RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 CADPS2Q86UW7 1296 aa29.55■■■□□ 2.32
DNMT1-227ENST00000592342 PIP4K2BP78356 416 aa29.53■■■□□ 2.32
DNMT1-227ENST00000592342 CARD11Q9BXL7 1154 aa29.53■■■□□ 2.32
DNMT1-227ENST00000592342 RALGAPBQ86X10 1494 aa29.52■■■□□ 2.32
DNMT1-227ENST00000592342 DCCP43146 1447 aa29.51■■■□□ 2.31
DNMT1-227ENST00000592342 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.51■■■□□ 2.31
DNMT1-227ENST00000592342 NALCNQ8IZF0 1738 aa29.5■■■□□ 2.31
DNMT1-227ENST00000592342 GPRASP1Q5JY77 1395 aa29.48■■■□□ 2.31
DNMT1-227ENST00000592342 SLAIN2Q9P270 581 aa29.47■■■□□ 2.31
DNMT1-227ENST00000592342 ARHGEF28Q8N1W1 1705 aaKnown RBP29.45■■■□□ 2.31
DNMT1-227ENST00000592342 EIF3AQ14152 1382 aaKnown RBP29.45■■■□□ 2.31
DNMT1-227ENST00000592342 MINK1Q8N4C8 1332 aaPredicted RBP29.45■■■□□ 2.3
DNMT1-227ENST00000592342 CENPJQ9HC77 1338 aaPredicted RBP29.44■■■□□ 2.3
DNMT1-227ENST00000592342 HIRIP3Q9BW71 556 aaPredicted RBP29.42■■■□□ 2.3
DNMT1-227ENST00000592342 CDC42BPGQ6DT37 1551 aa29.4■■■□□ 2.3
DNMT1-227ENST00000592342 ILDR1Q86SU0 546 aaPredicted RBP29.39■■■□□ 2.3
DNMT1-227ENST00000592342 MST1RQ04912 1400 aa29.38■■■□□ 2.29
DNMT1-227ENST00000592342 NUTM2FA1L443 756 aa29.36■■■□□ 2.29
DNMT1-227ENST00000592342 WASLO00401 505 aaPredicted RBP29.33■■■□□ 2.29
DNMT1-227ENST00000592342 C1orf167Q5SNV9 1468 aa29.33■■■□□ 2.29
DNMT1-227ENST00000592342 ADGRB2O60241 1585 aa29.33■■■□□ 2.29
DNMT1-227ENST00000592342 ROBO1Q9Y6N7 1651 aa29.31■■■□□ 2.28
DNMT1-227ENST00000592342 QRICH2Q9H0J4 1663 aa29.3■■■□□ 2.28
DNMT1-227ENST00000592342 ESCO1Q5FWF5 840 aa29.29■■■□□ 2.28
DNMT1-227ENST00000592342 BRINP3Q76B58 766 aa29.29■■■□□ 2.28
DNMT1-227ENST00000592342 FMN2Q9NZ56 1722 aa29.28■■■□□ 2.28
DNMT1-227ENST00000592342 USP47Q96K76 1375 aa29.27■■■□□ 2.28
DNMT1-227ENST00000592342 ORAI2Q96SN7 254 aa29.27■■■□□ 2.28
DNMT1-227ENST00000592342 CDK19Q9BWU1 502 aa29.27■■■□□ 2.28
DNMT1-227ENST00000592342 ST20-MTHFSA0A0A6YYL1 179 aa29.24■■■□□ 2.27
DNMT1-227ENST00000592342 HSPA1LP34931 641 aa29.24■■■□□ 2.27
DNMT1-227ENST00000592342 SRPK2P78362 688 aaKnown RBP29.24■■■□□ 2.27
DNMT1-227ENST00000592342 EVC2Q86UK5 1308 aa29.23■■■□□ 2.27
DNMT1-227ENST00000592342 ANKARQ7Z5J8 1434 aa29.23■■■□□ 2.27
DNMT1-227ENST00000592342 TULP4Q9NRJ4 1543 aa29.22■■■□□ 2.27
DNMT1-227ENST00000592342 SBNO2Q9Y2G9 1366 aa29.2■■■□□ 2.26
DNMT1-227ENST00000592342 NUDT16Q96DE0 195 aaKnown RBP29.19■■■□□ 2.26
DNMT1-227ENST00000592342 CABP2Q9NPB3 220 aa29.19■■■□□ 2.26
DNMT1-227ENST00000592342 PHF8Q9UPP1 1060 aa29.18■■■□□ 2.26
DNMT1-227ENST00000592342 PRR36Q9H6K5 1346 aa29.18■■■□□ 2.26
DNMT1-227ENST00000592342 SLC24A1O60721 1099 aa29.17■■■□□ 2.26
DNMT1-227ENST00000592342 EIF4G2P78344 907 aaKnown RBP eCLIP29.17■■■□□ 2.26
DNMT1-227ENST00000592342 USP32Q8NFA0 1604 aa29.14■■■□□ 2.26
DNMT1-227ENST00000592342 PMFBP1Q8TBY8 1022 aa29.14■■■□□ 2.26
DNMT1-227ENST00000592342 DDX17Q92841 729 aaKnown RBP29.14■■■□□ 2.26
DNMT1-227ENST00000592342 NPHP3Q7Z494 1330 aa29.14■■■□□ 2.25
DNMT1-227ENST00000592342 ATP7BP35670 1465 aa29.13■■■□□ 2.25
DNMT1-227ENST00000592342 FOXO3O43524 673 aa29.13■■■□□ 2.25
DNMT1-227ENST00000592342 TESK2Q96S53 571 aa29.13■■■□□ 2.25
DNMT1-227ENST00000592342 CCDC61Q9Y6R9 512 aa29.13■■■□□ 2.25
DNMT1-227ENST00000592342 PHLPP1O60346 1717 aa29.13■■■□□ 2.25
DNMT1-227ENST00000592342 AHDC1Q5TGY3 1603 aaPredicted RBP29.12■■■□□ 2.25
DNMT1-227ENST00000592342 RGPD8O14715 1765 aaPredicted RBP29.12■■■□□ 2.25
DNMT1-227ENST00000592342 KIF1AQ12756 1690 aa29.11■■■□□ 2.25
DNMT1-227ENST00000592342 TMF1P82094 1093 aa29.1■■■□□ 2.25
DNMT1-227ENST00000592342 HSPA5P11021 654 aaKnown RBP29.09■■■□□ 2.25
DNMT1-227ENST00000592342 NGDNQ8NEJ9 315 aaKnown RBP29.09■■■□□ 2.25
DNMT1-227ENST00000592342 NHSL1Q5SYE7 1610 aa29.09■■■□□ 2.25
DNMT1-227ENST00000592342 XPCQ01831 940 aaPredicted RBP29.07■■■□□ 2.24
DNMT1-227ENST00000592342 ITSN1Q15811 1721 aa29.07■■■□□ 2.24
DNMT1-227ENST00000592342 ATAD2Q6PL18 1390 aa29.06■■■□□ 2.24
DNMT1-227ENST00000592342 PSME1Q06323 249 aa29.06■■■□□ 2.24
DNMT1-227ENST00000592342 PPIP5K1Q6PFW1 1433 aa29.05■■■□□ 2.24
DNMT1-227ENST00000592342 LRRC59Q96AG4 307 aaKnown RBP29.05■■■□□ 2.24
DNMT1-227ENST00000592342 SOS2Q07890 1332 aaPredicted RBP29.04■■■□□ 2.24
DNMT1-227ENST00000592342 ZEB1P37275 1124 aaPredicted RBP29.04■■■□□ 2.24
DNMT1-227ENST00000592342 KRT28Q7Z3Y7 464 aa29.04■■■□□ 2.24
DNMT1-227ENST00000592342 COL16A1Q07092 1604 aaPredicted RBP29.04■■■□□ 2.24
DNMT1-227ENST00000592342 CABP1Q9NZU7 370 aa29.03■■■□□ 2.24
DNMT1-227ENST00000592342 PLEKHG3A1L390 1219 aa29.02■■■□□ 2.24
DNMT1-227ENST00000592342 CDCA8Q53HL2 280 aa29.02■■■□□ 2.24
DNMT1-227ENST00000592342 PUS7Q96PZ0 661 aaKnown RBP29.01■■■□□ 2.23
DNMT1-227ENST00000592342 TOPAZ1Q8N9V7 1692 aa29.01■■■□□ 2.23
DNMT1-227ENST00000592342 DISP3Q9P2K9 1392 aa29.01■■■□□ 2.23
DNMT1-227ENST00000592342 ACEP12821 1306 aa29■■■□□ 2.23
DNMT1-227ENST00000592342 JCADQ9P266 1359 aa29■■■□□ 2.23
DNMT1-227ENST00000592342 TMC1Q8TDI8 760 aa28.99■■■□□ 2.23
DNMT1-227ENST00000592342 PXDNQ92626 1479 aa28.98■■■□□ 2.23
DNMT1-227ENST00000592342 POLR3AO14802 1390 aaPredicted RBP28.96■■■□□ 2.23
DNMT1-227ENST00000592342 PAK3O75914 559 aaPredicted RBP28.93■■■□□ 2.22
DNMT1-227ENST00000592342 LMOD2Q6P5Q4 547 aa28.93■■■□□ 2.22
DNMT1-227ENST00000592342 POLR3GLQ9BT43 218 aa28.92■■■□□ 2.22
DNMT1-227ENST00000592342 SBNO1A3KN83 1393 aa28.91■■■□□ 2.22
DNMT1-227ENST00000592342 SPATA31A3Q5VYP0 1347 aa28.91■■■□□ 2.22
DNMT1-227ENST00000592342 ZNF692Q9BU19 519 aaPredicted RBP28.9■■■□□ 2.22
DNMT1-227ENST00000592342 SLC12A5Q9H2X9 1139 aa28.9■■■□□ 2.22
DNMT1-227ENST00000592342 PNPLA6Q8IY17 1366 aa28.89■■■□□ 2.22
DNMT1-227ENST00000592342 TNS3Q68CZ2 1445 aa28.89■■■□□ 2.22
DNMT1-227ENST00000592342 NINLQ9Y2I6 1382 aa28.88■■■□□ 2.21
DNMT1-227ENST00000592342 HDGFL2Q7Z4V5 671 aaPredicted RBP28.88■■■□□ 2.21
DNMT1-227ENST00000592342 TERF2IPQ9NYB0 399 aa28.87■■■□□ 2.21
DNMT1-227ENST00000592342 SPATA31A6Q5VVP1 1343 aa28.87■■■□□ 2.21
DNMT1-227ENST00000592342 SHPRHQ149N8 1683 aa28.86■■■□□ 2.21
DNMT1-227ENST00000592342 ARHGEF10O15013 1369 aa28.85■■■□□ 2.21
DNMT1-227ENST00000592342 USP6P35125 1406 aa28.85■■■□□ 2.21
DNMT1-227ENST00000592342 NUTM2BA6NNL0 878 aaPredicted RBP28.84■■■□□ 2.21
DNMT1-227ENST00000592342 NUTM2EB1AL46 878 aaPredicted RBP28.84■■■□□ 2.21
DNMT1-227ENST00000592342 NUTM2AQ8IVF1 878 aaPredicted RBP28.84■■■□□ 2.21
DNMT1-227ENST00000592342 KTN1Q86UP2 1357 aaKnown RBP28.84■■■□□ 2.21
DNMT1-227ENST00000592342 BRD4O60885 1362 aaPredicted RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms