RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 LAMC1P11047 1609 aa21.46■■□□□ 1.03
USE1-205ENST00000594724 TRIM26Q12899 539 aaPredicted RBP21.45■■□□□ 1.02
USE1-205ENST00000594724 KNDC1Q76NI1 1749 aa21.45■■□□□ 1.02
USE1-205ENST00000594724 NUTM2FA1L443 756 aa21.44■■□□□ 1.02
USE1-205ENST00000594724 SAFB2Q14151 953 aaKnown RBP eCLIP21.44■■□□□ 1.02
USE1-205ENST00000594724 PRAM1Q96QH2 718 aa21.43■■□□□ 1.02
USE1-205ENST00000594724 SIN3AQ96ST3 1273 aa21.43■■□□□ 1.02
USE1-205ENST00000594724 TRAK1Q9UPV9 953 aa21.43■■□□□ 1.02
USE1-205ENST00000594724 ESCO1Q5FWF5 840 aa21.41■■□□□ 1.02
USE1-205ENST00000594724 ADGRB1O14514 1584 aa21.4■■□□□ 1.02
USE1-205ENST00000594724 CDC42BPGQ6DT37 1551 aa21.4■■□□□ 1.02
USE1-205ENST00000594724 POGKQ9P215 609 aa21.4■■□□□ 1.02
USE1-205ENST00000594724 RGS17Q9UGC6 210 aaPredicted RBP21.4■■□□□ 1.02
USE1-205ENST00000594724 NHSL1Q5SYE7 1610 aa21.4■■□□□ 1.02
USE1-205ENST00000594724 NEUROD1Q13562 356 aa21.39■■□□□ 1.01
USE1-205ENST00000594724 LRRC59Q96AG4 307 aaKnown RBP21.39■■□□□ 1.01
USE1-205ENST00000594724 SPATA31A6Q5VVP1 1343 aa21.37■■□□□ 1.01
USE1-205ENST00000594724 NUTM2BA6NNL0 878 aaPredicted RBP21.36■■□□□ 1.01
USE1-205ENST00000594724 NUTM2EB1AL46 878 aaPredicted RBP21.36■■□□□ 1.01
USE1-205ENST00000594724 NUTM2AQ8IVF1 878 aaPredicted RBP21.36■■□□□ 1.01
USE1-205ENST00000594724 DLC1Q96QB1 1528 aa21.35■■□□□ 1.01
USE1-205ENST00000594724 L3MBTL2Q969R5 705 aa21.35■■□□□ 1.01
USE1-205ENST00000594724 LRP6O75581 1613 aa21.33■■□□□ 1.01
USE1-205ENST00000594724 SOS2Q07890 1332 aaPredicted RBP21.33■■□□□ 1.01
USE1-205ENST00000594724 FOXO3O43524 673 aa21.33■■□□□ 1.01
USE1-205ENST00000594724 NBPF1Q3BBV0 1214 aa21.33■■□□□ 1.01
USE1-205ENST00000594724 HIRIP3Q9BW71 556 aaPredicted RBP21.33■■□□□ 1.01
USE1-205ENST00000594724 SHPRHQ149N8 1683 aa21.33■■□□□ 1
USE1-205ENST00000594724 XPCQ01831 940 aaPredicted RBP21.32■■□□□ 1
USE1-205ENST00000594724 MEX3CQ5U5Q3 659 aaKnown RBP21.32■■□□□ 1
USE1-205ENST00000594724 MINK1Q8N4C8 1332 aaPredicted RBP21.31■■□□□ 1
USE1-205ENST00000594724 SOCS7O14512 581 aa21.31■■□□□ 1
USE1-205ENST00000594724 FMN2Q9NZ56 1722 aa21.31■■□□□ 1
USE1-205ENST00000594724 PNPLA6Q8IY17 1366 aa21.31■■□□□ 1
USE1-205ENST00000594724 NPHP3Q7Z494 1330 aa21.3■■□□□ 1
USE1-205ENST00000594724 POTEAQ6S8J7 498 aa21.3■■□□□ 1
USE1-205ENST00000594724 PHF8Q9UPP1 1060 aa21.26■□□□□ 0.99
USE1-205ENST00000594724 PXDNQ92626 1479 aa21.25■□□□□ 0.99
USE1-205ENST00000594724 KIAA1210Q9ULL0 1709 aa21.24■□□□□ 0.99
USE1-205ENST00000594724 RGPD8O14715 1765 aaPredicted RBP21.24■□□□□ 0.99
USE1-205ENST00000594724 WASLO00401 505 aaPredicted RBP21.24■□□□□ 0.99
USE1-205ENST00000594724 KRT28Q7Z3Y7 464 aa21.23■□□□□ 0.99
USE1-205ENST00000594724 PMFBP1Q8TBY8 1022 aa21.23■□□□□ 0.99
USE1-205ENST00000594724 ARHGEF28Q8N1W1 1705 aaKnown RBP21.23■□□□□ 0.99
USE1-205ENST00000594724 ADGRB2O60241 1585 aa21.23■□□□□ 0.99
USE1-205ENST00000594724 ADAMTS2O95450 1211 aa21.21■□□□□ 0.99
USE1-205ENST00000594724 PRR36Q9H6K5 1346 aa21.21■□□□□ 0.99
USE1-205ENST00000594724 USP32Q8NFA0 1604 aa21.2■□□□□ 0.98
USE1-205ENST00000594724 ANKARQ7Z5J8 1434 aa21.2■□□□□ 0.98
USE1-205ENST00000594724 KIF1AQ12756 1690 aa21.19■□□□□ 0.98
USE1-205ENST00000594724 C8orf37Q96NL8 207 aa21.19■□□□□ 0.98
USE1-205ENST00000594724 PSME1Q06323 249 aa21.18■□□□□ 0.98
USE1-205ENST00000594724 NBPF8Q3BBV2 869 aa21.18■□□□□ 0.98
USE1-205ENST00000594724 ZNF772Q68DY9 489 aaPredicted RBP21.18■□□□□ 0.98
USE1-205ENST00000594724 AFF2P51816 1311 aa21.18■□□□□ 0.98
USE1-205ENST00000594724 SPATA31A3Q5VYP0 1347 aa21.18■□□□□ 0.98
USE1-205ENST00000594724 CDK19Q9BWU1 502 aa21.17■□□□□ 0.98
USE1-205ENST00000594724 TULP4Q9NRJ4 1543 aa21.16■□□□□ 0.98
USE1-205ENST00000594724 EIF3AQ14152 1382 aaKnown RBP21.16■□□□□ 0.98
USE1-205ENST00000594724 NUDT16Q96DE0 195 aaKnown RBP21.15■□□□□ 0.98
USE1-205ENST00000594724 NGLY1Q96IV0 654 aa21.15■□□□□ 0.98
USE1-205ENST00000594724 CENPJQ9HC77 1338 aaPredicted RBP21.14■□□□□ 0.97
USE1-205ENST00000594724 COL22A1Q8NFW1 1626 aaPredicted RBP21.14■□□□□ 0.97
USE1-205ENST00000594724 TONSLQ96HA7 1378 aa21.13■□□□□ 0.97
USE1-205ENST00000594724 LMOD2Q6P5Q4 547 aa21.13■□□□□ 0.97
USE1-205ENST00000594724 TRPM1Q7Z4N2 1603 aa21.13■□□□□ 0.97
USE1-205ENST00000594724 ROCK2O75116 1388 aaKnown RBP21.12■□□□□ 0.97
USE1-205ENST00000594724 PLEKHG5O94827 1062 aa21.12■□□□□ 0.97
USE1-205ENST00000594724 NGDNQ8NEJ9 315 aaKnown RBP21.12■□□□□ 0.97
USE1-205ENST00000594724 PCGF6Q9BYE7 350 aa21.11■□□□□ 0.97
USE1-205ENST00000594724 SBNO1A3KN83 1393 aa21.1■□□□□ 0.97
USE1-205ENST00000594724 TNS3Q68CZ2 1445 aa21.1■□□□□ 0.97
USE1-205ENST00000594724 ATP7BP35670 1465 aa21.09■□□□□ 0.97
USE1-205ENST00000594724 CABLES1Q8TDN4 633 aa21.09■□□□□ 0.97
USE1-205ENST00000594724 QTRT2Q9H974 415 aaKnown RBP21.09■□□□□ 0.97
USE1-205ENST00000594724 GPRASP1Q5JY77 1395 aa21.09■□□□□ 0.97
USE1-205ENST00000594724 RXRBP28702 533 aa21.08■□□□□ 0.97
USE1-205ENST00000594724 SRPK2P78362 688 aaKnown RBP21.08■□□□□ 0.97
USE1-205ENST00000594724 CABP2Q9NPB3 220 aa21.07■□□□□ 0.96
USE1-205ENST00000594724 CCDC61Q9Y6R9 512 aa21.07■□□□□ 0.96
USE1-205ENST00000594724 USP21Q9UK80 565 aa21.06■□□□□ 0.96
USE1-205ENST00000594724 PAK3O75914 559 aaPredicted RBP21.05■□□□□ 0.96
USE1-205ENST00000594724 HAP1P54257 671 aaPredicted RBP21.05■□□□□ 0.96
USE1-205ENST00000594724 FNBP4Q8N3X1 1017 aaPredicted RBP21.05■□□□□ 0.96
USE1-205ENST00000594724 ARHGEF10O15013 1369 aa21.04■□□□□ 0.96
USE1-205ENST00000594724 QRICH2Q9H0J4 1663 aa21.04■□□□□ 0.96
USE1-205ENST00000594724 ACEP12821 1306 aa21.04■□□□□ 0.96
USE1-205ENST00000594724 PLEKHG3A1L390 1219 aa21.03■□□□□ 0.96
USE1-205ENST00000594724 CARD11Q9BXL7 1154 aa21.03■□□□□ 0.96
USE1-205ENST00000594724 ITSN1Q15811 1721 aa21.02■□□□□ 0.96
USE1-205ENST00000594724 TRPM3Q9HCF6 1732 aaPredicted RBP21.02■□□□□ 0.96
USE1-205ENST00000594724 RBM6P78332 1123 aaKnown RBP21■□□□□ 0.95
USE1-205ENST00000594724 EVC2Q86UK5 1308 aa21■□□□□ 0.95
USE1-205ENST00000594724 POLR3AO14802 1390 aaPredicted RBP20.99■□□□□ 0.95
USE1-205ENST00000594724 MARF1Q9Y4F3 1742 aaKnown RBP20.99■□□□□ 0.95
USE1-205ENST00000594724 PPIP5K1Q6PFW1 1433 aa20.99■□□□□ 0.95
USE1-205ENST00000594724 TRPC5Q9UL62 973 aaPredicted RBP20.99■□□□□ 0.95
USE1-205ENST00000594724 TOPAZ1Q8N9V7 1692 aa20.99■□□□□ 0.95
USE1-205ENST00000594724 CABP1Q9NZU7 370 aa20.98■□□□□ 0.95
USE1-205ENST00000594724 BCL9LQ86UU0 1499 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms