RNA–Protein interactions for RNA: ENST00000597069.1

ZC3H4-204, Transcript of zinc finger CCCH-type containing 4, humanhuman

TSL 4

Gene ZC3H4, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-204ENST00000597069 COL16A1Q07092 1604 aaPredicted RBP19.14■□□□□ 0.65
ZC3H4-204ENST00000597069 SPATA31A6Q5VVP1 1343 aa19.12■□□□□ 0.65
ZC3H4-204ENST00000597069 LRRC59Q96AG4 307 aaKnown RBP19.12■□□□□ 0.65
ZC3H4-204ENST00000597069 PLEKHH1Q9ULM0 1364 aa19.1■□□□□ 0.65
ZC3H4-204ENST00000597069 NHSL1Q5SYE7 1610 aa19.1■□□□□ 0.65
ZC3H4-204ENST00000597069 PRAM1Q96QH2 718 aa19.09■□□□□ 0.65
ZC3H4-204ENST00000597069 ORAI2Q96SN7 254 aa19.08■□□□□ 0.64
ZC3H4-204ENST00000597069 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
ZC3H4-204ENST00000597069 POGKQ9P215 609 aa19.08■□□□□ 0.64
ZC3H4-204ENST00000597069 KIAA1210Q9ULL0 1709 aa19.08■□□□□ 0.64
ZC3H4-204ENST00000597069 SOS2Q07890 1332 aaPredicted RBP19.07■□□□□ 0.64
ZC3H4-204ENST00000597069 TRAK1Q9UPV9 953 aa19.06■□□□□ 0.64
ZC3H4-204ENST00000597069 NPHP3Q7Z494 1330 aa19.05■□□□□ 0.64
ZC3H4-204ENST00000597069 SHPRHQ149N8 1683 aa19.05■□□□□ 0.64
ZC3H4-204ENST00000597069 ESCO1Q5FWF5 840 aa19.05■□□□□ 0.64
ZC3H4-204ENST00000597069 ILDR2Q71H61 639 aa19.05■□□□□ 0.64
ZC3H4-204ENST00000597069 L3MBTL2Q969R5 705 aa19.05■□□□□ 0.64
ZC3H4-204ENST00000597069 SIN3AQ96ST3 1273 aa19.04■□□□□ 0.64
ZC3H4-204ENST00000597069 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
ZC3H4-204ENST00000597069 ADGRB2O60241 1585 aa19.02■□□□□ 0.63
ZC3H4-204ENST00000597069 ANKARQ7Z5J8 1434 aa19.01■□□□□ 0.63
ZC3H4-204ENST00000597069 EIF3AQ14152 1382 aaKnown RBP19.01■□□□□ 0.63
ZC3H4-204ENST00000597069 DDX17Q92841 729 aaKnown RBP19■□□□□ 0.63
ZC3H4-204ENST00000597069 FOXO3O43524 673 aa18.99■□□□□ 0.63
ZC3H4-204ENST00000597069 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
ZC3H4-204ENST00000597069 SAFB2Q14151 953 aaKnown RBP eCLIP18.99■□□□□ 0.63
ZC3H4-204ENST00000597069 RGS17Q9UGC6 210 aaPredicted RBP18.99■□□□□ 0.63
ZC3H4-204ENST00000597069 PNPLA6Q8IY17 1366 aa18.98■□□□□ 0.63
ZC3H4-204ENST00000597069 NUTM2FA1L443 756 aa18.97■□□□□ 0.63
ZC3H4-204ENST00000597069 WASLO00401 505 aaPredicted RBP18.97■□□□□ 0.63
ZC3H4-204ENST00000597069 NBPF1Q3BBV0 1214 aa18.97■□□□□ 0.63
ZC3H4-204ENST00000597069 KIF1AQ12756 1690 aa18.97■□□□□ 0.63
ZC3H4-204ENST00000597069 PHF8Q9UPP1 1060 aa18.96■□□□□ 0.63
ZC3H4-204ENST00000597069 ARHGEF28Q8N1W1 1705 aaKnown RBP18.95■□□□□ 0.62
ZC3H4-204ENST00000597069 SOCS7O14512 581 aa18.95■□□□□ 0.62
ZC3H4-204ENST00000597069 PXDNQ92626 1479 aa18.95■□□□□ 0.62
ZC3H4-204ENST00000597069 LRP6O75581 1613 aa18.94■□□□□ 0.62
ZC3H4-204ENST00000597069 MINK1Q8N4C8 1332 aaPredicted RBP18.94■□□□□ 0.62
ZC3H4-204ENST00000597069 PSME1Q06323 249 aa18.93■□□□□ 0.62
ZC3H4-204ENST00000597069 MEX3CQ5U5Q3 659 aaKnown RBP18.93■□□□□ 0.62
ZC3H4-204ENST00000597069 TULP4Q9NRJ4 1543 aa18.92■□□□□ 0.62
ZC3H4-204ENST00000597069 ZNF772Q68DY9 489 aaPredicted RBP18.92■□□□□ 0.62
ZC3H4-204ENST00000597069 HIRIP3Q9BW71 556 aaPredicted RBP18.92■□□□□ 0.62
ZC3H4-204ENST00000597069 KRT28Q7Z3Y7 464 aa18.91■□□□□ 0.62
ZC3H4-204ENST00000597069 COL22A1Q8NFW1 1626 aaPredicted RBP18.9■□□□□ 0.62
ZC3H4-204ENST00000597069 NUTM2BA6NNL0 878 aaPredicted RBP18.9■□□□□ 0.62
ZC3H4-204ENST00000597069 NUTM2EB1AL46 878 aaPredicted RBP18.9■□□□□ 0.62
ZC3H4-204ENST00000597069 NUTM2AQ8IVF1 878 aaPredicted RBP18.9■□□□□ 0.62
ZC3H4-204ENST00000597069 SPATA31A3Q5VYP0 1347 aa18.9■□□□□ 0.62
ZC3H4-204ENST00000597069 TONSLQ96HA7 1378 aa18.9■□□□□ 0.62
ZC3H4-204ENST00000597069 TRPM1Q7Z4N2 1603 aa18.89■□□□□ 0.62
ZC3H4-204ENST00000597069 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
ZC3H4-204ENST00000597069 CENPJQ9HC77 1338 aaPredicted RBP18.89■□□□□ 0.61
ZC3H4-204ENST00000597069 SBNO1A3KN83 1393 aa18.89■□□□□ 0.61
ZC3H4-204ENST00000597069 USP32Q8NFA0 1604 aa18.89■□□□□ 0.61
ZC3H4-204ENST00000597069 RGPD8O14715 1765 aaPredicted RBP18.88■□□□□ 0.61
ZC3H4-204ENST00000597069 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
ZC3H4-204ENST00000597069 PRR36Q9H6K5 1346 aa18.88■□□□□ 0.61
ZC3H4-204ENST00000597069 GPRASP1Q5JY77 1395 aa18.88■□□□□ 0.61
ZC3H4-204ENST00000597069 ROCK2O75116 1388 aaKnown RBP18.87■□□□□ 0.61
ZC3H4-204ENST00000597069 CDK19Q9BWU1 502 aa18.87■□□□□ 0.61
ZC3H4-204ENST00000597069 XPCQ01831 940 aaPredicted RBP18.86■□□□□ 0.61
ZC3H4-204ENST00000597069 NUDT16Q96DE0 195 aaKnown RBP18.86■□□□□ 0.61
ZC3H4-204ENST00000597069 CCDC61Q9Y6R9 512 aa18.86■□□□□ 0.61
ZC3H4-204ENST00000597069 NBPF8Q3BBV2 869 aa18.85■□□□□ 0.61
ZC3H4-204ENST00000597069 PMFBP1Q8TBY8 1022 aa18.84■□□□□ 0.61
ZC3H4-204ENST00000597069 TIMELESSQ9UNS1 1208 aa18.84■□□□□ 0.61
ZC3H4-204ENST00000597069 ATP7BP35670 1465 aa18.84■□□□□ 0.61
ZC3H4-204ENST00000597069 TNS3Q68CZ2 1445 aa18.83■□□□□ 0.61
ZC3H4-204ENST00000597069 ARHGEF10O15013 1369 aa18.83■□□□□ 0.61
ZC3H4-204ENST00000597069 PLEKHG3A1L390 1219 aa18.83■□□□□ 0.6
ZC3H4-204ENST00000597069 FNBP4Q8N3X1 1017 aaPredicted RBP18.82■□□□□ 0.6
ZC3H4-204ENST00000597069 NGDNQ8NEJ9 315 aaKnown RBP18.82■□□□□ 0.6
ZC3H4-204ENST00000597069 AFF2P51816 1311 aa18.81■□□□□ 0.6
ZC3H4-204ENST00000597069 ITSN1Q15811 1721 aa18.81■□□□□ 0.6
ZC3H4-204ENST00000597069 NGLY1Q96IV0 654 aa18.81■□□□□ 0.6
ZC3H4-204ENST00000597069 C8orf37Q96NL8 207 aa18.81■□□□□ 0.6
ZC3H4-204ENST00000597069 ADAMTS2O95450 1211 aa18.8■□□□□ 0.6
ZC3H4-204ENST00000597069 POLR3AO14802 1390 aaPredicted RBP18.8■□□□□ 0.6
ZC3H4-204ENST00000597069 RALGAPBQ86X10 1494 aa18.79■□□□□ 0.6
ZC3H4-204ENST00000597069 PCGF6Q9BYE7 350 aa18.79■□□□□ 0.6
ZC3H4-204ENST00000597069 SBNO2Q9Y2G9 1366 aa18.79■□□□□ 0.6
ZC3H4-204ENST00000597069 EVC2Q86UK5 1308 aa18.78■□□□□ 0.6
ZC3H4-204ENST00000597069 SRPK2P78362 688 aaKnown RBP18.78■□□□□ 0.6
ZC3H4-204ENST00000597069 CARD11Q9BXL7 1154 aa18.78■□□□□ 0.6
ZC3H4-204ENST00000597069 QRICH2Q9H0J4 1663 aa18.77■□□□□ 0.6
ZC3H4-204ENST00000597069 RXRBP28702 533 aa18.77■□□□□ 0.6
ZC3H4-204ENST00000597069 BRD4O60885 1362 aaPredicted RBP18.77■□□□□ 0.6
ZC3H4-204ENST00000597069 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
ZC3H4-204ENST00000597069 TRPM3Q9HCF6 1732 aaPredicted RBP18.76■□□□□ 0.59
ZC3H4-204ENST00000597069 CDK12Q9NYV4 1490 aaPredicted RBP18.76■□□□□ 0.59
ZC3H4-204ENST00000597069 ACEP12821 1306 aa18.75■□□□□ 0.59
ZC3H4-204ENST00000597069 QTRT2Q9H974 415 aaKnown RBP18.75■□□□□ 0.59
ZC3H4-204ENST00000597069 TOPAZ1Q8N9V7 1692 aa18.75■□□□□ 0.59
ZC3H4-204ENST00000597069 RBM6P78332 1123 aaKnown RBP18.74■□□□□ 0.59
ZC3H4-204ENST00000597069 USP21Q9UK80 565 aa18.74■□□□□ 0.59
ZC3H4-204ENST00000597069 TRPC5Q9UL62 973 aaPredicted RBP18.74■□□□□ 0.59
ZC3H4-204ENST00000597069 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
ZC3H4-204ENST00000597069 LMOD2Q6P5Q4 547 aa18.73■□□□□ 0.59
ZC3H4-204ENST00000597069 CABP2Q9NPB3 220 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms