RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 NHSL1Q5SYE7 1610 aa39.64■■■■□ 3.94
SMAD4-213ENST00000591914 JCADQ9P266 1359 aa39.63■■■■□ 3.93
SMAD4-213ENST00000591914 ILDR2Q71H61 639 aa39.59■■■■□ 3.93
SMAD4-213ENST00000591914 DLC1Q96QB1 1528 aa39.59■■■■□ 3.93
SMAD4-213ENST00000591914 ORAI2Q96SN7 254 aa39.53■■■■□ 3.92
SMAD4-213ENST00000591914 SHPRHQ149N8 1683 aa39.52■■■■□ 3.92
SMAD4-213ENST00000591914 PRAM1Q96QH2 718 aa39.51■■■■□ 3.92
SMAD4-213ENST00000591914 PHF23Q9BUL5 403 aaPredicted RBP39.51■■■■□ 3.92
SMAD4-213ENST00000591914 DDX17Q92841 729 aaKnown RBP39.49■■■■□ 3.91
SMAD4-213ENST00000591914 FMN2Q9NZ56 1722 aa39.48■■■■□ 3.91
SMAD4-213ENST00000591914 KIAA1210Q9ULL0 1709 aa39.47■■■■□ 3.91
SMAD4-213ENST00000591914 TRAK1Q9UPV9 953 aa39.46■■■■□ 3.91
SMAD4-213ENST00000591914 SPATA31A6Q5VVP1 1343 aa39.45■■■■□ 3.91
SMAD4-213ENST00000591914 SIN3AQ96ST3 1273 aa39.45■■■■□ 3.91
SMAD4-213ENST00000591914 POGKQ9P215 609 aa39.43■■■■□ 3.9
SMAD4-213ENST00000591914 SAFB2Q14151 953 aaKnown RBP eCLIP39.42■■■■□ 3.9
SMAD4-213ENST00000591914 LRRC59Q96AG4 307 aaKnown RBP39.42■■■■□ 3.9
SMAD4-213ENST00000591914 ESCO1Q5FWF5 840 aa39.41■■■■□ 3.9
SMAD4-213ENST00000591914 ADGRB2O60241 1585 aa39.4■■■■□ 3.9
SMAD4-213ENST00000591914 NUTM2FA1L443 756 aa39.39■■■■□ 3.9
SMAD4-213ENST00000591914 L3MBTL2Q969R5 705 aa39.39■■■■□ 3.9
SMAD4-213ENST00000591914 SOS2Q07890 1332 aaPredicted RBP39.39■■■■□ 3.9
SMAD4-213ENST00000591914 LRP6O75581 1613 aa39.38■■■■□ 3.89
SMAD4-213ENST00000591914 RGS17Q9UGC6 210 aaPredicted RBP39.37■■■■□ 3.89
SMAD4-213ENST00000591914 ARHGEF28Q8N1W1 1705 aaKnown RBP39.37■■■■□ 3.89
SMAD4-213ENST00000591914 NEUROD1Q13562 356 aa39.34■■■■□ 3.89
SMAD4-213ENST00000591914 NPHP3Q7Z494 1330 aa39.33■■■■□ 3.89
SMAD4-213ENST00000591914 PNPLA6Q8IY17 1366 aa39.33■■■■□ 3.89
SMAD4-213ENST00000591914 KIF1AQ12756 1690 aa39.31■■■■□ 3.88
SMAD4-213ENST00000591914 PXDNQ92626 1479 aa39.3■■■■□ 3.88
SMAD4-213ENST00000591914 NBPF1Q3BBV0 1214 aa39.29■■■■□ 3.88
SMAD4-213ENST00000591914 RGPD8O14715 1765 aaPredicted RBP39.28■■■■□ 3.88
SMAD4-213ENST00000591914 FOXO3O43524 673 aa39.27■■■■□ 3.88
SMAD4-213ENST00000591914 ANKARQ7Z5J8 1434 aa39.26■■■■□ 3.88
SMAD4-213ENST00000591914 MINK1Q8N4C8 1332 aaPredicted RBP39.26■■■■□ 3.88
SMAD4-213ENST00000591914 HIRIP3Q9BW71 556 aaPredicted RBP39.25■■■■□ 3.87
SMAD4-213ENST00000591914 USP32Q8NFA0 1604 aa39.25■■■■□ 3.87
SMAD4-213ENST00000591914 NUTM2BA6NNL0 878 aaPredicted RBP39.22■■■■□ 3.87
SMAD4-213ENST00000591914 NUTM2EB1AL46 878 aaPredicted RBP39.22■■■■□ 3.87
SMAD4-213ENST00000591914 NUTM2AQ8IVF1 878 aaPredicted RBP39.22■■■■□ 3.87
SMAD4-213ENST00000591914 MEX3CQ5U5Q3 659 aaKnown RBP39.21■■■■□ 3.87
SMAD4-213ENST00000591914 SOCS7O14512 581 aa39.2■■■■□ 3.87
SMAD4-213ENST00000591914 EIF3AQ14152 1382 aaKnown RBP39.2■■■■□ 3.87
SMAD4-213ENST00000591914 PHF8Q9UPP1 1060 aa39.19■■■■□ 3.86
SMAD4-213ENST00000591914 TRPM1Q7Z4N2 1603 aa39.18■■■■□ 3.86
SMAD4-213ENST00000591914 WASLO00401 505 aaPredicted RBP39.18■■■■□ 3.86
SMAD4-213ENST00000591914 XPCQ01831 940 aaPredicted RBP39.18■■■■□ 3.86
SMAD4-213ENST00000591914 TULP4Q9NRJ4 1543 aa39.18■■■■□ 3.86
SMAD4-213ENST00000591914 COL22A1Q8NFW1 1626 aaPredicted RBP39.18■■■■□ 3.86
SMAD4-213ENST00000591914 POTEAQ6S8J7 498 aa39.15■■■■□ 3.86
SMAD4-213ENST00000591914 PRR36Q9H6K5 1346 aa39.13■■■■□ 3.85
SMAD4-213ENST00000591914 KRT28Q7Z3Y7 464 aa39.09■■■■□ 3.85
SMAD4-213ENST00000591914 SPATA31A3Q5VYP0 1347 aa39.07■■■■□ 3.84
SMAD4-213ENST00000591914 TONSLQ96HA7 1378 aa39.06■■■■□ 3.84
SMAD4-213ENST00000591914 PMFBP1Q8TBY8 1022 aa39.05■■■■□ 3.84
SMAD4-213ENST00000591914 CENPJQ9HC77 1338 aaPredicted RBP39.05■■■■□ 3.84
SMAD4-213ENST00000591914 ATP7BP35670 1465 aa39.05■■■■□ 3.84
SMAD4-213ENST00000591914 NBPF8Q3BBV2 869 aa39.04■■■■□ 3.84
SMAD4-213ENST00000591914 ZNF772Q68DY9 489 aaPredicted RBP39.04■■■■□ 3.84
SMAD4-213ENST00000591914 ROCK2O75116 1388 aaKnown RBP39.04■■■■□ 3.84
SMAD4-213ENST00000591914 PSME1Q06323 249 aa39.03■■■■□ 3.84
SMAD4-213ENST00000591914 ITSN1Q15811 1721 aa39.01■■■■□ 3.84
SMAD4-213ENST00000591914 SBNO1A3KN83 1393 aa39.01■■■■□ 3.84
SMAD4-213ENST00000591914 CDK19Q9BWU1 502 aa39.01■■■■□ 3.84
SMAD4-213ENST00000591914 QRICH2Q9H0J4 1663 aa39■■■■□ 3.83
SMAD4-213ENST00000591914 TNS3Q68CZ2 1445 aa39■■■■□ 3.83
SMAD4-213ENST00000591914 AFF2P51816 1311 aa38.99■■■■□ 3.83
SMAD4-213ENST00000591914 ADAMTS2O95450 1211 aa38.99■■■■□ 3.83
SMAD4-213ENST00000591914 NUDT16Q96DE0 195 aaKnown RBP38.99■■■■□ 3.83
SMAD4-213ENST00000591914 C8orf37Q96NL8 207 aa38.99■■■■□ 3.83
SMAD4-213ENST00000591914 GPRASP1Q5JY77 1395 aa38.98■■■■□ 3.83
SMAD4-213ENST00000591914 TOPAZ1Q8N9V7 1692 aa38.95■■■■□ 3.83
SMAD4-213ENST00000591914 TRPM3Q9HCF6 1732 aaPredicted RBP38.94■■■■□ 3.82
SMAD4-213ENST00000591914 NGLY1Q96IV0 654 aa38.91■■■■□ 3.82
SMAD4-213ENST00000591914 MARF1Q9Y4F3 1742 aaKnown RBP38.91■■■■□ 3.82
SMAD4-213ENST00000591914 PCGF6Q9BYE7 350 aa38.9■■■■□ 3.82
SMAD4-213ENST00000591914 ARHGEF10O15013 1369 aa38.9■■■■□ 3.82
SMAD4-213ENST00000591914 RALGAPBQ86X10 1494 aa38.9■■■■□ 3.82
SMAD4-213ENST00000591914 NGDNQ8NEJ9 315 aaKnown RBP38.89■■■■□ 3.82
SMAD4-213ENST00000591914 CCDC61Q9Y6R9 512 aa38.88■■■■□ 3.81
SMAD4-213ENST00000591914 ALS2Q96Q42 1657 aa38.86■■■■□ 3.81
SMAD4-213ENST00000591914 SRPK2P78362 688 aaKnown RBP38.84■■■■□ 3.81
SMAD4-213ENST00000591914 FNBP4Q8N3X1 1017 aaPredicted RBP38.84■■■■□ 3.81
SMAD4-213ENST00000591914 POLR3AO14802 1390 aaPredicted RBP38.83■■■■□ 3.81
SMAD4-213ENST00000591914 PLEKHG3A1L390 1219 aa38.82■■■■□ 3.8
SMAD4-213ENST00000591914 LMOD2Q6P5Q4 547 aa38.82■■■■□ 3.8
SMAD4-213ENST00000591914 ABCA3Q99758 1704 aa38.82■■■■□ 3.8
SMAD4-213ENST00000591914 CARD11Q9BXL7 1154 aa38.81■■■■□ 3.8
SMAD4-213ENST00000591914 RXRBP28702 533 aa38.8■■■■□ 3.8
SMAD4-213ENST00000591914 CABP2Q9NPB3 220 aa38.8■■■■□ 3.8
SMAD4-213ENST00000591914 CABLES1Q8TDN4 633 aa38.78■■■■□ 3.8
SMAD4-213ENST00000591914 QTRT2Q9H974 415 aaKnown RBP38.78■■■■□ 3.8
SMAD4-213ENST00000591914 USP21Q9UK80 565 aa38.78■■■■□ 3.8
SMAD4-213ENST00000591914 ACEP12821 1306 aa38.78■■■■□ 3.8
SMAD4-213ENST00000591914 EVC2Q86UK5 1308 aa38.77■■■■□ 3.8
SMAD4-213ENST00000591914 CLSPNQ9HAW4 1339 aa38.77■■■■□ 3.8
SMAD4-213ENST00000591914 PPIP5K1Q6PFW1 1433 aa38.77■■■■□ 3.8
SMAD4-213ENST00000591914 CDK12Q9NYV4 1490 aaPredicted RBP38.74■■■■□ 3.79
SMAD4-213ENST00000591914 BCL9LQ86UU0 1499 aa38.73■■■■□ 3.79
SMAD4-213ENST00000591914 SBNO2Q9Y2G9 1366 aa38.73■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms