RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 WAPLQ7Z5K2 1190 aa22.98■■□□□ 1.27
ZNF550-207ENST00000595560 JCADQ9P266 1359 aa22.98■■□□□ 1.27
ZNF550-207ENST00000595560 PLEKHH1Q9ULM0 1364 aa22.98■■□□□ 1.27
ZNF550-207ENST00000595560 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
ZNF550-207ENST00000595560 KIAA1210Q9ULL0 1709 aa22.96■■□□□ 1.27
ZNF550-207ENST00000595560 FMN2Q9NZ56 1722 aa22.95■■□□□ 1.26
ZNF550-207ENST00000595560 ADGRB2O60241 1585 aa22.9■■□□□ 1.26
ZNF550-207ENST00000595560 ILDR2Q71H61 639 aa22.9■■□□□ 1.26
ZNF550-207ENST00000595560 ARHGEF28Q8N1W1 1705 aaKnown RBP22.89■■□□□ 1.26
ZNF550-207ENST00000595560 PRAM1Q96QH2 718 aa22.89■■□□□ 1.25
ZNF550-207ENST00000595560 ORAI2Q96SN7 254 aa22.89■■□□□ 1.25
ZNF550-207ENST00000595560 PHF23Q9BUL5 403 aaPredicted RBP22.89■■□□□ 1.25
ZNF550-207ENST00000595560 SPATA31A6Q5VVP1 1343 aa22.87■■□□□ 1.25
ZNF550-207ENST00000595560 DDX17Q92841 729 aaKnown RBP22.86■■□□□ 1.25
ZNF550-207ENST00000595560 KIF1AQ12756 1690 aa22.85■■□□□ 1.25
ZNF550-207ENST00000595560 TRAK1Q9UPV9 953 aa22.85■■□□□ 1.25
ZNF550-207ENST00000595560 RGPD8O14715 1765 aaPredicted RBP22.84■■□□□ 1.25
ZNF550-207ENST00000595560 LRP6O75581 1613 aa22.84■■□□□ 1.25
ZNF550-207ENST00000595560 LRRC59Q96AG4 307 aaKnown RBP22.84■■□□□ 1.25
ZNF550-207ENST00000595560 SIN3AQ96ST3 1273 aa22.84■■□□□ 1.25
ZNF550-207ENST00000595560 POGKQ9P215 609 aa22.84■■□□□ 1.25
ZNF550-207ENST00000595560 SOS2Q07890 1332 aaPredicted RBP22.83■■□□□ 1.25
ZNF550-207ENST00000595560 SAFB2Q14151 953 aaKnown RBP eCLIP22.83■■□□□ 1.25
ZNF550-207ENST00000595560 ESCO1Q5FWF5 840 aa22.83■■□□□ 1.25
ZNF550-207ENST00000595560 L3MBTL2Q969R5 705 aa22.81■■□□□ 1.24
ZNF550-207ENST00000595560 NPHP3Q7Z494 1330 aa22.81■■□□□ 1.24
ZNF550-207ENST00000595560 PNPLA6Q8IY17 1366 aa22.8■■□□□ 1.24
ZNF550-207ENST00000595560 USP32Q8NFA0 1604 aa22.8■■□□□ 1.24
ZNF550-207ENST00000595560 NUTM2FA1L443 756 aa22.8■■□□□ 1.24
ZNF550-207ENST00000595560 PXDNQ92626 1479 aa22.79■■□□□ 1.24
ZNF550-207ENST00000595560 ANKARQ7Z5J8 1434 aa22.79■■□□□ 1.24
ZNF550-207ENST00000595560 NEUROD1Q13562 356 aa22.78■■□□□ 1.24
ZNF550-207ENST00000595560 RGS17Q9UGC6 210 aaPredicted RBP22.78■■□□□ 1.24
ZNF550-207ENST00000595560 TRPM1Q7Z4N2 1603 aa22.78■■□□□ 1.24
ZNF550-207ENST00000595560 COL22A1Q8NFW1 1626 aaPredicted RBP22.77■■□□□ 1.24
ZNF550-207ENST00000595560 EIF3AQ14152 1382 aaKnown RBP22.76■■□□□ 1.23
ZNF550-207ENST00000595560 FOXO3O43524 673 aa22.75■■□□□ 1.23
ZNF550-207ENST00000595560 NBPF1Q3BBV0 1214 aa22.75■■□□□ 1.23
ZNF550-207ENST00000595560 TULP4Q9NRJ4 1543 aa22.75■■□□□ 1.23
ZNF550-207ENST00000595560 MINK1Q8N4C8 1332 aaPredicted RBP22.75■■□□□ 1.23
ZNF550-207ENST00000595560 HIRIP3Q9BW71 556 aaPredicted RBP22.73■■□□□ 1.23
ZNF550-207ENST00000595560 MEX3CQ5U5Q3 659 aaKnown RBP22.72■■□□□ 1.23
ZNF550-207ENST00000595560 PHF8Q9UPP1 1060 aa22.71■■□□□ 1.23
ZNF550-207ENST00000595560 ITSN1Q15811 1721 aa22.71■■□□□ 1.23
ZNF550-207ENST00000595560 NUTM2BA6NNL0 878 aaPredicted RBP22.7■■□□□ 1.22
ZNF550-207ENST00000595560 NUTM2EB1AL46 878 aaPredicted RBP22.7■■□□□ 1.22
ZNF550-207ENST00000595560 WASLO00401 505 aaPredicted RBP22.7■■□□□ 1.22
ZNF550-207ENST00000595560 SOCS7O14512 581 aa22.7■■□□□ 1.22
ZNF550-207ENST00000595560 NUTM2AQ8IVF1 878 aaPredicted RBP22.7■■□□□ 1.22
ZNF550-207ENST00000595560 XPCQ01831 940 aaPredicted RBP22.69■■□□□ 1.22
ZNF550-207ENST00000595560 QRICH2Q9H0J4 1663 aa22.68■■□□□ 1.22
ZNF550-207ENST00000595560 PRR36Q9H6K5 1346 aa22.67■■□□□ 1.22
ZNF550-207ENST00000595560 ATP7BP35670 1465 aa22.66■■□□□ 1.22
ZNF550-207ENST00000595560 TONSLQ96HA7 1378 aa22.66■■□□□ 1.22
ZNF550-207ENST00000595560 POTEAQ6S8J7 498 aa22.66■■□□□ 1.22
ZNF550-207ENST00000595560 TOPAZ1Q8N9V7 1692 aa22.65■■□□□ 1.22
ZNF550-207ENST00000595560 MARF1Q9Y4F3 1742 aaKnown RBP22.65■■□□□ 1.22
ZNF550-207ENST00000595560 ROCK2O75116 1388 aaKnown RBP22.64■■□□□ 1.22
ZNF550-207ENST00000595560 SPATA31A3Q5VYP0 1347 aa22.64■■□□□ 1.22
ZNF550-207ENST00000595560 KRT28Q7Z3Y7 464 aa22.64■■□□□ 1.21
ZNF550-207ENST00000595560 CENPJQ9HC77 1338 aaPredicted RBP22.63■■□□□ 1.21
ZNF550-207ENST00000595560 TRPM3Q9HCF6 1732 aaPredicted RBP22.63■■□□□ 1.21
ZNF550-207ENST00000595560 ZNF772Q68DY9 489 aaPredicted RBP22.63■■□□□ 1.21
ZNF550-207ENST00000595560 TNS3Q68CZ2 1445 aa22.63■■□□□ 1.21
ZNF550-207ENST00000595560 SBNO1A3KN83 1393 aa22.63■■□□□ 1.21
ZNF550-207ENST00000595560 GPRASP1Q5JY77 1395 aa22.62■■□□□ 1.21
ZNF550-207ENST00000595560 PSME1Q06323 249 aa22.61■■□□□ 1.21
ZNF550-207ENST00000595560 NBPF8Q3BBV2 869 aa22.61■■□□□ 1.21
ZNF550-207ENST00000595560 PMFBP1Q8TBY8 1022 aa22.61■■□□□ 1.21
ZNF550-207ENST00000595560 AFF2P51816 1311 aa22.59■■□□□ 1.21
ZNF550-207ENST00000595560 C8orf37Q96NL8 207 aa22.59■■□□□ 1.21
ZNF550-207ENST00000595560 CDK19Q9BWU1 502 aa22.59■■□□□ 1.21
ZNF550-207ENST00000595560 RALGAPBQ86X10 1494 aa22.59■■□□□ 1.21
ZNF550-207ENST00000595560 ALS2Q96Q42 1657 aa22.58■■□□□ 1.21
ZNF550-207ENST00000595560 ABCA3Q99758 1704 aa22.58■■□□□ 1.21
ZNF550-207ENST00000595560 ADAMTS2O95450 1211 aa22.58■■□□□ 1.21
ZNF550-207ENST00000595560 NUDT16Q96DE0 195 aaKnown RBP22.58■■□□□ 1.21
ZNF550-207ENST00000595560 ARHGEF10O15013 1369 aa22.57■■□□□ 1.2
ZNF550-207ENST00000595560 NGDNQ8NEJ9 315 aaKnown RBP22.53■■□□□ 1.2
ZNF550-207ENST00000595560 NGLY1Q96IV0 654 aa22.53■■□□□ 1.2
ZNF550-207ENST00000595560 PCGF6Q9BYE7 350 aa22.53■■□□□ 1.2
ZNF550-207ENST00000595560 CCDC61Q9Y6R9 512 aa22.53■■□□□ 1.2
ZNF550-207ENST00000595560 POLR3AO14802 1390 aaPredicted RBP22.52■■□□□ 1.2
ZNF550-207ENST00000595560 SRPK2P78362 688 aaKnown RBP22.5■■□□□ 1.19
ZNF550-207ENST00000595560 FNBP4Q8N3X1 1017 aaPredicted RBP22.5■■□□□ 1.19
ZNF550-207ENST00000595560 CRYBG1Q9Y4K1 1723 aa22.5■■□□□ 1.19
ZNF550-207ENST00000595560 CLSPNQ9HAW4 1339 aa22.5■■□□□ 1.19
ZNF550-207ENST00000595560 CDK12Q9NYV4 1490 aaPredicted RBP22.49■■□□□ 1.19
ZNF550-207ENST00000595560 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.49■■□□□ 1.19
ZNF550-207ENST00000595560 PLEKHG3A1L390 1219 aa22.49■■□□□ 1.19
ZNF550-207ENST00000595560 CARD11Q9BXL7 1154 aa22.49■■□□□ 1.19
ZNF550-207ENST00000595560 SBNO2Q9Y2G9 1366 aa22.49■■□□□ 1.19
ZNF550-207ENST00000595560 PPIP5K1Q6PFW1 1433 aa22.48■■□□□ 1.19
ZNF550-207ENST00000595560 LMOD2Q6P5Q4 547 aa22.48■■□□□ 1.19
ZNF550-207ENST00000595560 EVC2Q86UK5 1308 aa22.48■■□□□ 1.19
ZNF550-207ENST00000595560 RXRBP28702 533 aa22.47■■□□□ 1.19
ZNF550-207ENST00000595560 CABP2Q9NPB3 220 aa22.47■■□□□ 1.19
ZNF550-207ENST00000595560 ACEP12821 1306 aa22.47■■□□□ 1.19
ZNF550-207ENST00000595560 USP21Q9UK80 565 aa22.46■■□□□ 1.19
ZNF550-207ENST00000595560 CABLES1Q8TDN4 633 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms