RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 DLC1Q96QB1 1528 aa17.13■□□□□ 0.33
SYMPK-207ENST00000596824 STK26Q9P289 416 aa17.13■□□□□ 0.33
SYMPK-207ENST00000596824 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
SYMPK-207ENST00000596824 PLEKHH1Q9ULM0 1364 aa17.13■□□□□ 0.33
SYMPK-207ENST00000596824 SOCS7O14512 581 aa17.12■□□□□ 0.33
SYMPK-207ENST00000596824 CFAP70Q5T0N1 1121 aa17.11■□□□□ 0.33
SYMPK-207ENST00000596824 RGS17Q9UGC6 210 aaPredicted RBP17.11■□□□□ 0.33
SYMPK-207ENST00000596824 ADGRB2O60241 1585 aa17.11■□□□□ 0.33
SYMPK-207ENST00000596824 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
SYMPK-207ENST00000596824 WAPLQ7Z5K2 1190 aa17.1■□□□□ 0.33
SYMPK-207ENST00000596824 SPATA31A6Q5VVP1 1343 aa17.1■□□□□ 0.33
SYMPK-207ENST00000596824 DHX57Q6P158 1386 aaKnown RBP17.1■□□□□ 0.33
SYMPK-207ENST00000596824 COL22A1Q8NFW1 1626 aaPredicted RBP17.1■□□□□ 0.33
SYMPK-207ENST00000596824 USP32Q8NFA0 1604 aa17.08■□□□□ 0.32
SYMPK-207ENST00000596824 DDX17Q92841 729 aaKnown RBP17.08■□□□□ 0.32
SYMPK-207ENST00000596824 DCAF11Q8TEB1 546 aa17.07■□□□□ 0.32
SYMPK-207ENST00000596824 SIRT1Q96EB6 747 aa17.07■□□□□ 0.32
SYMPK-207ENST00000596824 ORAI2Q96SN7 254 aa17.07■□□□□ 0.32
SYMPK-207ENST00000596824 PNPLA6Q8IY17 1366 aa17.05■□□□□ 0.32
SYMPK-207ENST00000596824 STAC3Q96MF2 364 aa17.05■□□□□ 0.32
SYMPK-207ENST00000596824 KDM2AQ9Y2K7 1162 aa17.05■□□□□ 0.32
SYMPK-207ENST00000596824 PXDNQ92626 1479 aa17.05■□□□□ 0.32
SYMPK-207ENST00000596824 LRRC59Q96AG4 307 aaKnown RBP17.04■□□□□ 0.32
SYMPK-207ENST00000596824 ITSN1Q15811 1721 aa17.04■□□□□ 0.32
SYMPK-207ENST00000596824 SOS2Q07890 1332 aaPredicted RBP17.03■□□□□ 0.32
SYMPK-207ENST00000596824 ESCO1Q5FWF5 840 aa17.01■□□□□ 0.31
SYMPK-207ENST00000596824 POTEAQ6S8J7 498 aa17.01■□□□□ 0.31
SYMPK-207ENST00000596824 PRAM1Q96QH2 718 aa17.01■□□□□ 0.31
SYMPK-207ENST00000596824 ABCA3Q99758 1704 aa17.01■□□□□ 0.31
SYMPK-207ENST00000596824 TRPM1Q7Z4N2 1603 aa16.99■□□□□ 0.31
SYMPK-207ENST00000596824 NUTM2FA1L443 756 aa16.99■□□□□ 0.31
SYMPK-207ENST00000596824 MEX3CQ5U5Q3 659 aaKnown RBP16.99■□□□□ 0.31
SYMPK-207ENST00000596824 TRPM3Q9HCF6 1732 aaPredicted RBP16.99■□□□□ 0.31
SYMPK-207ENST00000596824 NPHP3Q7Z494 1330 aa16.98■□□□□ 0.31
SYMPK-207ENST00000596824 NUTM2BA6NNL0 878 aaPredicted RBP16.98■□□□□ 0.31
SYMPK-207ENST00000596824 NUTM2EB1AL46 878 aaPredicted RBP16.98■□□□□ 0.31
SYMPK-207ENST00000596824 NUTM2AQ8IVF1 878 aaPredicted RBP16.98■□□□□ 0.31
SYMPK-207ENST00000596824 TOPAZ1Q8N9V7 1692 aa16.97■□□□□ 0.31
SYMPK-207ENST00000596824 SAFB2Q14151 953 aaKnown RBP eCLIP16.97■□□□□ 0.31
SYMPK-207ENST00000596824 TRAK1Q9UPV9 953 aa16.97■□□□□ 0.31
SYMPK-207ENST00000596824 QRICH2Q9H0J4 1663 aa16.97■□□□□ 0.31
SYMPK-207ENST00000596824 ANKARQ7Z5J8 1434 aa16.96■□□□□ 0.31
SYMPK-207ENST00000596824 TULP4Q9NRJ4 1543 aa16.96■□□□□ 0.31
SYMPK-207ENST00000596824 POGKQ9P215 609 aa16.96■□□□□ 0.31
SYMPK-207ENST00000596824 ALS2Q96Q42 1657 aa16.94■□□□□ 0.3
SYMPK-207ENST00000596824 FOXO3O43524 673 aa16.94■□□□□ 0.3
SYMPK-207ENST00000596824 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.93■□□□□ 0.3
SYMPK-207ENST00000596824 XPCQ01831 940 aaPredicted RBP16.93■□□□□ 0.3
SYMPK-207ENST00000596824 ZNF772Q68DY9 489 aaPredicted RBP16.92■□□□□ 0.3
SYMPK-207ENST00000596824 CRYBG1Q9Y4K1 1723 aa16.92■□□□□ 0.3
SYMPK-207ENST00000596824 AFF2P51816 1311 aa16.92■□□□□ 0.3
SYMPK-207ENST00000596824 MINK1Q8N4C8 1332 aaPredicted RBP16.92■□□□□ 0.3
SYMPK-207ENST00000596824 PHF8Q9UPP1 1060 aa16.91■□□□□ 0.3
SYMPK-207ENST00000596824 PLCH1Q4KWH8 1693 aa16.91■□□□□ 0.3
SYMPK-207ENST00000596824 EIF3AQ14152 1382 aaKnown RBP16.9■□□□□ 0.3
SYMPK-207ENST00000596824 SIN3AQ96ST3 1273 aa16.9■□□□□ 0.3
SYMPK-207ENST00000596824 HIRIP3Q9BW71 556 aaPredicted RBP16.9■□□□□ 0.3
SYMPK-207ENST00000596824 ATP7BP35670 1465 aa16.89■□□□□ 0.29
SYMPK-207ENST00000596824 TNS3Q68CZ2 1445 aa16.88■□□□□ 0.29
SYMPK-207ENST00000596824 L3MBTL2Q969R5 705 aa16.88■□□□□ 0.29
SYMPK-207ENST00000596824 C8orf37Q96NL8 207 aa16.88■□□□□ 0.29
SYMPK-207ENST00000596824 SPATA31A3Q5VYP0 1347 aa16.88■□□□□ 0.29
SYMPK-207ENST00000596824 PRR36Q9H6K5 1346 aa16.88■□□□□ 0.29
SYMPK-207ENST00000596824 NWD2Q9ULI1 1742 aa16.87■□□□□ 0.29
SYMPK-207ENST00000596824 ADAMTS2O95450 1211 aa16.87■□□□□ 0.29
SYMPK-207ENST00000596824 NBPF1Q3BBV0 1214 aa16.87■□□□□ 0.29
SYMPK-207ENST00000596824 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
SYMPK-207ENST00000596824 WASLO00401 505 aaPredicted RBP16.86■□□□□ 0.29
SYMPK-207ENST00000596824 KRT28Q7Z3Y7 464 aa16.86■□□□□ 0.29
SYMPK-207ENST00000596824 SBNO1A3KN83 1393 aa16.86■□□□□ 0.29
SYMPK-207ENST00000596824 TRIM26Q12899 539 aaPredicted RBP16.85■□□□□ 0.29
SYMPK-207ENST00000596824 PSME1Q06323 249 aa16.83■□□□□ 0.28
SYMPK-207ENST00000596824 NEUROD1Q13562 356 aa16.83■□□□□ 0.28
SYMPK-207ENST00000596824 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
SYMPK-207ENST00000596824 NGLY1Q96IV0 654 aa16.83■□□□□ 0.28
SYMPK-207ENST00000596824 PHRF1Q9P1Y6 1649 aaKnown RBP16.83■□□□□ 0.28
SYMPK-207ENST00000596824 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
SYMPK-207ENST00000596824 ARHGEF10O15013 1369 aa16.81■□□□□ 0.28
SYMPK-207ENST00000596824 RXRBP28702 533 aa16.81■□□□□ 0.28
SYMPK-207ENST00000596824 BCL9LQ86UU0 1499 aa16.8■□□□□ 0.28
SYMPK-207ENST00000596824 RGS12O14924 1447 aa16.8■□□□□ 0.28
SYMPK-207ENST00000596824 ATRNO75882 1429 aa16.8■□□□□ 0.28
SYMPK-207ENST00000596824 FNBP4Q8N3X1 1017 aaPredicted RBP16.8■□□□□ 0.28
SYMPK-207ENST00000596824 BRWD3Q6RI45 1802 aa16.8■□□□□ 0.28
SYMPK-207ENST00000596824 AKAP12Q02952 1782 aa16.79■□□□□ 0.28
SYMPK-207ENST00000596824 GPRASP1Q5JY77 1395 aa16.79■□□□□ 0.28
SYMPK-207ENST00000596824 CENPJQ9HC77 1338 aaPredicted RBP16.79■□□□□ 0.28
SYMPK-207ENST00000596824 QTRT2Q9H974 415 aaKnown RBP16.79■□□□□ 0.28
SYMPK-207ENST00000596824 SLIT2O94813 1529 aa16.79■□□□□ 0.28
SYMPK-207ENST00000596824 COL14A1Q05707 1796 aaKnown RBP16.79■□□□□ 0.28
SYMPK-207ENST00000596824 NUDT16Q96DE0 195 aaKnown RBP16.78■□□□□ 0.28
SYMPK-207ENST00000596824 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
SYMPK-207ENST00000596824 USP21Q9UK80 565 aa16.78■□□□□ 0.28
SYMPK-207ENST00000596824 GLI3P10071 1580 aa16.77■□□□□ 0.28
SYMPK-207ENST00000596824 RBM6P78332 1123 aaKnown RBP16.77■□□□□ 0.28
SYMPK-207ENST00000596824 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.27
SYMPK-207ENST00000596824 POLR3AO14802 1390 aaPredicted RBP16.76■□□□□ 0.27
SYMPK-207ENST00000596824 RALGAPBQ86X10 1494 aa16.75■□□□□ 0.27
SYMPK-207ENST00000596824 NGDNQ8NEJ9 315 aaKnown RBP16.75■□□□□ 0.27
SYMPK-207ENST00000596824 CABLES1Q8TDN4 633 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms