RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 CNTLNQ9NXG0 1405 aa11.49□□□□□ -0.57
SDF2-210ENST00000592250 UNC13BO14795 1591 aa11.49□□□□□ -0.57
SDF2-210ENST00000592250 VWDEQ8N2E2 1590 aa11.49□□□□□ -0.57
SDF2-210ENST00000592250 G3V3G9 751 aa11.48□□□□□ -0.57
SDF2-210ENST00000592250 MROH2AA6NES4 1674 aa11.48□□□□□ -0.57
SDF2-210ENST00000592250 CLTCQ00610 1675 aaKnown RBP11.48□□□□□ -0.57
SDF2-210ENST00000592250 ZC3H13Q5T200 1668 aaKnown RBP11.48□□□□□ -0.57
SDF2-210ENST00000592250 ABCC3O15438 1527 aa11.47□□□□□ -0.57
SDF2-210ENST00000592250 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
SDF2-210ENST00000592250 LMTK2Q8IWU2 1503 aa11.46□□□□□ -0.57
SDF2-210ENST00000592250 UHRF1BP1Q6BDS2 1440 aa11.46□□□□□ -0.57
SDF2-210ENST00000592250 ZMYM3Q14202 1370 aa11.46□□□□□ -0.57
SDF2-210ENST00000592250 NKX1-1Q15270 411 aaPredicted RBP11.46□□□□□ -0.57
SDF2-210ENST00000592250 TRIM52Q96A61 297 aa11.46□□□□□ -0.57
SDF2-210ENST00000592250 C3P01024 1663 aa11.46□□□□□ -0.58
SDF2-210ENST00000592250 ANKRD30BQ9BXX2 1392 aa11.45□□□□□ -0.58
SDF2-210ENST00000592250 WASHC2CQ9Y4E1 1318 aa11.45□□□□□ -0.58
SDF2-210ENST00000592250 MICALL2Q8IY33 904 aa11.45□□□□□ -0.58
SDF2-210ENST00000592250 PREX1Q8TCU6 1659 aa11.44□□□□□ -0.58
SDF2-210ENST00000592250 ESF1Q9H501 851 aaKnown RBP11.44□□□□□ -0.58
SDF2-210ENST00000592250 CEP152O94986 1710 aa11.43□□□□□ -0.58
SDF2-210ENST00000592250 NUP155O75694 1391 aa11.43□□□□□ -0.58
SDF2-210ENST00000592250 CAMSAP1Q5T5Y3 1602 aa11.43□□□□□ -0.58
SDF2-210ENST00000592250 IQGAP3Q86VI3 1631 aa11.43□□□□□ -0.58
SDF2-210ENST00000592250 SIN3AQ96ST3 1273 aa11.43□□□□□ -0.58
SDF2-210ENST00000592250 ARHGAP31Q2M1Z3 1444 aa11.43□□□□□ -0.58
SDF2-210ENST00000592250 KANK1Q14678 1352 aa11.42□□□□□ -0.58
SDF2-210ENST00000592250 PPP1R37O75864 691 aa11.42□□□□□ -0.58
SDF2-210ENST00000592250 TIMELESSQ9UNS1 1208 aa11.42□□□□□ -0.58
SDF2-210ENST00000592250 EFCAB6Q5THR3 1501 aa11.41□□□□□ -0.58
SDF2-210ENST00000592250 STRCQ7RTU9 1775 aa11.4□□□□□ -0.58
SDF2-210ENST00000592250 NPATQ14207 1427 aa11.4□□□□□ -0.58
SDF2-210ENST00000592250 TET3O43151 1660 aa11.4□□□□□ -0.59
SDF2-210ENST00000592250 RPRD2Q5VT52 1461 aaKnown RBP11.38□□□□□ -0.59
SDF2-210ENST00000592250 UBAP1LF5GYI3 381 aa11.38□□□□□ -0.59
SDF2-210ENST00000592250 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
SDF2-210ENST00000592250 FBXO31Q5XUX0 539 aaPredicted RBP11.37□□□□□ -0.59
SDF2-210ENST00000592250 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
SDF2-210ENST00000592250 ERVK-7P63135 1459 aa11.37□□□□□ -0.59
SDF2-210ENST00000592250 PLA2R1Q13018 1463 aa11.37□□□□□ -0.59
SDF2-210ENST00000592250 E9PCH4 1651 aa11.36□□□□□ -0.59
SDF2-210ENST00000592250 PTPRTO14522 1441 aa11.36□□□□□ -0.59
SDF2-210ENST00000592250 SETD1BQ9UPS6 1966 aaKnown RBP11.36□□□□□ -0.59
SDF2-210ENST00000592250 NOS1P29475 1434 aa11.35□□□□□ -0.59
SDF2-210ENST00000592250 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
SDF2-210ENST00000592250 PPP1R15AO75807 674 aaPredicted RBP11.34□□□□□ -0.59
SDF2-210ENST00000592250 NEUROD1Q13562 356 aa11.34□□□□□ -0.59
SDF2-210ENST00000592250 LCE2DQ5TA82 110 aaPredicted RBP11.34□□□□□ -0.59
SDF2-210ENST00000592250 MYO3AQ8NEV4 1616 aa11.34□□□□□ -0.59
SDF2-210ENST00000592250 ZNF335Q9H4Z2 1342 aaPredicted RBP11.34□□□□□ -0.59
SDF2-210ENST00000592250 SYNMO15061 1565 aa11.33□□□□□ -0.6
SDF2-210ENST00000592250 TNRQ92752 1358 aa11.33□□□□□ -0.6
SDF2-210ENST00000592250 LTBP4Q8N2S1 1624 aa11.33□□□□□ -0.6
SDF2-210ENST00000592250 GTPBP6O43824 516 aaPredicted RBP11.32□□□□□ -0.6
SDF2-210ENST00000592250 ZNF142P52746 1687 aaPredicted RBP11.32□□□□□ -0.6
SDF2-210ENST00000592250 NLRP1Q9C000 1473 aa11.32□□□□□ -0.6
SDF2-210ENST00000592250 CEP170BQ9Y4F5 1589 aaPredicted RBP11.31□□□□□ -0.6
SDF2-210ENST00000592250 PIP4K2BP78356 416 aa11.3□□□□□ -0.6
SDF2-210ENST00000592250 PIK3C2BO00750 1634 aa11.3□□□□□ -0.6
SDF2-210ENST00000592250 A2ML1A8K2U0 1454 aa11.3□□□□□ -0.6
SDF2-210ENST00000592250 SPHKAPQ2M3C7 1700 aa11.29□□□□□ -0.6
SDF2-210ENST00000592250 L3MBTL2Q969R5 705 aa11.29□□□□□ -0.6
SDF2-210ENST00000592250 TONSLQ96HA7 1378 aa11.28□□□□□ -0.6
SDF2-210ENST00000592250 SNPHO15079 494 aa11.28□□□□□ -0.6
SDF2-210ENST00000592250 RYDENQ9NUL5 291 aaKnown RBP11.28□□□□□ -0.6
SDF2-210ENST00000592250 SLC52A1Q9NWF4 448 aa11.28□□□□□ -0.6
SDF2-210ENST00000592250 TRPM2O94759 1503 aa11.28□□□□□ -0.6
SDF2-210ENST00000592250 UGGT1Q9NYU2 1555 aa11.28□□□□□ -0.6
SDF2-210ENST00000592250 KDM5AP29375 1690 aaKnown RBP11.27□□□□□ -0.6
SDF2-210ENST00000592250 CFAP65Q6ZU64 1925 aaKnown RBP11.27□□□□□ -0.6
SDF2-210ENST00000592250 IQSEC2Q5JU85 1478 aa11.27□□□□□ -0.6
SDF2-210ENST00000592250 ST18O60284 1047 aa11.27□□□□□ -0.61
SDF2-210ENST00000592250 IDI1Q13907 227 aa11.27□□□□□ -0.61
SDF2-210ENST00000592250 UBR1Q8IWV7 1749 aa11.26□□□□□ -0.61
SDF2-210ENST00000592250 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
SDF2-210ENST00000592250 NEURL4Q96JN8 1562 aa11.25□□□□□ -0.61
SDF2-210ENST00000592250 CLTCL1P53675 1640 aa11.25□□□□□ -0.61
SDF2-210ENST00000592250 HSPA1LP34931 641 aa11.25□□□□□ -0.61
SDF2-210ENST00000592250 CCDC144AA2RUR9 1427 aa11.25□□□□□ -0.61
SDF2-210ENST00000592250 SPATA31E1Q6ZUB1 1445 aa11.25□□□□□ -0.61
SDF2-210ENST00000592250 ADGRB3O60242 1522 aa11.25□□□□□ -0.61
SDF2-210ENST00000592250 TMEM131LA2VDJ0 1609 aa11.24□□□□□ -0.61
SDF2-210ENST00000592250 HOXB3P14651 431 aaPredicted RBP11.24□□□□□ -0.61
SDF2-210ENST00000592250 C2orf72A6NCS6 295 aa11.23□□□□□ -0.61
SDF2-210ENST00000592250 KIF3CO14782 793 aa11.23□□□□□ -0.61
SDF2-210ENST00000592250 NBPF8Q3BBV2 869 aa11.23□□□□□ -0.61
SDF2-210ENST00000592250 THEMISQ8N1K5 641 aaPredicted RBP11.23□□□□□ -0.61
SDF2-210ENST00000592250 SLIT1O75093 1534 aa11.22□□□□□ -0.61
SDF2-210ENST00000592250 ARHGAP23Q9P227 1491 aa11.22□□□□□ -0.61
SDF2-210ENST00000592250 MED1Q15648 1581 aaPredicted RBP11.21□□□□□ -0.61
SDF2-210ENST00000592250 TMEM2Q9UHN6 1383 aa11.2□□□□□ -0.62
SDF2-210ENST00000592250 ZNF316A6NFI3 1004 aaPredicted RBP11.2□□□□□ -0.62
SDF2-210ENST00000592250 POTEMA6NI47 508 aa11.2□□□□□ -0.62
SDF2-210ENST00000592250 POTEGQ6S5H5 508 aa11.2□□□□□ -0.62
SDF2-210ENST00000592250 ZFYVE9O95405 1425 aa11.18□□□□□ -0.62
SDF2-210ENST00000592250 TOM1O60784 492 aa11.18□□□□□ -0.62
SDF2-210ENST00000592250 TMC2Q8TDI7 906 aa11.18□□□□□ -0.62
SDF2-210ENST00000592250 MYO5BQ9ULV0 1848 aa11.18□□□□□ -0.62
SDF2-210ENST00000592250 MED14O60244 1454 aa11.18□□□□□ -0.62
SDF2-210ENST00000592250 KIF1BO60333 1816 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms