RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 CDC42BPGQ6DT37 1551 aa29.02■■■□□ 2.24
COPE-204ENST00000593827 POGKQ9P215 609 aa29.02■■■□□ 2.24
COPE-204ENST00000593827 SPATA31A6Q5VVP1 1343 aa29.01■■■□□ 2.23
COPE-204ENST00000593827 LRRC59Q96AG4 307 aaKnown RBP29.01■■■□□ 2.23
COPE-204ENST00000593827 COL16A1Q07092 1604 aaPredicted RBP29■■■□□ 2.23
COPE-204ENST00000593827 PRAM1Q96QH2 718 aa28.99■■■□□ 2.23
COPE-204ENST00000593827 DLC1Q96QB1 1528 aa28.98■■■□□ 2.23
COPE-204ENST00000593827 PLEKHH1Q9ULM0 1364 aa28.98■■■□□ 2.23
COPE-204ENST00000593827 ESCO1Q5FWF5 840 aa28.96■■■□□ 2.23
COPE-204ENST00000593827 ORAI2Q96SN7 254 aa28.96■■■□□ 2.23
COPE-204ENST00000593827 TRAK1Q9UPV9 953 aa28.95■■■□□ 2.22
COPE-204ENST00000593827 ADGRB1O14514 1584 aa28.95■■■□□ 2.22
COPE-204ENST00000593827 NPHP3Q7Z494 1330 aa28.93■■■□□ 2.22
COPE-204ENST00000593827 SAFB2Q14151 953 aaKnown RBP eCLIP28.91■■■□□ 2.22
COPE-204ENST00000593827 NHSL1Q5SYE7 1610 aa28.91■■■□□ 2.22
COPE-204ENST00000593827 MEX3CQ5U5Q3 659 aaKnown RBP28.89■■■□□ 2.22
COPE-204ENST00000593827 NEUROD1Q13562 356 aa28.88■■■□□ 2.21
COPE-204ENST00000593827 SOS2Q07890 1332 aaPredicted RBP28.88■■■□□ 2.21
COPE-204ENST00000593827 EIF3AQ14152 1382 aaKnown RBP28.88■■■□□ 2.21
COPE-204ENST00000593827 NUTM2FA1L443 756 aa28.87■■■□□ 2.21
COPE-204ENST00000593827 DDX17Q92841 729 aaKnown RBP28.87■■■□□ 2.21
COPE-204ENST00000593827 L3MBTL2Q969R5 705 aa28.86■■■□□ 2.21
COPE-204ENST00000593827 SIN3AQ96ST3 1273 aa28.86■■■□□ 2.21
COPE-204ENST00000593827 SHPRHQ149N8 1683 aa28.86■■■□□ 2.21
COPE-204ENST00000593827 FOXO3O43524 673 aa28.82■■■□□ 2.2
COPE-204ENST00000593827 KIAA1210Q9ULL0 1709 aa28.81■■■□□ 2.2
COPE-204ENST00000593827 PNPLA6Q8IY17 1366 aa28.81■■■□□ 2.2
COPE-204ENST00000593827 NUTM2BA6NNL0 878 aaPredicted RBP28.81■■■□□ 2.2
COPE-204ENST00000593827 NUTM2EB1AL46 878 aaPredicted RBP28.81■■■□□ 2.2
COPE-204ENST00000593827 NUTM2AQ8IVF1 878 aaPredicted RBP28.81■■■□□ 2.2
COPE-204ENST00000593827 ANKARQ7Z5J8 1434 aa28.8■■■□□ 2.2
COPE-204ENST00000593827 FMN2Q9NZ56 1722 aa28.8■■■□□ 2.2
COPE-204ENST00000593827 MINK1Q8N4C8 1332 aaPredicted RBP28.79■■■□□ 2.2
COPE-204ENST00000593827 PHF8Q9UPP1 1060 aa28.78■■■□□ 2.2
COPE-204ENST00000593827 ADGRB2O60241 1585 aa28.78■■■□□ 2.2
COPE-204ENST00000593827 HIRIP3Q9BW71 556 aaPredicted RBP28.77■■■□□ 2.2
COPE-204ENST00000593827 WASLO00401 505 aaPredicted RBP28.76■■■□□ 2.19
COPE-204ENST00000593827 PSME1Q06323 249 aa28.76■■■□□ 2.19
COPE-204ENST00000593827 ZNF772Q68DY9 489 aaPredicted RBP28.76■■■□□ 2.19
COPE-204ENST00000593827 RGS17Q9UGC6 210 aaPredicted RBP28.76■■■□□ 2.19
COPE-204ENST00000593827 KIF1AQ12756 1690 aa28.75■■■□□ 2.19
COPE-204ENST00000593827 LRP6O75581 1613 aa28.74■■■□□ 2.19
COPE-204ENST00000593827 NBPF1Q3BBV0 1214 aa28.74■■■□□ 2.19
COPE-204ENST00000593827 TONSLQ96HA7 1378 aa28.72■■■□□ 2.19
COPE-204ENST00000593827 PXDNQ92626 1479 aa28.72■■■□□ 2.19
COPE-204ENST00000593827 KRT28Q7Z3Y7 464 aa28.71■■■□□ 2.19
COPE-204ENST00000593827 XPCQ01831 940 aaPredicted RBP28.7■■■□□ 2.18
COPE-204ENST00000593827 TULP4Q9NRJ4 1543 aa28.69■■■□□ 2.18
COPE-204ENST00000593827 CENPJQ9HC77 1338 aaPredicted RBP28.68■■■□□ 2.18
COPE-204ENST00000593827 ROCK2O75116 1388 aaKnown RBP28.67■■■□□ 2.18
COPE-204ENST00000593827 ARHGEF28Q8N1W1 1705 aaKnown RBP28.67■■■□□ 2.18
COPE-204ENST00000593827 POTEAQ6S8J7 498 aa28.66■■■□□ 2.18
COPE-204ENST00000593827 SPATA31A3Q5VYP0 1347 aa28.66■■■□□ 2.18
COPE-204ENST00000593827 GPRASP1Q5JY77 1395 aa28.65■■■□□ 2.18
COPE-204ENST00000593827 PMFBP1Q8TBY8 1022 aa28.64■■■□□ 2.18
COPE-204ENST00000593827 C8orf37Q96NL8 207 aa28.64■■■□□ 2.18
COPE-204ENST00000593827 SBNO1A3KN83 1393 aa28.63■■■□□ 2.17
COPE-204ENST00000593827 ADAMTS2O95450 1211 aa28.63■■■□□ 2.17
COPE-204ENST00000593827 CDK19Q9BWU1 502 aa28.63■■■□□ 2.17
COPE-204ENST00000593827 NGDNQ8NEJ9 315 aaKnown RBP28.62■■■□□ 2.17
COPE-204ENST00000593827 NGLY1Q96IV0 654 aa28.62■■■□□ 2.17
COPE-204ENST00000593827 AFF2P51816 1311 aa28.62■■■□□ 2.17
COPE-204ENST00000593827 NUDT16Q96DE0 195 aaKnown RBP28.61■■■□□ 2.17
COPE-204ENST00000593827 ARHGEF10O15013 1369 aa28.61■■■□□ 2.17
COPE-204ENST00000593827 COL22A1Q8NFW1 1626 aaPredicted RBP28.6■■■□□ 2.17
COPE-204ENST00000593827 PRR36Q9H6K5 1346 aa28.6■■■□□ 2.17
COPE-204ENST00000593827 TNS3Q68CZ2 1445 aa28.6■■■□□ 2.17
COPE-204ENST00000593827 CCDC61Q9Y6R9 512 aa28.58■■■□□ 2.17
COPE-204ENST00000593827 HAP1P54257 671 aaPredicted RBP28.57■■■□□ 2.16
COPE-204ENST00000593827 LMOD2Q6P5Q4 547 aa28.57■■■□□ 2.16
COPE-204ENST00000593827 USP32Q8NFA0 1604 aa28.57■■■□□ 2.16
COPE-204ENST00000593827 SRPK2P78362 688 aaKnown RBP28.56■■■□□ 2.16
COPE-204ENST00000593827 TRPM1Q7Z4N2 1603 aa28.56■■■□□ 2.16
COPE-204ENST00000593827 ATP7BP35670 1465 aa28.54■■■□□ 2.16
COPE-204ENST00000593827 RXRBP28702 533 aa28.54■■■□□ 2.16
COPE-204ENST00000593827 RGPD8O14715 1765 aaPredicted RBP28.53■■■□□ 2.16
COPE-204ENST00000593827 CLSPNQ9HAW4 1339 aa28.53■■■□□ 2.16
COPE-204ENST00000593827 NBPF8Q3BBV2 869 aa28.53■■■□□ 2.16
COPE-204ENST00000593827 EVC2Q86UK5 1308 aa28.52■■■□□ 2.16
COPE-204ENST00000593827 CARD11Q9BXL7 1154 aa28.52■■■□□ 2.16
COPE-204ENST00000593827 PCGF6Q9BYE7 350 aa28.52■■■□□ 2.16
COPE-204ENST00000593827 FNBP4Q8N3X1 1017 aaPredicted RBP28.5■■■□□ 2.15
COPE-204ENST00000593827 QTRT2Q9H974 415 aaKnown RBP28.5■■■□□ 2.15
COPE-204ENST00000593827 USP21Q9UK80 565 aa28.5■■■□□ 2.15
COPE-204ENST00000593827 ITSN1Q15811 1721 aa28.49■■■□□ 2.15
COPE-204ENST00000593827 PLEKHG3A1L390 1219 aa28.49■■■□□ 2.15
COPE-204ENST00000593827 PAK3O75914 559 aaPredicted RBP28.48■■■□□ 2.15
COPE-204ENST00000593827 RBM6P78332 1123 aaKnown RBP28.46■■■□□ 2.15
COPE-204ENST00000593827 TRPC5Q9UL62 973 aaPredicted RBP28.46■■■□□ 2.15
COPE-204ENST00000593827 TIMELESSQ9UNS1 1208 aa28.46■■■□□ 2.15
COPE-204ENST00000593827 POLR3AO14802 1390 aaPredicted RBP28.46■■■□□ 2.15
COPE-204ENST00000593827 RALGAPBQ86X10 1494 aa28.46■■■□□ 2.15
COPE-204ENST00000593827 CABP2Q9NPB3 220 aa28.45■■■□□ 2.14
COPE-204ENST00000593827 ACEP12821 1306 aa28.44■■■□□ 2.14
COPE-204ENST00000593827 QRICH2Q9H0J4 1663 aa28.44■■■□□ 2.14
COPE-204ENST00000593827 CDK12Q9NYV4 1490 aaPredicted RBP28.42■■■□□ 2.14
COPE-204ENST00000593827 PPIP5K1Q6PFW1 1433 aa28.42■■■□□ 2.14
COPE-204ENST00000593827 BRD4O60885 1362 aaPredicted RBP28.4■■■□□ 2.14
COPE-204ENST00000593827 SBNO2Q9Y2G9 1366 aa28.4■■■□□ 2.14
COPE-204ENST00000593827 SLC24A1O60721 1099 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms