RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 ROBO2Q9HCK4 1378 aa13.1□□□□□ -0.31
SMG9-202ENST00000594081 ORAI2Q96SN7 254 aa13.1□□□□□ -0.31
SMG9-202ENST00000594081 BCL9LQ86UU0 1499 aa13.1□□□□□ -0.31
SMG9-202ENST00000594081 PXDNQ92626 1479 aa13.1□□□□□ -0.31
SMG9-202ENST00000594081 LRP5O75197 1615 aa13.1□□□□□ -0.31
SMG9-202ENST00000594081 GLI3P10071 1580 aa13.08□□□□□ -0.32
SMG9-202ENST00000594081 BRWD3Q6RI45 1802 aa13.07□□□□□ -0.32
SMG9-202ENST00000594081 CCDC125Q86Z20 511 aa13.07□□□□□ -0.32
SMG9-202ENST00000594081 HFM1A2PYH4 1435 aa13.06□□□□□ -0.32
SMG9-202ENST00000594081 BLMP54132 1417 aaPredicted RBP13.06□□□□□ -0.32
SMG9-202ENST00000594081 PPLO60437 1756 aa13.06□□□□□ -0.32
SMG9-202ENST00000594081 NPHP3Q7Z494 1330 aa13.05□□□□□ -0.32
SMG9-202ENST00000594081 USP32Q8NFA0 1604 aa13.05□□□□□ -0.32
SMG9-202ENST00000594081 RALGAPBQ86X10 1494 aa13.04□□□□□ -0.32
SMG9-202ENST00000594081 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
SMG9-202ENST00000594081 SLIT2O94813 1529 aa13.03□□□□□ -0.32
SMG9-202ENST00000594081 PLCH1Q4KWH8 1693 aa13.03□□□□□ -0.32
SMG9-202ENST00000594081 KIF1AQ12756 1690 aa13.02□□□□□ -0.32
SMG9-202ENST00000594081 ITGAEP38570 1179 aa13.01□□□□□ -0.33
SMG9-202ENST00000594081 XPCQ01831 940 aaPredicted RBP13.01□□□□□ -0.33
SMG9-202ENST00000594081 ESCO1Q5FWF5 840 aa13.01□□□□□ -0.33
SMG9-202ENST00000594081 ABCA3Q99758 1704 aa13.01□□□□□ -0.33
SMG9-202ENST00000594081 KNDC1Q76NI1 1749 aa13□□□□□ -0.33
SMG9-202ENST00000594081 FMN2Q9NZ56 1722 aa13□□□□□ -0.33
SMG9-202ENST00000594081 NAIPQ13075 1403 aa13□□□□□ -0.33
SMG9-202ENST00000594081 NWD2Q9ULI1 1742 aa12.99□□□□□ -0.33
SMG9-202ENST00000594081 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
SMG9-202ENST00000594081 LRPPRCP42704 1394 aaKnown RBP12.98□□□□□ -0.33
SMG9-202ENST00000594081 VGFO15240 615 aaPredicted RBP12.98□□□□□ -0.33
SMG9-202ENST00000594081 FOXO3O43524 673 aa12.98□□□□□ -0.33
SMG9-202ENST00000594081 UNC5CLQ8IV45 518 aa12.98□□□□□ -0.33
SMG9-202ENST00000594081 IFT172Q9UG01 1749 aa12.97□□□□□ -0.33
SMG9-202ENST00000594081 CCDC144AA2RUR9 1427 aa12.96□□□□□ -0.33
SMG9-202ENST00000594081 TECPR2O15040 1411 aa12.96□□□□□ -0.33
SMG9-202ENST00000594081 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.33
SMG9-202ENST00000594081 SPATA31A3Q5VYP0 1347 aa12.94□□□□□ -0.34
SMG9-202ENST00000594081 RPGRIP1LQ68CZ1 1315 aa12.94□□□□□ -0.34
SMG9-202ENST00000594081 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
SMG9-202ENST00000594081 NRAPQ86VF7 1730 aa12.94□□□□□ -0.34
SMG9-202ENST00000594081 NUTM2FA1L443 756 aa12.94□□□□□ -0.34
SMG9-202ENST00000594081 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
SMG9-202ENST00000594081 SEPT12Q8IYM1 358 aa12.93□□□□□ -0.34
SMG9-202ENST00000594081 RGPD8O14715 1765 aaPredicted RBP12.93□□□□□ -0.34
SMG9-202ENST00000594081 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
SMG9-202ENST00000594081 PLEKHH1Q9ULM0 1364 aa12.92□□□□□ -0.34
SMG9-202ENST00000594081 TNS1Q9HBL0 1735 aaKnown RBP12.91□□□□□ -0.34
SMG9-202ENST00000594081 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
SMG9-202ENST00000594081 VPS72Q15906 364 aa12.91□□□□□ -0.34
SMG9-202ENST00000594081 KRT27Q7Z3Y8 459 aa12.9□□□□□ -0.34
SMG9-202ENST00000594081 WAPLQ7Z5K2 1190 aa12.9□□□□□ -0.34
SMG9-202ENST00000594081 HRCP23327 699 aa12.89□□□□□ -0.35
SMG9-202ENST00000594081 HAP1P54257 671 aaPredicted RBP12.89□□□□□ -0.35
SMG9-202ENST00000594081 CCDC9Q9Y3X0 531 aaKnown RBP12.89□□□□□ -0.35
SMG9-202ENST00000594081 ADGRF5Q8IZF2 1346 aa12.88□□□□□ -0.35
SMG9-202ENST00000594081 BAG6P46379 1132 aa12.88□□□□□ -0.35
SMG9-202ENST00000594081 STK26Q9P289 416 aa12.88□□□□□ -0.35
SMG9-202ENST00000594081 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
SMG9-202ENST00000594081 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
SMG9-202ENST00000594081 ABCC11Q96J66 1382 aa12.87□□□□□ -0.35
SMG9-202ENST00000594081 A0A0G2JS52 829 aa12.87□□□□□ -0.35
SMG9-202ENST00000594081 ONECUT3O60422 494 aaPredicted RBP12.87□□□□□ -0.35
SMG9-202ENST00000594081 MYT1Q01538 1121 aa12.87□□□□□ -0.35
SMG9-202ENST00000594081 KRT28Q7Z3Y7 464 aa12.87□□□□□ -0.35
SMG9-202ENST00000594081 CABLES1Q8TDN4 633 aa12.87□□□□□ -0.35
SMG9-202ENST00000594081 COL14A1Q05707 1796 aaKnown RBP12.86□□□□□ -0.35
SMG9-202ENST00000594081 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
SMG9-202ENST00000594081 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
SMG9-202ENST00000594081 ARHGEF10O15013 1369 aa12.86□□□□□ -0.35
SMG9-202ENST00000594081 TRPM3Q9HCF6 1732 aaPredicted RBP12.86□□□□□ -0.35
SMG9-202ENST00000594081 PLEKHG5O94827 1062 aa12.86□□□□□ -0.35
SMG9-202ENST00000594081 YTHDC2Q9H6S0 1430 aaKnown RBP12.86□□□□□ -0.35
SMG9-202ENST00000594081 CRYBG1Q9Y4K1 1723 aa12.85□□□□□ -0.35
SMG9-202ENST00000594081 SBNO1A3KN83 1393 aa12.85□□□□□ -0.35
SMG9-202ENST00000594081 ALS2Q96Q42 1657 aa12.85□□□□□ -0.35
SMG9-202ENST00000594081 DISP2A7MBM2 1401 aa12.85□□□□□ -0.35
SMG9-202ENST00000594081 SPATA31E1Q6ZUB1 1445 aa12.85□□□□□ -0.35
SMG9-202ENST00000594081 ANKRD30BQ9BXX2 1392 aa12.84□□□□□ -0.35
SMG9-202ENST00000594081 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
SMG9-202ENST00000594081 PSME1Q06323 249 aa12.83□□□□□ -0.36
SMG9-202ENST00000594081 FAM98CQ17RN3 349 aaKnown RBP12.83□□□□□ -0.36
SMG9-202ENST00000594081 TMEM132EQ6IEE7 984 aa12.83□□□□□ -0.36
SMG9-202ENST00000594081 PPARGC1BQ86YN6 1023 aaKnown RBP12.83□□□□□ -0.36
SMG9-202ENST00000594081 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.36
SMG9-202ENST00000594081 EN1Q05925 392 aaPredicted RBP12.82□□□□□ -0.36
SMG9-202ENST00000594081 LMOD2Q6P5Q4 547 aa12.82□□□□□ -0.36
SMG9-202ENST00000594081 RREB1Q92766 1687 aa12.81□□□□□ -0.36
SMG9-202ENST00000594081 FAM83GA6ND36 823 aa12.81□□□□□ -0.36
SMG9-202ENST00000594081 R3HDM1Q15032 1099 aaKnown RBP12.81□□□□□ -0.36
SMG9-202ENST00000594081 ANKARQ7Z5J8 1434 aa12.8□□□□□ -0.36
SMG9-202ENST00000594081 NUP188Q5SRE5 1749 aa12.79□□□□□ -0.36
SMG9-202ENST00000594081 RGL3Q3MIN7 710 aa12.79□□□□□ -0.36
SMG9-202ENST00000594081 FAM182BQ5T319 152 aa12.79□□□□□ -0.36
SMG9-202ENST00000594081 BTG4Q9NY30 223 aa12.79□□□□□ -0.36
SMG9-202ENST00000594081 DLC1Q96QB1 1528 aa12.78□□□□□ -0.36
SMG9-202ENST00000594081 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.36
SMG9-202ENST00000594081 SPATA31A5Q5VU36 1347 aa12.77□□□□□ -0.37
SMG9-202ENST00000594081 SPATA31A7Q8IWB4 1347 aa12.77□□□□□ -0.37
SMG9-202ENST00000594081 EZH2Q15910 746 aaKnown RBP12.76□□□□□ -0.37
SMG9-202ENST00000594081 SIRT1Q96EB6 747 aa12.76□□□□□ -0.37
SMG9-202ENST00000594081 SAFB2Q14151 953 aaKnown RBP eCLIP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms