RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 RGPD8O14715 1765 aaPredicted RBP16■□□□□ 0.15
SHKBP1-206ENST00000595523 STAC3Q96MF2 364 aa16■□□□□ 0.15
SHKBP1-206ENST00000595523 SIN3AQ96ST3 1273 aa16■□□□□ 0.15
SHKBP1-206ENST00000595523 C1orf167Q5SNV9 1468 aa15.99■□□□□ 0.15
SHKBP1-206ENST00000595523 BRINP3Q76B58 766 aa15.99■□□□□ 0.15
SHKBP1-206ENST00000595523 ADGRB2O60241 1585 aa15.96■□□□□ 0.15
SHKBP1-206ENST00000595523 SHPRHQ149N8 1683 aa15.96■□□□□ 0.15
SHKBP1-206ENST00000595523 SIRT1Q96EB6 747 aa15.96■□□□□ 0.15
SHKBP1-206ENST00000595523 TRPM1Q7Z4N2 1603 aa15.95■□□□□ 0.14
SHKBP1-206ENST00000595523 L3MBTL2Q969R5 705 aa15.95■□□□□ 0.14
SHKBP1-206ENST00000595523 DISP3Q9P2K9 1392 aa15.94■□□□□ 0.14
SHKBP1-206ENST00000595523 USP32Q8NFA0 1604 aa15.94■□□□□ 0.14
SHKBP1-206ENST00000595523 NEUROD1Q13562 356 aa15.93■□□□□ 0.14
SHKBP1-206ENST00000595523 PRAM1Q96QH2 718 aa15.93■□□□□ 0.14
SHKBP1-206ENST00000595523 ORAI2Q96SN7 254 aa15.92■□□□□ 0.14
SHKBP1-206ENST00000595523 TRAK1Q9UPV9 953 aa15.92■□□□□ 0.14
SHKBP1-206ENST00000595523 DDX17Q92841 729 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-206ENST00000595523 KIF1AQ12756 1690 aa15.9■□□□□ 0.14
SHKBP1-206ENST00000595523 SAFB2Q14151 953 aaKnown RBP eCLIP15.9■□□□□ 0.14
SHKBP1-206ENST00000595523 NBPF1Q3BBV0 1214 aa15.9■□□□□ 0.14
SHKBP1-206ENST00000595523 JCADQ9P266 1359 aa15.89■□□□□ 0.13
SHKBP1-206ENST00000595523 LRP6O75581 1613 aa15.87■□□□□ 0.13
SHKBP1-206ENST00000595523 NUTM2FA1L443 756 aa15.87■□□□□ 0.13
SHKBP1-206ENST00000595523 POGKQ9P215 609 aa15.87■□□□□ 0.13
SHKBP1-206ENST00000595523 QRICH2Q9H0J4 1663 aa15.86■□□□□ 0.13
SHKBP1-206ENST00000595523 PXDNQ92626 1479 aa15.86■□□□□ 0.13
SHKBP1-206ENST00000595523 PCGF6Q9BYE7 350 aa15.86■□□□□ 0.13
SHKBP1-206ENST00000595523 ESCO1Q5FWF5 840 aa15.85■□□□□ 0.13
SHKBP1-206ENST00000595523 TULP4Q9NRJ4 1543 aa15.84■□□□□ 0.13
SHKBP1-206ENST00000595523 HIRIP3Q9BW71 556 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-206ENST00000595523 ITSN1Q15811 1721 aa15.84■□□□□ 0.13
SHKBP1-206ENST00000595523 SOS2Q07890 1332 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-206ENST00000595523 MINK1Q8N4C8 1332 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-206ENST00000595523 COL22A1Q8NFW1 1626 aaPredicted RBP15.83■□□□□ 0.13
SHKBP1-206ENST00000595523 TOPAZ1Q8N9V7 1692 aa15.83■□□□□ 0.13
SHKBP1-206ENST00000595523 NBPF8Q3BBV2 869 aa15.83■□□□□ 0.12
SHKBP1-206ENST00000595523 ILDR2Q71H61 639 aa15.83■□□□□ 0.12
SHKBP1-206ENST00000595523 ANKARQ7Z5J8 1434 aa15.83■□□□□ 0.12
SHKBP1-206ENST00000595523 PNPLA6Q8IY17 1366 aa15.82■□□□□ 0.12
SHKBP1-206ENST00000595523 SPATA31A6Q5VVP1 1343 aa15.81■□□□□ 0.12
SHKBP1-206ENST00000595523 TONSLQ96HA7 1378 aa15.81■□□□□ 0.12
SHKBP1-206ENST00000595523 PRR36Q9H6K5 1346 aa15.81■□□□□ 0.12
SHKBP1-206ENST00000595523 ATP7BP35670 1465 aa15.8■□□□□ 0.12
SHKBP1-206ENST00000595523 FOXO3O43524 673 aa15.8■□□□□ 0.12
SHKBP1-206ENST00000595523 LRRC59Q96AG4 307 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-206ENST00000595523 RGS17Q9UGC6 210 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-206ENST00000595523 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-206ENST00000595523 GPRASP1Q5JY77 1395 aa15.79■□□□□ 0.12
SHKBP1-206ENST00000595523 NPHP3Q7Z494 1330 aa15.79■□□□□ 0.12
SHKBP1-206ENST00000595523 WASLO00401 505 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-206ENST00000595523 MARF1Q9Y4F3 1742 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-206ENST00000595523 RALGAPBQ86X10 1494 aa15.78■□□□□ 0.12
SHKBP1-206ENST00000595523 ROCK2O75116 1388 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-206ENST00000595523 XPCQ01831 940 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-206ENST00000595523 PHF23Q9BUL5 403 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-206ENST00000595523 PHF8Q9UPP1 1060 aa15.77■□□□□ 0.12
SHKBP1-206ENST00000595523 ABCA3Q99758 1704 aa15.77■□□□□ 0.11
SHKBP1-206ENST00000595523 EIF3AQ14152 1382 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-206ENST00000595523 ALS2Q96Q42 1657 aa15.76■□□□□ 0.11
SHKBP1-206ENST00000595523 CENPJQ9HC77 1338 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-206ENST00000595523 NUTM2BA6NNL0 878 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-206ENST00000595523 NUTM2EB1AL46 878 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-206ENST00000595523 NUTM2AQ8IVF1 878 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-206ENST00000595523 PMFBP1Q8TBY8 1022 aa15.73■□□□□ 0.11
SHKBP1-206ENST00000595523 CDK19Q9BWU1 502 aa15.73■□□□□ 0.11
SHKBP1-206ENST00000595523 SPATA31A3Q5VYP0 1347 aa15.72■□□□□ 0.11
SHKBP1-206ENST00000595523 CRYBG1Q9Y4K1 1723 aa15.72■□□□□ 0.11
SHKBP1-206ENST00000595523 TNS3Q68CZ2 1445 aa15.72■□□□□ 0.11
SHKBP1-206ENST00000595523 KRT28Q7Z3Y7 464 aa15.72■□□□□ 0.11
SHKBP1-206ENST00000595523 CLSPNQ9HAW4 1339 aa15.71■□□□□ 0.11
SHKBP1-206ENST00000595523 NUDT16Q96DE0 195 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-206ENST00000595523 POTEAQ6S8J7 498 aa15.7■□□□□ 0.1
SHKBP1-206ENST00000595523 SBNO1A3KN83 1393 aa15.7■□□□□ 0.1
SHKBP1-206ENST00000595523 MEX3CQ5U5Q3 659 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-206ENST00000595523 CARD11Q9BXL7 1154 aa15.68■□□□□ 0.1
SHKBP1-206ENST00000595523 POLR3AO14802 1390 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-206ENST00000595523 PSME1Q06323 249 aa15.67■□□□□ 0.1
SHKBP1-206ENST00000595523 CABP2Q9NPB3 220 aa15.67■□□□□ 0.1
SHKBP1-206ENST00000595523 AKAP12Q02952 1782 aa15.67■□□□□ 0.1
SHKBP1-206ENST00000595523 SBNO2Q9Y2G9 1366 aa15.66■□□□□ 0.1
SHKBP1-206ENST00000595523 CCDC61Q9Y6R9 512 aa15.66■□□□□ 0.1
SHKBP1-206ENST00000595523 PPIP5K1Q6PFW1 1433 aa15.66■□□□□ 0.1
SHKBP1-206ENST00000595523 ADAMTS2O95450 1211 aa15.65■□□□□ 0.1
SHKBP1-206ENST00000595523 SRPK2P78362 688 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-206ENST00000595523 AFF2P51816 1311 aa15.65■□□□□ 0.1
SHKBP1-206ENST00000595523 PHRF1Q9P1Y6 1649 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-206ENST00000595523 PLCH1Q4KWH8 1693 aa15.64■□□□□ 0.09
SHKBP1-206ENST00000595523 PLEKHG3A1L390 1219 aa15.64■□□□□ 0.09
SHKBP1-206ENST00000595523 NGDNQ8NEJ9 315 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-206ENST00000595523 C8orf37Q96NL8 207 aa15.64■□□□□ 0.09
SHKBP1-206ENST00000595523 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-206ENST00000595523 ACEP12821 1306 aa15.64■□□□□ 0.09
SHKBP1-206ENST00000595523 ARHGEF10O15013 1369 aa15.63■□□□□ 0.09
SHKBP1-206ENST00000595523 EVC2Q86UK5 1308 aa15.63■□□□□ 0.09
SHKBP1-206ENST00000595523 CCER1Q8TC90 406 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-206ENST00000595523 CABLES1Q8TDN4 633 aa15.62■□□□□ 0.09
SHKBP1-206ENST00000595523 TIMELESSQ9UNS1 1208 aa15.62■□□□□ 0.09
SHKBP1-206ENST00000595523 MON2Q7Z3U7 1717 aa15.62■□□□□ 0.09
SHKBP1-206ENST00000595523 NWD2Q9ULI1 1742 aa15.61■□□□□ 0.09
SHKBP1-206ENST00000595523 SOCS7O14512 581 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms