RNA–Protein interactions for RNA: ENST00000596647.1

PDE4C-209, Transcript of phosphodiesterase 4C, humanhuman

TSL 3

Gene PDE4C, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-209ENST00000596647 SPATA31E1Q6ZUB1 1445 aa22.91■■□□□ 1.26
PDE4C-209ENST00000596647 FOXD1Q16676 465 aa22.91■■□□□ 1.26
PDE4C-209ENST00000596647 ADGRF5Q8IZF2 1346 aa22.9■■□□□ 1.26
PDE4C-209ENST00000596647 CCDC144AA2RUR9 1427 aa22.9■■□□□ 1.26
PDE4C-209ENST00000596647 FNBP4Q8N3X1 1017 aaPredicted RBP22.89■■□□□ 1.25
PDE4C-209ENST00000596647 MYOM2P54296 1465 aa22.89■■□□□ 1.25
PDE4C-209ENST00000596647 PXDNQ92626 1479 aa22.89■■□□□ 1.25
PDE4C-209ENST00000596647 SRCAPQ6ZRS2 3230 aa22.89■■□□□ 1.25
PDE4C-209ENST00000596647 NPHP3Q7Z494 1330 aa22.88■■□□□ 1.25
PDE4C-209ENST00000596647 USP21Q9UK80 565 aa22.88■■□□□ 1.25
PDE4C-209ENST00000596647 ANKRD30BQ9BXX2 1392 aa22.88■■□□□ 1.25
PDE4C-209ENST00000596647 LRPPRCP42704 1394 aaKnown RBP22.87■■□□□ 1.25
PDE4C-209ENST00000596647 IFT172Q9UG01 1749 aa22.86■■□□□ 1.25
PDE4C-209ENST00000596647 ESCO1Q5FWF5 840 aa22.86■■□□□ 1.25
PDE4C-209ENST00000596647 TRPC5Q9UL62 973 aaPredicted RBP22.86■■□□□ 1.25
PDE4C-209ENST00000596647 ATRNO75882 1429 aa22.85■■□□□ 1.25
PDE4C-209ENST00000596647 ABCC11Q96J66 1382 aa22.85■■□□□ 1.25
PDE4C-209ENST00000596647 EP400Q96L91 3159 aa22.85■■□□□ 1.25
PDE4C-209ENST00000596647 PIK3C2GO75747 1445 aa22.83■■□□□ 1.25
PDE4C-209ENST00000596647 RGL3Q3MIN7 710 aa22.83■■□□□ 1.25
PDE4C-209ENST00000596647 KNDC1Q76NI1 1749 aa22.82■■□□□ 1.24
PDE4C-209ENST00000596647 ATAD2Q6PL18 1390 aa22.82■■□□□ 1.24
PDE4C-209ENST00000596647 WAPLQ7Z5K2 1190 aa22.82■■□□□ 1.24
PDE4C-209ENST00000596647 MPHOSPH9Q99550 1183 aa22.82■■□□□ 1.24
PDE4C-209ENST00000596647 STK26Q9P289 416 aa22.82■■□□□ 1.24
PDE4C-209ENST00000596647 BCL9LQ86UU0 1499 aa22.81■■□□□ 1.24
PDE4C-209ENST00000596647 FOXO3O43524 673 aa22.81■■□□□ 1.24
PDE4C-209ENST00000596647 PLEKHH1Q9ULM0 1364 aa22.8■■□□□ 1.24
PDE4C-209ENST00000596647 XPCQ01831 940 aaPredicted RBP22.79■■□□□ 1.24
PDE4C-209ENST00000596647 TMEM132EQ6IEE7 984 aa22.78■■□□□ 1.24
PDE4C-209ENST00000596647 YTHDC2Q9H6S0 1430 aaKnown RBP22.78■■□□□ 1.24
PDE4C-209ENST00000596647 MARF1Q9Y4F3 1742 aaKnown RBP22.78■■□□□ 1.24
PDE4C-209ENST00000596647 FMN2Q9NZ56 1722 aa22.77■■□□□ 1.24
PDE4C-209ENST00000596647 NUTM2FA1L443 756 aa22.75■■□□□ 1.23
PDE4C-209ENST00000596647 SIRT1Q96EB6 747 aa22.75■■□□□ 1.23
PDE4C-209ENST00000596647 KIF1AQ12756 1690 aa22.74■■□□□ 1.23
PDE4C-209ENST00000596647 NRXN1Q9ULB1 1477 aa22.73■■□□□ 1.23
PDE4C-209ENST00000596647 SPATA31A3Q5VYP0 1347 aa22.73■■□□□ 1.23
PDE4C-209ENST00000596647 C14orf93Q9H972 538 aaKnown RBP22.72■■□□□ 1.23
PDE4C-209ENST00000596647 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.71■■□□□ 1.23
PDE4C-209ENST00000596647 GJD4Q96KN9 370 aaPredicted RBP22.7■■□□□ 1.22
PDE4C-209ENST00000596647 ACIN1Q9UKV3 1341 aaKnown RBP22.7■■□□□ 1.22
PDE4C-209ENST00000596647 SLIT2O94813 1529 aa22.7■■□□□ 1.22
PDE4C-209ENST00000596647 KRT28Q7Z3Y7 464 aa22.67■■□□□ 1.22
PDE4C-209ENST00000596647 UNC5CLQ8IV45 518 aa22.67■■□□□ 1.22
PDE4C-209ENST00000596647 USP32Q8NFA0 1604 aa22.67■■□□□ 1.22
PDE4C-209ENST00000596647 CCDC125Q86Z20 511 aa22.66■■□□□ 1.22
PDE4C-209ENST00000596647 RALGAPBQ86X10 1494 aa22.66■■□□□ 1.22
PDE4C-209ENST00000596647 TNS3Q68CZ2 1445 aa22.65■■□□□ 1.22
PDE4C-209ENST00000596647 DHX57Q6P158 1386 aaKnown RBP22.65■■□□□ 1.22
PDE4C-209ENST00000596647 GLI3P10071 1580 aa22.65■■□□□ 1.22
PDE4C-209ENST00000596647 CFAP70Q5T0N1 1121 aa22.65■■□□□ 1.22
PDE4C-209ENST00000596647 PHF8Q9UPP1 1060 aa22.65■■□□□ 1.22
PDE4C-209ENST00000596647 RGPD8O14715 1765 aaPredicted RBP22.63■■□□□ 1.21
PDE4C-209ENST00000596647 SBNO1A3KN83 1393 aa22.63■■□□□ 1.21
PDE4C-209ENST00000596647 DLC1Q96QB1 1528 aa22.62■■□□□ 1.21
PDE4C-209ENST00000596647 PSME1Q06323 249 aa22.61■■□□□ 1.21
PDE4C-209ENST00000596647 PRAM1Q96QH2 718 aa22.61■■□□□ 1.21
PDE4C-209ENST00000596647 ANKARQ7Z5J8 1434 aa22.59■■□□□ 1.21
PDE4C-209ENST00000596647 ZRANB1Q9UGI0 708 aa22.59■■□□□ 1.21
PDE4C-209ENST00000596647 ADGRB2O60241 1585 aa22.59■■□□□ 1.21
PDE4C-209ENST00000596647 ARHGEF10O15013 1369 aa22.58■■□□□ 1.21
PDE4C-209ENST00000596647 ADGRB1O14514 1584 aa22.58■■□□□ 1.2
PDE4C-209ENST00000596647 ABCA3Q99758 1704 aa22.57■■□□□ 1.2
PDE4C-209ENST00000596647 SAFB2Q14151 953 aaKnown RBP eCLIP22.57■■□□□ 1.2
PDE4C-209ENST00000596647 CABLES1Q8TDN4 633 aa22.57■■□□□ 1.2
PDE4C-209ENST00000596647 BLMP54132 1417 aaPredicted RBP22.57■■□□□ 1.2
PDE4C-209ENST00000596647 VPS72Q15906 364 aa22.56■■□□□ 1.2
PDE4C-209ENST00000596647 NWD2Q9ULI1 1742 aa22.56■■□□□ 1.2
PDE4C-209ENST00000596647 PLCH1Q4KWH8 1693 aa22.55■■□□□ 1.2
PDE4C-209ENST00000596647 HAP1P54257 671 aaPredicted RBP22.55■■□□□ 1.2
PDE4C-209ENST00000596647 RAB3GAP2Q9H2M9 1393 aa22.54■■□□□ 1.2
PDE4C-209ENST00000596647 POGKQ9P215 609 aa22.54■■□□□ 1.2
PDE4C-209ENST00000596647 BRWD3Q6RI45 1802 aa22.53■■□□□ 1.2
PDE4C-209ENST00000596647 ONECUT3O60422 494 aaPredicted RBP22.53■■□□□ 1.2
PDE4C-209ENST00000596647 SEPT12Q8IYM1 358 aa22.52■■□□□ 1.2
PDE4C-209ENST00000596647 TRPM3Q9HCF6 1732 aaPredicted RBP22.51■■□□□ 1.19
PDE4C-209ENST00000596647 FAM83GA6ND36 823 aa22.5■■□□□ 1.19
PDE4C-209ENST00000596647 LMOD2Q6P5Q4 547 aa22.5■■□□□ 1.19
PDE4C-209ENST00000596647 PMFBP1Q8TBY8 1022 aa22.5■■□□□ 1.19
PDE4C-209ENST00000596647 EIF3AQ14152 1382 aaKnown RBP22.49■■□□□ 1.19
PDE4C-209ENST00000596647 PLEKHG5O94827 1062 aa22.48■■□□□ 1.19
PDE4C-209ENST00000596647 TRAK1Q9UPV9 953 aa22.48■■□□□ 1.19
PDE4C-209ENST00000596647 TULP4Q9NRJ4 1543 aa22.47■■□□□ 1.19
PDE4C-209ENST00000596647 ALS2Q96Q42 1657 aa22.47■■□□□ 1.19
PDE4C-209ENST00000596647 HIRIP3Q9BW71 556 aaPredicted RBP22.47■■□□□ 1.19
PDE4C-209ENST00000596647 PRR36Q9H6K5 1346 aa22.47■■□□□ 1.19
PDE4C-209ENST00000596647 NRAPQ86VF7 1730 aa22.46■■□□□ 1.19
PDE4C-209ENST00000596647 KRT27Q7Z3Y8 459 aa22.45■■□□□ 1.18
PDE4C-209ENST00000596647 CCDC9Q9Y3X0 531 aaKnown RBP22.45■■□□□ 1.18
PDE4C-209ENST00000596647 MINK1Q8N4C8 1332 aaPredicted RBP22.45■■□□□ 1.18
PDE4C-209ENST00000596647 GPRASP1Q5JY77 1395 aa22.45■■□□□ 1.18
PDE4C-209ENST00000596647 DEFB132Q7Z7B7 95 aa22.44■■□□□ 1.18
PDE4C-209ENST00000596647 STAC3Q96MF2 364 aa22.44■■□□□ 1.18
PDE4C-209ENST00000596647 WASLO00401 505 aaPredicted RBP22.43■■□□□ 1.18
PDE4C-209ENST00000596647 DCAF11Q8TEB1 546 aa22.43■■□□□ 1.18
PDE4C-209ENST00000596647 SF3B2Q13435 895 aaKnown RBP22.42■■□□□ 1.18
PDE4C-209ENST00000596647 COL14A1Q05707 1796 aaKnown RBP22.42■■□□□ 1.18
PDE4C-209ENST00000596647 BTG4Q9NY30 223 aa22.41■■□□□ 1.18
PDE4C-209ENST00000596647 KDM2AQ9Y2K7 1162 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms