RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 MST1RQ04912 1400 aa29.62■■■□□ 2.33
ERCC2-212ENST00000591309 DLC1Q96QB1 1528 aa29.61■■■□□ 2.33
ERCC2-212ENST00000591309 BRINP3Q76B58 766 aa29.59■■■□□ 2.33
ERCC2-212ENST00000591309 KIAA1210Q9ULL0 1709 aa29.59■■■□□ 2.33
ERCC2-212ENST00000591309 NBPF1Q3BBV0 1214 aa29.57■■■□□ 2.32
ERCC2-212ENST00000591309 CDC42BPGQ6DT37 1551 aa29.56■■■□□ 2.32
ERCC2-212ENST00000591309 C1orf167Q5SNV9 1468 aa29.55■■■□□ 2.32
ERCC2-212ENST00000591309 CLSPNQ9HAW4 1339 aa29.54■■■□□ 2.32
ERCC2-212ENST00000591309 NUTM2FA1L443 756 aa29.54■■■□□ 2.32
ERCC2-212ENST00000591309 CCER1Q8TC90 406 aaPredicted RBP29.53■■■□□ 2.32
ERCC2-212ENST00000591309 ESCO1Q5FWF5 840 aa29.52■■■□□ 2.32
ERCC2-212ENST00000591309 PHLPP1O60346 1717 aa29.51■■■□□ 2.32
ERCC2-212ENST00000591309 MINK1Q8N4C8 1332 aaPredicted RBP29.5■■■□□ 2.31
ERCC2-212ENST00000591309 ORAI2Q96SN7 254 aa29.5■■■□□ 2.31
ERCC2-212ENST00000591309 ROCK2O75116 1388 aaKnown RBP29.5■■■□□ 2.31
ERCC2-212ENST00000591309 HIRIP3Q9BW71 556 aaPredicted RBP29.48■■■□□ 2.31
ERCC2-212ENST00000591309 AHDC1Q5TGY3 1603 aaPredicted RBP29.45■■■□□ 2.31
ERCC2-212ENST00000591309 NBPF8Q3BBV2 869 aa29.45■■■□□ 2.31
ERCC2-212ENST00000591309 ARHGEF28Q8N1W1 1705 aaKnown RBP29.43■■■□□ 2.3
ERCC2-212ENST00000591309 EIF3AQ14152 1382 aaKnown RBP29.43■■■□□ 2.3
ERCC2-212ENST00000591309 TRPM1Q7Z4N2 1603 aa29.43■■■□□ 2.3
ERCC2-212ENST00000591309 JCADQ9P266 1359 aa29.42■■■□□ 2.3
ERCC2-212ENST00000591309 FMN2Q9NZ56 1722 aa29.42■■■□□ 2.3
ERCC2-212ENST00000591309 WASLO00401 505 aaPredicted RBP29.41■■■□□ 2.3
ERCC2-212ENST00000591309 DDX17Q92841 729 aaKnown RBP29.41■■■□□ 2.3
ERCC2-212ENST00000591309 LRRC59Q96AG4 307 aaKnown RBP29.41■■■□□ 2.3
ERCC2-212ENST00000591309 CENPJQ9HC77 1338 aaPredicted RBP29.41■■■□□ 2.3
ERCC2-212ENST00000591309 DISP3Q9P2K9 1392 aa29.4■■■□□ 2.3
ERCC2-212ENST00000591309 TIMELESSQ9UNS1 1208 aa29.4■■■□□ 2.3
ERCC2-212ENST00000591309 NPHP3Q7Z494 1330 aa29.4■■■□□ 2.3
ERCC2-212ENST00000591309 COL16A1Q07092 1604 aaPredicted RBP29.39■■■□□ 2.3
ERCC2-212ENST00000591309 CARD11Q9BXL7 1154 aa29.38■■■□□ 2.29
ERCC2-212ENST00000591309 ADGRB2O60241 1585 aa29.38■■■□□ 2.29
ERCC2-212ENST00000591309 NHSL1Q5SYE7 1610 aa29.37■■■□□ 2.29
ERCC2-212ENST00000591309 FOXO3O43524 673 aa29.36■■■□□ 2.29
ERCC2-212ENST00000591309 PHF8Q9UPP1 1060 aa29.36■■■□□ 2.29
ERCC2-212ENST00000591309 ANKARQ7Z5J8 1434 aa29.36■■■□□ 2.29
ERCC2-212ENST00000591309 PHF23Q9BUL5 403 aaPredicted RBP29.34■■■□□ 2.29
ERCC2-212ENST00000591309 CDK19Q9BWU1 502 aa29.33■■■□□ 2.29
ERCC2-212ENST00000591309 SOS2Q07890 1332 aaPredicted RBP29.32■■■□□ 2.28
ERCC2-212ENST00000591309 MED1Q15648 1581 aaPredicted RBP29.31■■■□□ 2.28
ERCC2-212ENST00000591309 RALGAPBQ86X10 1494 aa29.31■■■□□ 2.28
ERCC2-212ENST00000591309 GPRASP1Q5JY77 1395 aa29.31■■■□□ 2.28
ERCC2-212ENST00000591309 SPATA31A6Q5VVP1 1343 aa29.3■■■□□ 2.28
ERCC2-212ENST00000591309 TULP4Q9NRJ4 1543 aa29.3■■■□□ 2.28
ERCC2-212ENST00000591309 KIF1AQ12756 1690 aa29.29■■■□□ 2.28
ERCC2-212ENST00000591309 PMFBP1Q8TBY8 1022 aa29.29■■■□□ 2.28
ERCC2-212ENST00000591309 SRPK2P78362 688 aaKnown RBP29.28■■■□□ 2.28
ERCC2-212ENST00000591309 XPCQ01831 940 aaPredicted RBP29.28■■■□□ 2.28
ERCC2-212ENST00000591309 PSME1Q06323 249 aa29.28■■■□□ 2.28
ERCC2-212ENST00000591309 NUDT16Q96DE0 195 aaKnown RBP29.27■■■□□ 2.28
ERCC2-212ENST00000591309 MEX3CQ5U5Q3 659 aaKnown RBP29.26■■■□□ 2.27
ERCC2-212ENST00000591309 KRT28Q7Z3Y7 464 aa29.26■■■□□ 2.27
ERCC2-212ENST00000591309 RGPD8O14715 1765 aaPredicted RBP29.26■■■□□ 2.27
ERCC2-212ENST00000591309 NUTM2BA6NNL0 878 aaPredicted RBP29.25■■■□□ 2.27
ERCC2-212ENST00000591309 NUTM2EB1AL46 878 aaPredicted RBP29.25■■■□□ 2.27
ERCC2-212ENST00000591309 NUTM2AQ8IVF1 878 aaPredicted RBP29.25■■■□□ 2.27
ERCC2-212ENST00000591309 PRR36Q9H6K5 1346 aa29.24■■■□□ 2.27
ERCC2-212ENST00000591309 NGDNQ8NEJ9 315 aaKnown RBP29.24■■■□□ 2.27
ERCC2-212ENST00000591309 QRICH2Q9H0J4 1663 aa29.24■■■□□ 2.27
ERCC2-212ENST00000591309 EVC2Q86UK5 1308 aa29.23■■■□□ 2.27
ERCC2-212ENST00000591309 SHPRHQ149N8 1683 aa29.23■■■□□ 2.27
ERCC2-212ENST00000591309 PNPLA6Q8IY17 1366 aa29.22■■■□□ 2.27
ERCC2-212ENST00000591309 USP32Q8NFA0 1604 aa29.21■■■□□ 2.27
ERCC2-212ENST00000591309 CCDC61Q9Y6R9 512 aa29.21■■■□□ 2.27
ERCC2-212ENST00000591309 PXDNQ92626 1479 aa29.2■■■□□ 2.26
ERCC2-212ENST00000591309 CABP2Q9NPB3 220 aa29.19■■■□□ 2.26
ERCC2-212ENST00000591309 ATP7BP35670 1465 aa29.17■■■□□ 2.26
ERCC2-212ENST00000591309 LMOD2Q6P5Q4 547 aa29.16■■■□□ 2.26
ERCC2-212ENST00000591309 ITSN1Q15811 1721 aa29.16■■■□□ 2.26
ERCC2-212ENST00000591309 SPATA31A3Q5VYP0 1347 aa29.14■■■□□ 2.25
ERCC2-212ENST00000591309 SBNO1A3KN83 1393 aa29.12■■■□□ 2.25
ERCC2-212ENST00000591309 SLC24A1O60721 1099 aa29.11■■■□□ 2.25
ERCC2-212ENST00000591309 PLEKHG3A1L390 1219 aa29.1■■■□□ 2.25
ERCC2-212ENST00000591309 PAK3O75914 559 aaPredicted RBP29.1■■■□□ 2.25
ERCC2-212ENST00000591309 SBNO2Q9Y2G9 1366 aa29.1■■■□□ 2.25
ERCC2-212ENST00000591309 TNS3Q68CZ2 1445 aa29.1■■■□□ 2.25
ERCC2-212ENST00000591309 LRP6O75581 1613 aa29.09■■■□□ 2.25
ERCC2-212ENST00000591309 HAP1P54257 671 aaPredicted RBP29.09■■■□□ 2.25
ERCC2-212ENST00000591309 ACEP12821 1306 aa29.09■■■□□ 2.25
ERCC2-212ENST00000591309 PPIP5K1Q6PFW1 1433 aa29.09■■■□□ 2.25
ERCC2-212ENST00000591309 ST20-MTHFSA0A0A6YYL1 179 aa29.08■■■□□ 2.25
ERCC2-212ENST00000591309 ADAMTS2O95450 1211 aa29.08■■■□□ 2.25
ERCC2-212ENST00000591309 ARHGEF10O15013 1369 aa29.08■■■□□ 2.25
ERCC2-212ENST00000591309 CABP1Q9NZU7 370 aa29.06■■■□□ 2.24
ERCC2-212ENST00000591309 ATAD2Q6PL18 1390 aa29.05■■■□□ 2.24
ERCC2-212ENST00000591309 USP47Q96K76 1375 aa29.05■■■□□ 2.24
ERCC2-212ENST00000591309 PLEKHG5O94827 1062 aa29.05■■■□□ 2.24
ERCC2-212ENST00000591309 C8orf37Q96NL8 207 aa29.04■■■□□ 2.24
ERCC2-212ENST00000591309 POLR3AO14802 1390 aaPredicted RBP29.03■■■□□ 2.24
ERCC2-212ENST00000591309 TOPAZ1Q8N9V7 1692 aa29.03■■■□□ 2.24
ERCC2-212ENST00000591309 COL22A1Q8NFW1 1626 aaPredicted RBP29.02■■■□□ 2.24
ERCC2-212ENST00000591309 ZNF772Q68DY9 489 aaPredicted RBP29.02■■■□□ 2.24
ERCC2-212ENST00000591309 NGLY1Q96IV0 654 aa29.02■■■□□ 2.24
ERCC2-212ENST00000591309 RGS17Q9UGC6 210 aaPredicted RBP28.99■■■□□ 2.23
ERCC2-212ENST00000591309 TMC1Q8TDI8 760 aa28.98■■■□□ 2.23
ERCC2-212ENST00000591309 TMF1P82094 1093 aa28.97■■■□□ 2.23
ERCC2-212ENST00000591309 TESK2Q96S53 571 aa28.97■■■□□ 2.23
ERCC2-212ENST00000591309 AFF2P51816 1311 aa28.96■■■□□ 2.23
ERCC2-212ENST00000591309 ILDR2Q71H61 639 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms