013 1369 aa28.75■■■□□ 2.19
COPE-207ENST00000597646 ATRNO75882 1429 aa28.73■■■□□ 2.19
COPE-207ENST00000597646 PAK3O75914 559 aaPredicted RBP28.73■■■□□ 2.19
COPE-207ENST00000597646 L3MBTL2Q969R5 705 aa28.73■■■□□ 2.19
COPE-207ENST00000597646 NUDT16Q96DE0 195 aaKnown RBP28.73■■■□□ 2.19
COPE-207ENST00000597646 CDK19Q9BWU1 502 aa28.73■■■□□ 2.19
COPE-207ENST00000597646 BCL9LQ86UU0 1499 aa28.72■■■□□ 2.19
COPE-207ENST00000597646 UNC5CLQ8IV45 518 aa28.7■■■□□ 2.18
COPE-207ENST00000597646 GJD4Q96KN9 370 aaPredicted RBP28.68■■■□□ 2.18
COPE-207ENST00000597646 ITSN1Q15811 1721 aa28.66■■■□□ 2.18
COPE-207ENST00000597646 CCDC9Q9Y3X0 531 aaKnown RBP28.65■■■□□ 2.18
COPE-207ENST00000597646 TRPM3Q9HCF6 1732 aaPredicted RBP28.65■■■□□ 2.18
COPE-207ENST00000597646 SLIT2O94813 1529 aa28.64■■■□□ 2.18
COPE-207ENST00000597646 ATP7BP35670 1465 aa28.64■■■□□ 2.17
COPE-207ENST00000597646 CENPJQ9HC77 1338 aaPredicted RBP28.64■■■□□ 2.17
COPE-207ENST00000597646 SRPK2P78362 688 aaKnown RBP28.63■■■□□ 2.17
COPE-207ENST00000597646 ABCA3Q99758 1704 aa28.62■■■□□ 2.17
COPE-207ENST00000597646 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.61■■■□□ 2.17
COPE-207ENST00000597646 CCDC61Q9Y6R9 512 aa28.61■■■□□ 2.17
COPE-207ENST00000597646 ATAD2Q6PL18 1390 aa28.61■■■□□ 2.17
COPE-207ENST00000597646 FAM83GA6ND36 823 aa28.6■■■□□ 2.17
COPE-207ENST00000597646 ALS2Q96Q42 1657 aa28.59■■■□□ 2.17
COPE-207ENST00000597646 ACEP12821 1306 aa28.58■■■□□ 2.17
COPE-207ENST00000597646 PLCH1Q4KWH8 1693 aa28.58■■■□□ 2.16
COPE-207ENST00000597646 CABP2Q9NPB3 220 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms