RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 CDC42BPGQ6DT37 1551 aa8.65□□□□□ -1.03
SSX4B-201ENST00000595235 C1orf167Q5SNV9 1468 aa8.64□□□□□ -1.03
SSX4B-201ENST00000595235 LRPPRCP42704 1394 aaKnown RBP8.63□□□□□ -1.03
SSX4B-201ENST00000595235 JCADQ9P266 1359 aa8.63□□□□□ -1.03
SSX4B-201ENST00000595235 PLEKHH1Q9ULM0 1364 aa8.63□□□□□ -1.03
SSX4B-201ENST00000595235 LRP6O75581 1613 aa8.63□□□□□ -1.03
SSX4B-201ENST00000595235 HRCP23327 699 aa8.63□□□□□ -1.03
SSX4B-201ENST00000595235 TMEM132EQ6IEE7 984 aa8.63□□□□□ -1.03
SSX4B-201ENST00000595235 FMN2Q9NZ56 1722 aa8.63□□□□□ -1.03
SSX4B-201ENST00000595235 YTHDC2Q9H6S0 1430 aaKnown RBP8.63□□□□□ -1.03
SSX4B-201ENST00000595235 ADGRB1O14514 1584 aa8.62□□□□□ -1.03
SSX4B-201ENST00000595235 DDX17Q92841 729 aaKnown RBP8.62□□□□□ -1.03
SSX4B-201ENST00000595235 STK26Q9P289 416 aa8.62□□□□□ -1.03
SSX4B-201ENST00000595235 RGS17Q9UGC6 210 aaPredicted RBP8.62□□□□□ -1.03
SSX4B-201ENST00000595235 ABCC11Q96J66 1382 aa8.61□□□□□ -1.03
SSX4B-201ENST00000595235 C1QBPQ07021 282 aaKnown RBP8.61□□□□□ -1.03
SSX4B-201ENST00000595235 CFAP70Q5T0N1 1121 aa8.61□□□□□ -1.03
SSX4B-201ENST00000595235 WAPLQ7Z5K2 1190 aa8.61□□□□□ -1.03
SSX4B-201ENST00000595235 C14orf93Q9H972 538 aaKnown RBP8.61□□□□□ -1.03
SSX4B-201ENST00000595235 DHX57Q6P158 1386 aaKnown RBP8.61□□□□□ -1.03
SSX4B-201ENST00000595235 SOCS7O14512 581 aa8.6□□□□□ -1.03
SSX4B-201ENST00000595235 RGPD8O14715 1765 aaPredicted RBP8.6□□□□□ -1.03
SSX4B-201ENST00000595235 DLC1Q96QB1 1528 aa8.59□□□□□ -1.03
SSX4B-201ENST00000595235 ORAI2Q96SN7 254 aa8.59□□□□□ -1.03
SSX4B-201ENST00000595235 ARHGEF28Q8N1W1 1705 aaKnown RBP8.59□□□□□ -1.03
SSX4B-201ENST00000595235 SPATA31A6Q5VVP1 1343 aa8.58□□□□□ -1.04
SSX4B-201ENST00000595235 ADGRB2O60241 1585 aa8.58□□□□□ -1.04
SSX4B-201ENST00000595235 DCAF11Q8TEB1 546 aa8.58□□□□□ -1.04
SSX4B-201ENST00000595235 KDM2AQ9Y2K7 1162 aa8.58□□□□□ -1.04
SSX4B-201ENST00000595235 KIF1AQ12756 1690 aa8.58□□□□□ -1.04
SSX4B-201ENST00000595235 PNPLA6Q8IY17 1366 aa8.58□□□□□ -1.04
SSX4B-201ENST00000595235 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
SSX4B-201ENST00000595235 COL22A1Q8NFW1 1626 aaPredicted RBP8.57□□□□□ -1.04
SSX4B-201ENST00000595235 KIAA1210Q9ULL0 1709 aa8.57□□□□□ -1.04
SSX4B-201ENST00000595235 PXDNQ92626 1479 aa8.57□□□□□ -1.04
SSX4B-201ENST00000595235 NUTM2FA1L443 756 aa8.56□□□□□ -1.04
SSX4B-201ENST00000595235 POTEAQ6S8J7 498 aa8.56□□□□□ -1.04
SSX4B-201ENST00000595235 SIRT1Q96EB6 747 aa8.56□□□□□ -1.04
SSX4B-201ENST00000595235 SOS2Q07890 1332 aaPredicted RBP8.55□□□□□ -1.04
SSX4B-201ENST00000595235 NUTM2BA6NNL0 878 aaPredicted RBP8.55□□□□□ -1.04
SSX4B-201ENST00000595235 NUTM2EB1AL46 878 aaPredicted RBP8.55□□□□□ -1.04
SSX4B-201ENST00000595235 SAFB2Q14151 953 aaKnown RBP eCLIP8.55□□□□□ -1.04
SSX4B-201ENST00000595235 ESCO1Q5FWF5 840 aa8.55□□□□□ -1.04
SSX4B-201ENST00000595235 NUTM2AQ8IVF1 878 aaPredicted RBP8.55□□□□□ -1.04
SSX4B-201ENST00000595235 LRRC59Q96AG4 307 aaKnown RBP8.55□□□□□ -1.04
SSX4B-201ENST00000595235 PRAM1Q96QH2 718 aa8.55□□□□□ -1.04
SSX4B-201ENST00000595235 MEX3CQ5U5Q3 659 aaKnown RBP8.54□□□□□ -1.04
SSX4B-201ENST00000595235 TRAK1Q9UPV9 953 aa8.54□□□□□ -1.04
SSX4B-201ENST00000595235 MARF1Q9Y4F3 1742 aaKnown RBP8.54□□□□□ -1.04
SSX4B-201ENST00000595235 XPCQ01831 940 aaPredicted RBP8.53□□□□□ -1.04
SSX4B-201ENST00000595235 NPHP3Q7Z494 1330 aa8.53□□□□□ -1.04
SSX4B-201ENST00000595235 ABCA3Q99758 1704 aa8.52□□□□□ -1.05
SSX4B-201ENST00000595235 TRPM1Q7Z4N2 1603 aa8.52□□□□□ -1.05
SSX4B-201ENST00000595235 FOXO3O43524 673 aa8.52□□□□□ -1.05
SSX4B-201ENST00000595235 STAC3Q96MF2 364 aa8.52□□□□□ -1.05
SSX4B-201ENST00000595235 TULP4Q9NRJ4 1543 aa8.52□□□□□ -1.05
SSX4B-201ENST00000595235 ANKARQ7Z5J8 1434 aa8.52□□□□□ -1.05
SSX4B-201ENST00000595235 MINK1Q8N4C8 1332 aaPredicted RBP8.52□□□□□ -1.05
SSX4B-201ENST00000595235 TRPM3Q9HCF6 1732 aaPredicted RBP8.51□□□□□ -1.05
SSX4B-201ENST00000595235 TOPAZ1Q8N9V7 1692 aa8.51□□□□□ -1.05
SSX4B-201ENST00000595235 SIN3AQ96ST3 1273 aa8.51□□□□□ -1.05
SSX4B-201ENST00000595235 HIRIP3Q9BW71 556 aaPredicted RBP8.51□□□□□ -1.05
SSX4B-201ENST00000595235 POGKQ9P215 609 aa8.51□□□□□ -1.05
SSX4B-201ENST00000595235 U3KPZ7 1027 aaPredicted RBP8.51□□□□□ -1.05
SSX4B-201ENST00000595235 ITSN1Q15811 1721 aa8.51□□□□□ -1.05
SSX4B-201ENST00000595235 AFF2P51816 1311 aa8.51□□□□□ -1.05
SSX4B-201ENST00000595235 QRICH2Q9H0J4 1663 aa8.5□□□□□ -1.05
SSX4B-201ENST00000595235 PRR36Q9H6K5 1346 aa8.5□□□□□ -1.05
SSX4B-201ENST00000595235 TNS3Q68CZ2 1445 aa8.49□□□□□ -1.05
SSX4B-201ENST00000595235 NBPF1Q3BBV0 1214 aa8.49□□□□□ -1.05
SSX4B-201ENST00000595235 ZNF772Q68DY9 489 aaPredicted RBP8.49□□□□□ -1.05
SSX4B-201ENST00000595235 L3MBTL2Q969R5 705 aa8.49□□□□□ -1.05
SSX4B-201ENST00000595235 C8orf37Q96NL8 207 aa8.49□□□□□ -1.05
SSX4B-201ENST00000595235 PHF8Q9UPP1 1060 aa8.49□□□□□ -1.05
SSX4B-201ENST00000595235 ATP7BP35670 1465 aa8.49□□□□□ -1.05
SSX4B-201ENST00000595235 ALS2Q96Q42 1657 aa8.49□□□□□ -1.05
SSX4B-201ENST00000595235 SPATA31A3Q5VYP0 1347 aa8.49□□□□□ -1.05
SSX4B-201ENST00000595235 ADAMTS2O95450 1211 aa8.48□□□□□ -1.05
SSX4B-201ENST00000595235 SLC4A2P04920 1241 aa8.48□□□□□ -1.05
SSX4B-201ENST00000595235 CRYBG1Q9Y4K1 1723 aa8.48□□□□□ -1.05
SSX4B-201ENST00000595235 PLCH1Q4KWH8 1693 aa8.47□□□□□ -1.05
SSX4B-201ENST00000595235 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.47□□□□□ -1.05
SSX4B-201ENST00000595235 WASLO00401 505 aaPredicted RBP8.47□□□□□ -1.05
SSX4B-201ENST00000595235 NEUROD1Q13562 356 aa8.47□□□□□ -1.05
SSX4B-201ENST00000595235 KRT28Q7Z3Y7 464 aa8.47□□□□□ -1.05
SSX4B-201ENST00000595235 PMFBP1Q8TBY8 1022 aa8.47□□□□□ -1.05
SSX4B-201ENST00000595235 SBNO1A3KN83 1393 aa8.47□□□□□ -1.05
SSX4B-201ENST00000595235 EIF3AQ14152 1382 aaKnown RBP8.47□□□□□ -1.05
SSX4B-201ENST00000595235 CDK12Q9NYV4 1490 aaPredicted RBP8.46□□□□□ -1.05
SSX4B-201ENST00000595235 TRIM26Q12899 539 aaPredicted RBP8.46□□□□□ -1.06
SSX4B-201ENST00000595235 RGS12O14924 1447 aa8.46□□□□□ -1.06
SSX4B-201ENST00000595235 NGLY1Q96IV0 654 aa8.45□□□□□ -1.06
SSX4B-201ENST00000595235 ATRNO75882 1429 aa8.45□□□□□ -1.06
SSX4B-201ENST00000595235 BCL9LQ86UU0 1499 aa8.45□□□□□ -1.06
SSX4B-201ENST00000595235 PHRF1Q9P1Y6 1649 aaKnown RBP8.44□□□□□ -1.06
SSX4B-201ENST00000595235 NWD2Q9ULI1 1742 aa8.44□□□□□ -1.06
SSX4B-201ENST00000595235 PLEKHG5O94827 1062 aa8.44□□□□□ -1.06
SSX4B-201ENST00000595235 RXRBP28702 533 aa8.44□□□□□ -1.06
SSX4B-201ENST00000595235 PSME1Q06323 249 aa8.44□□□□□ -1.06
SSX4B-201ENST00000595235 FNBP4Q8N3X1 1017 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms