RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PLEKHH1Q9ULM0 1364 aa19.03■□□□□ 0.64
USE1-207ENST00000596136 NHSL1Q5SYE7 1610 aa19.03■□□□□ 0.64
USE1-207ENST00000596136 DLC1Q96QB1 1528 aa19.01■□□□□ 0.63
USE1-207ENST00000596136 TRIM26Q12899 539 aaPredicted RBP18.99■□□□□ 0.63
USE1-207ENST00000596136 ORAI2Q96SN7 254 aa18.98■□□□□ 0.63
USE1-207ENST00000596136 SHPRHQ149N8 1683 aa18.98■□□□□ 0.63
USE1-207ENST00000596136 SPATA31A6Q5VVP1 1343 aa18.98■□□□□ 0.63
USE1-207ENST00000596136 LRRC59Q96AG4 307 aaKnown RBP18.96■□□□□ 0.63
USE1-207ENST00000596136 PHF23Q9BUL5 403 aaPredicted RBP18.96■□□□□ 0.63
USE1-207ENST00000596136 RGS17Q9UGC6 210 aaPredicted RBP18.96■□□□□ 0.63
USE1-207ENST00000596136 DDX17Q92841 729 aaKnown RBP18.95■□□□□ 0.62
USE1-207ENST00000596136 PRAM1Q96QH2 718 aa18.95■□□□□ 0.62
USE1-207ENST00000596136 SOS2Q07890 1332 aaPredicted RBP18.95■□□□□ 0.62
USE1-207ENST00000596136 FMN2Q9NZ56 1722 aa18.94■□□□□ 0.62
USE1-207ENST00000596136 KIAA1210Q9ULL0 1709 aa18.94■□□□□ 0.62
USE1-207ENST00000596136 TRAK1Q9UPV9 953 aa18.93■□□□□ 0.62
USE1-207ENST00000596136 ESCO1Q5FWF5 840 aa18.91■□□□□ 0.62
USE1-207ENST00000596136 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
USE1-207ENST00000596136 POGKQ9P215 609 aa18.91■□□□□ 0.62
USE1-207ENST00000596136 LRP6O75581 1613 aa18.9■□□□□ 0.62
USE1-207ENST00000596136 L3MBTL2Q969R5 705 aa18.9■□□□□ 0.62
USE1-207ENST00000596136 PNPLA6Q8IY17 1366 aa18.9■□□□□ 0.62
USE1-207ENST00000596136 ADGRB2O60241 1585 aa18.89■□□□□ 0.62
USE1-207ENST00000596136 SOCS7O14512 581 aa18.89■□□□□ 0.61
USE1-207ENST00000596136 NPHP3Q7Z494 1330 aa18.89■□□□□ 0.61
USE1-207ENST00000596136 SAFB2Q14151 953 aaKnown RBP eCLIP18.88■□□□□ 0.61
USE1-207ENST00000596136 NUTM2FA1L443 756 aa18.87■□□□□ 0.61
USE1-207ENST00000596136 PXDNQ92626 1479 aa18.87■□□□□ 0.61
USE1-207ENST00000596136 ARHGEF28Q8N1W1 1705 aaKnown RBP18.86■□□□□ 0.61
USE1-207ENST00000596136 FOXO3O43524 673 aa18.86■□□□□ 0.61
USE1-207ENST00000596136 NBPF1Q3BBV0 1214 aa18.86■□□□□ 0.61
USE1-207ENST00000596136 RGPD8O14715 1765 aaPredicted RBP18.86■□□□□ 0.61
USE1-207ENST00000596136 ANKARQ7Z5J8 1434 aa18.85■□□□□ 0.61
USE1-207ENST00000596136 KIF1AQ12756 1690 aa18.85■□□□□ 0.61
USE1-207ENST00000596136 POTEAQ6S8J7 498 aa18.84■□□□□ 0.61
USE1-207ENST00000596136 NEUROD1Q13562 356 aa18.83■□□□□ 0.6
USE1-207ENST00000596136 PHF8Q9UPP1 1060 aa18.83■□□□□ 0.6
USE1-207ENST00000596136 USP32Q8NFA0 1604 aa18.82■□□□□ 0.6
USE1-207ENST00000596136 MINK1Q8N4C8 1332 aaPredicted RBP18.82■□□□□ 0.6
USE1-207ENST00000596136 WASLO00401 505 aaPredicted RBP18.82■□□□□ 0.6
USE1-207ENST00000596136 COL22A1Q8NFW1 1626 aaPredicted RBP18.82■□□□□ 0.6
USE1-207ENST00000596136 HIRIP3Q9BW71 556 aaPredicted RBP18.81■□□□□ 0.6
USE1-207ENST00000596136 EIF3AQ14152 1382 aaKnown RBP18.81■□□□□ 0.6
USE1-207ENST00000596136 NUTM2BA6NNL0 878 aaPredicted RBP18.8■□□□□ 0.6
USE1-207ENST00000596136 NUTM2EB1AL46 878 aaPredicted RBP18.8■□□□□ 0.6
USE1-207ENST00000596136 MEX3CQ5U5Q3 659 aaKnown RBP18.8■□□□□ 0.6
USE1-207ENST00000596136 NUTM2AQ8IVF1 878 aaPredicted RBP18.8■□□□□ 0.6
USE1-207ENST00000596136 TULP4Q9NRJ4 1543 aa18.79■□□□□ 0.6
USE1-207ENST00000596136 PRR36Q9H6K5 1346 aa18.78■□□□□ 0.6
USE1-207ENST00000596136 XPCQ01831 940 aaPredicted RBP18.78■□□□□ 0.6
USE1-207ENST00000596136 ZNF772Q68DY9 489 aaPredicted RBP18.78■□□□□ 0.6
USE1-207ENST00000596136 KRT28Q7Z3Y7 464 aa18.78■□□□□ 0.6
USE1-207ENST00000596136 SPATA31A3Q5VYP0 1347 aa18.77■□□□□ 0.6
USE1-207ENST00000596136 TRPM1Q7Z4N2 1603 aa18.77■□□□□ 0.6
USE1-207ENST00000596136 PSME1Q06323 249 aa18.75■□□□□ 0.59
USE1-207ENST00000596136 SBNO1A3KN83 1393 aa18.75■□□□□ 0.59
USE1-207ENST00000596136 ATP7BP35670 1465 aa18.73■□□□□ 0.59
USE1-207ENST00000596136 NBPF8Q3BBV2 869 aa18.73■□□□□ 0.59
USE1-207ENST00000596136 PMFBP1Q8TBY8 1022 aa18.73■□□□□ 0.59
USE1-207ENST00000596136 CDK19Q9BWU1 502 aa18.73■□□□□ 0.59
USE1-207ENST00000596136 AFF2P51816 1311 aa18.73■□□□□ 0.59
USE1-207ENST00000596136 CENPJQ9HC77 1338 aaPredicted RBP18.73■□□□□ 0.59
USE1-207ENST00000596136 GPRASP1Q5JY77 1395 aa18.72■□□□□ 0.59
USE1-207ENST00000596136 NUDT16Q96DE0 195 aaKnown RBP18.72■□□□□ 0.59
USE1-207ENST00000596136 C8orf37Q96NL8 207 aa18.72■□□□□ 0.59
USE1-207ENST00000596136 TNS3Q68CZ2 1445 aa18.72■□□□□ 0.59
USE1-207ENST00000596136 ADAMTS2O95450 1211 aa18.71■□□□□ 0.59
USE1-207ENST00000596136 ITSN1Q15811 1721 aa18.7■□□□□ 0.58
USE1-207ENST00000596136 FNBP4Q8N3X1 1017 aaPredicted RBP18.7■□□□□ 0.58
USE1-207ENST00000596136 ROCK2O75116 1388 aaKnown RBP18.69■□□□□ 0.58
USE1-207ENST00000596136 TONSLQ96HA7 1378 aa18.69■□□□□ 0.58
USE1-207ENST00000596136 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
USE1-207ENST00000596136 NGLY1Q96IV0 654 aa18.69■□□□□ 0.58
USE1-207ENST00000596136 ARHGEF10O15013 1369 aa18.68■□□□□ 0.58
USE1-207ENST00000596136 CCDC61Q9Y6R9 512 aa18.68■□□□□ 0.58
USE1-207ENST00000596136 MARF1Q9Y4F3 1742 aaKnown RBP18.68■□□□□ 0.58
USE1-207ENST00000596136 TOPAZ1Q8N9V7 1692 aa18.67■□□□□ 0.58
USE1-207ENST00000596136 QRICH2Q9H0J4 1663 aa18.67■□□□□ 0.58
USE1-207ENST00000596136 PLEKHG3A1L390 1219 aa18.67■□□□□ 0.58
USE1-207ENST00000596136 POLR3AO14802 1390 aaPredicted RBP18.67■□□□□ 0.58
USE1-207ENST00000596136 NGDNQ8NEJ9 315 aaKnown RBP18.66■□□□□ 0.58
USE1-207ENST00000596136 RXRBP28702 533 aa18.65■□□□□ 0.58
USE1-207ENST00000596136 QTRT2Q9H974 415 aaKnown RBP18.65■□□□□ 0.58
USE1-207ENST00000596136 ALS2Q96Q42 1657 aa18.65■□□□□ 0.58
USE1-207ENST00000596136 RALGAPBQ86X10 1494 aa18.65■□□□□ 0.58
USE1-207ENST00000596136 CDK12Q9NYV4 1490 aaPredicted RBP18.65■□□□□ 0.58
USE1-207ENST00000596136 USP21Q9UK80 565 aa18.63■□□□□ 0.57
USE1-207ENST00000596136 BCL9LQ86UU0 1499 aa18.63■□□□□ 0.57
USE1-207ENST00000596136 RBM6P78332 1123 aaKnown RBP18.62■□□□□ 0.57
USE1-207ENST00000596136 ACEP12821 1306 aa18.62■□□□□ 0.57
USE1-207ENST00000596136 SBNO2Q9Y2G9 1366 aa18.61■□□□□ 0.57
USE1-207ENST00000596136 CLSPNQ9HAW4 1339 aa18.61■□□□□ 0.57
USE1-207ENST00000596136 SRPK2P78362 688 aaKnown RBP18.61■□□□□ 0.57
USE1-207ENST00000596136 CABLES1Q8TDN4 633 aa18.61■□□□□ 0.57
USE1-207ENST00000596136 CABP2Q9NPB3 220 aa18.61■□□□□ 0.57
USE1-207ENST00000596136 ABCA3Q99758 1704 aa18.6■□□□□ 0.57
USE1-207ENST00000596136 SLIT2O94813 1529 aa18.6■□□□□ 0.57
USE1-207ENST00000596136 EVC2Q86UK5 1308 aa18.6■□□□□ 0.57
USE1-207ENST00000596136 LMOD2Q6P5Q4 547 aa18.6■□□□□ 0.57
USE1-207ENST00000596136 CARD11Q9BXL7 1154 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms